prot_F-serratus_M_contig92.20593.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig92.20593.1
Unique Nameprot_F-serratus_M_contig92.20593.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length441
Homology
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BLAST of mRNA_F-serratus_M_contig92.20593.1 vs. uniprot
Match: D8LTK9_ECTSI (Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK9_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 8.030e-64
Identity = 140/297 (47.14%), Postives = 180/297 (60.61%), Query Frame = 0 
Query:  125 VGQRNWRELTPFGEARMNNRTDLANFLSKSFVRVINPLPSDSDRKPGST----YNDAY-----------WDEEMEEQAKDWEQAWDEESQRFYFFNRVTCETSFTIPFRATARRVEELRAGAEVPYRRKVAAVMAPDLMSLAEYREARREARLELNELMLRSSSATAIQSGWRGWLARNAASCLRRERRLLLVVQRTARRILKRHRRKRLELFTASCIVLQRSVRGYQTRCKYRRRLTRFRRMCTEGTLNNLATEVYRGHLYGRKVARKRRAQRAALDWGSTEWKHRRLHGFTPTET 406
            +GQRNW+E TPFGEARMNN + +A FLS SFVR+    PS       ST     +DA            WD+EME++ + WE  WD++ QRFY+ N  T ETS+T PF+ +A RVEELR GAEV Y RKVA V    L+ L++YREA +E + EL+   LR  +A  IQS WR  +AR  A+  R+ERR   V+ R  RR L R RRKRL    ++C++LQ+ VRG   R ++R      +R+    TLN L T VYRGHLYGR+ AR+ RAQR A  WG +EW+  R     P  T
Sbjct:  244 IGQRNWQEYTPFGEARMNNHSQVAEFLSGSFVRLGGKGPSLGGNNGASTTIAELDDAQXXXQGGNEARGWDKEMEDKVQGWETEWDQDKQRFYYVNAETGETSYTAPFKISADRVEELREGAEVEYLRKVAPVNGESLLGLSDYREAFQEEKTELDTHKLRHQAAVVIQSCWRARMARIEANRRRKERRCASVINRQMRRFLGRCRRKRLGQVMSACLMLQKIVRGCMARRRHREGEAEMKRLRDANTLNRLVTRVYRGHLYGRRPARQLRAQREASWWGPSEWEAARHDAGDPLRT 540
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig92.20593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTK9_ECTSI8.030e-6447.14Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 250..270
NoneNo IPR availablePFAMPF13637Ank_4coord: 33..86
e-value: 4.4E-11
score: 43.1
NoneNo IPR availableGENE3D1.20.5.190coord: 271..342
e-value: 3.8E-5
score: 25.4
NoneNo IPR availableGENE3D2.20.70.10coord: 178..225
e-value: 4.0E-7
score: 31.4
NoneNo IPR availablePANTHERPTHR24121NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATEDcoord: 2..120
NoneNo IPR availablePANTHERPTHR24121:SF2NO MECHANORECEPTOR POTENTIAL C, ISOFORM Hcoord: 2..120
NoneNo IPR availablePANTHERPTHR24121:SF2NO MECHANORECEPTOR POTENTIAL C, ISOFORM Hcoord: 30..153
NoneNo IPR availablePANTHERPTHR24121NO MECHANORECEPTOR POTENTIAL C, ISOFORM D-RELATEDcoord: 30..153
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 81..95
score: 36.64
coord: 33..48
score: 43.98
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1..28
e-value: 49.0
score: 12.8
coord: 32..61
e-value: 1.8E-4
score: 30.8
coord: 65..94
e-value: 1.4E-4
score: 31.2
coord: 98..127
e-value: 7.3
score: 15.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 1..30
e-value: 3.1E-4
score: 21.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..31
score: 9.03
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 32..64
score: 12.502
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 98..130
score: 9.057
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 65..97
score: 12.529
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 404..426
e-value: 2.4
score: 17.1
coord: 321..343
e-value: 0.017
score: 24.3
coord: 269..291
e-value: 0.084
score: 22.0
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 406..426
e-value: 0.011
score: 15.5
coord: 272..288
e-value: 9.7E-5
score: 21.8
coord: 324..343
e-value: 0.0011
score: 18.5
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 405..434
score: 7.785
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 270..298
score: 8.663
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 323..351
score: 8.645
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..158
e-value: 1.2E-40
score: 141.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..152
IPR001202WW domainPFAMPF00397WWcoord: 189..216
e-value: 1.9E-6
score: 27.8
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 190..216
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 184..218
score: 8.749
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..151
score: 40.478
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 184..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig92contigF-serratus_M_contig92:531400..539744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig92.20593.1mRNA_F-serratus_M_contig92.20593.1Fucus serratus malemRNAF-serratus_M_contig92 530528..540167 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig92.20593.1 ID=prot_F-serratus_M_contig92.20593.1|Name=mRNA_F-serratus_M_contig92.20593.1|organism=Fucus serratus male|type=polypeptide|length=441bp
MTPLMCAVSGGHKYSTSLLCDYGANLDLVDMSGRTALHVAAQGGRADVLQ
EILGRDVDVNAKDLQGETALHISAYFENEEVAQTLLESGANPNLQNVRGD
GAAHIASRTGNAKVVEALVEYDAHVGQRNWRELTPFGEARMNNRTDLANF
LSKSFVRVINPLPSDSDRKPGSTYNDAYWDEEMEEQAKDWEQAWDEESQR
FYFFNRVTCETSFTIPFRATARRVEELRAGAEVPYRRKVAAVMAPDLMSL
AEYREARREARLELNELMLRSSSATAIQSGWRGWLARNAASCLRRERRLL
LVVQRTARRILKRHRRKRLELFTASCIVLQRSVRGYQTRCKYRRRLTRFR
RMCTEGTLNNLATEVYRGHLYGRKVARKRRAQRAALDWGSTEWKHRRLHG
FTPTETQASITLQKAWRAKVAREQFHLLLRAQKTCKIVLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR000048IQ_motif_EF-hand-BS
IPR036770Ankyrin_rpt-contain_sf
IPR001202WW_dom
IPR020683Ankyrin_rpt-contain_dom
IPR036020WW_dom_sf