prot_F-serratus_M_contig91.20496.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig91.20496.1
Unique Nameprot_F-serratus_M_contig91.20496.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length203
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig91.20496.1 vs. uniprot
Match: A0A6H5K714_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K714_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 6.420e-46
Identity = 105/200 (52.50%), Postives = 125/200 (62.50%), Query Frame = 0 
Query:    1 MERKFHGKSGGRIRRTHEGSGTGGGDE---------GAGTGARGVELAAASRRRTMMPVVPWRRPGLYQEGVVHEFVMTLEVESSEAKVQAARTRAGLEVVYLSSGDIPPSPAEPDAASFLPADGTHSSPYKIPFYMEAELEQMQADXXXXXXXXXXXXXXXQNSRIPPPPRLTYEQMKALETALATVDPHAAAALRSRF 191
            MERKFHGKSGGR +   +      GDE                        +R+ M+  VPWRRPG Y++GVVHE V+ LEVESSEA+ Q ARTRAGLE VYLSSGDIP +PAEPDAASFLP D      YKIPFYME+ELEQMQA+                 +  P P ++T +Q++AL+ ALA+VDPHAA ALRSRF
Sbjct:  657 MERKFHGKSGGRSKGKSDHGRASAGDEEXXXXXXXXXXXXXXXXXXXXXXXKRKPMVTAVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQM--YKIPFYMESELEQMQAEALKEQQQQQAP------ANQPGPVKVTLQQVRALDDALASVDPHAATALRSRF 848
[Close]
BLAST of mRNA_F-serratus_M_contig91.20496.1 vs. uniprot
Match: D8LNV8_ECTSI (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV8_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.180e-43
Identity = 90/149 (60.40%), Postives = 108/149 (72.48%), Query Frame = 0 
Query:   43 RRRTMMPVVPWRRPGLYQEGVVHEFVMTLEVESSEAKVQAARTRAGLEVVYLSSGDIPPSPAEPDAASFLPADGTHSSPYKIPFYMEAELEQMQADXXXXXXXXXXXXXXXQNSRIPPPPRLTYEQMKALETALATVDPHAAAALRSRF 191
            +R+ M+  VPWRRPG Y++GVVHE V+ LEVESSEA+ Q ARTRAGLE VYLSSGDIP +PAEPDAASFLP D      YKIPFYME+ELEQMQA+                 +  P P ++T +Q++AL+ ALA+VDPHAA ALRSRF
Sbjct:  499 KRKPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQM--YKIPFYMESELEQMQAEAPKEQQQQQPP------ANQPGPVKVTLQQVRALDDALASVDPHAATALRSRF 639
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig91.20496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K714_9PHAE6.420e-4652.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNV8_ECTSI1.180e-4360.40TFIIS N-terminal domain-containing protein (Fragme... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig91contigF-serratus_M_contig91:53719..60860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig91.20496.1mRNA_F-serratus_M_contig91.20496.1Fucus serratus malemRNAF-serratus_M_contig91 52524..61249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig91.20496.1 ID=prot_F-serratus_M_contig91.20496.1|Name=mRNA_F-serratus_M_contig91.20496.1|organism=Fucus serratus male|type=polypeptide|length=203bp
MERKFHGKSGGRIRRTHEGSGTGGGDEGAGTGARGVELAAASRRRTMMPV
VPWRRPGLYQEGVVHEFVMTLEVESSEAKVQAARTRAGLEVVYLSSGDIP
PSPAEPDAASFLPADGTHSSPYKIPFYMEAELEQMQADQKQEKEQQLQEK
ERQQNSRIPPPPRLTYEQMKALETALATVDPHAAAALRSRFPRNLASSRP
CS*
back to top