prot_F-serratus_M_contig918.20579.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig918.20579.1
Unique Nameprot_F-serratus_M_contig918.20579.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length115
Homology
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BLAST of mRNA_F-serratus_M_contig918.20579.1 vs. uniprot
Match: D7G7B7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B7_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 4.360e-14
Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 0 
Query:   67 MTLVLVVGLVAVGILSAFAYRWWLKTSTGDDDIEVDGNMRTRIRHGGL 114
            M+L+++ G++A G+LS  AYR WLK +  DDD+E+DG MRTRIRHGGL
Sbjct:    1 MSLIVIAGVLAAGLLSVGAYRLWLKATADDDDVEIDGTMRTRIRHGGL 48
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig918.20579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7B7_ECTSI4.360e-1460.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..63
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 64..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig918contigF-serratus_M_contig918:329132..337100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig918.20579.1mRNA_F-serratus_M_contig918.20579.1Fucus serratus malemRNAF-serratus_M_contig918 328067..337100 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig918.20579.1 ID=prot_F-serratus_M_contig918.20579.1|Name=mRNA_F-serratus_M_contig918.20579.1|organism=Fucus serratus male|type=polypeptide|length=115bp
SSLILSIYDCVSLYHLFALKLYLAKIRIERKASRHIKVIVAQSHTVFDSP
RTTTTTVKEKPRRAFAMTLVLVVGLVAVGILSAFAYRWWLKTSTGDDDIE
VDGNMRTRIRHGGL*
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