mRNA_F-serratus_M_contig91.20496.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig91.20496.1
Unique NamemRNA_F-serratus_M_contig91.20496.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig91.20496.1 vs. uniprot
Match: A0A6H5K714_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K714_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 2.860e-59
Identity = 142/267 (53.18%), Postives = 168/267 (62.92%), Query Frame = 3 
Query:  189 GEEGGWADRAGKILQIVKEFHPEDAALVVSEELQEETPGANEAAAFLQHXXXXXXKHWAERVKRERKMERKFHGKSGGRIRRTHEGSGTGGGDE---------GAGTGARGVELAAASRRRTMMPVVPWRRPGLYQEGVVHEFVMTLEVESSEAKVQAARTRAGLEVVYLSSGDIPPSPAEPDAASFLPADGTHSSPYKIPFYMEAELEQMQADXXXXXXXXXXXXXXXQNSRIPPPPRLTYEQMKALETALATVDPHAAAALRSRF 962
            G++ GWADRAG+ LQ+VKEFH EDAA  VSE  QE       AA    H      +HWAERVKRER+MERKFHGKSGGR +   +      GDE                        +R+ M+  VPWRRPG Y++GVVHE V+ LEVESSEA+ Q ARTRAGLE VYLSSGDIP +PAEPDAASFLP D      YKIPFYME+ELEQMQA+                 +  P P ++T +Q++AL+ ALA+VDPHAA ALRSRF
Sbjct:  594 GKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQESDSVV--AATMASHHAGH--RHWAERVKREREMERKFHGKSGGRSKGKSDHGRASAGDEEXXXXXXXXXXXXXXXXXXXXXXXKRKPMVTAVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQM--YKIPFYMESELEQMQAEALKEQQQQQAP------ANQPGPVKVTLQQVRALDDALASVDPHAATALRSRF 848
[Close]
BLAST of mRNA_F-serratus_M_contig91.20496.1 vs. uniprot
Match: D8LNV8_ECTSI (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV8_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 3.960e-54
Identity = 138/290 (47.59%), Postives = 165/290 (56.90%), Query Frame = 3 
Query:  189 GEEGGWADRAGKILQ---------------------IVKEFHPEDAALVVSEELQEETPGANEAAAFLQHXXXXXXKHWAERVKRERKMERKFHGKSGGRIRRTHEGSGTGGGDEGAGTGARGVELAAA-----------SRRRTMMPVVPWRRPGLYQEGVVHEFVMTLEVESSEAKVQAARTRAGLEVVYLSSGDIPPSPAEPDAASFLPADGTHSSPYKIPFYMEAELEQMQADXXXXXXXXXXXXXXXQNSRIPPPPRLTYEQMKALETALATVDPHAAAALRSRF 962
            G++ GWADRAG+ LQ                     +VKEFH EDAA  VSE  QE    ++  AA          +HWAERVKRER+MERKFHGKSGGR +                                       +R+ M+  VPWRRPG Y++GVVHE V+ LEVESSEA+ Q ARTRAGLE VYLSSGDIP +PAEPDAASFLP D      YKIPFYME+ELEQMQA+                 +  P P ++T +Q++AL+ ALA+VDPHAA ALRSRF
Sbjct:  362 GKKVGWADRAGRTLQESVEGRRLMLMNHPGTRRALQVVKEFHSEDAATAVSETPQE----SDSVAATTMASHHAGHRHWAERVKREREMERKFHGKSGGRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKRKPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQM--YKIPFYMESELEQMQAEAPKEQQQQQPP------ANQPGPVKVTLQQVRALDDALASVDPHAATALRSRF 639
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig91.20496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K714_9PHAE2.860e-5953.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNV8_ECTSI3.960e-5447.59TFIIS N-terminal domain-containing protein (Fragme... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig91contigF-serratus_M_contig91:52524..61249 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size2193
Cds size609
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig91.20496.1prot_F-serratus_M_contig91.20496.1Fucus serratus malepolypeptideF-serratus_M_contig91 53719..60860 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932644.5527449-UTR-F-serratus_M_contig91:52523..537181622932644.5527449-UTR-F-serratus_M_contig91:52523..53718Fucus serratus maleUTRF-serratus_M_contig91 52524..53718 -
1690964401.5359435-UTR-F-serratus_M_contig91:52523..537181690964401.5359435-UTR-F-serratus_M_contig91:52523..53718Fucus serratus maleUTRF-serratus_M_contig91 52524..53718 -
1622932644.6535535-UTR-F-serratus_M_contig91:60860..612491622932644.6535535-UTR-F-serratus_M_contig91:60860..61249Fucus serratus maleUTRF-serratus_M_contig91 60861..61249 -
1690964401.587873-UTR-F-serratus_M_contig91:60860..612491690964401.587873-UTR-F-serratus_M_contig91:60860..61249Fucus serratus maleUTRF-serratus_M_contig91 60861..61249 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932644.5744047-CDS-F-serratus_M_contig91:53718..538441622932644.5744047-CDS-F-serratus_M_contig91:53718..53844Fucus serratus maleCDSF-serratus_M_contig91 53719..53844 -
1690964401.547221-CDS-F-serratus_M_contig91:53718..538441690964401.547221-CDS-F-serratus_M_contig91:53718..53844Fucus serratus maleCDSF-serratus_M_contig91 53719..53844 -
1622932644.595731-CDS-F-serratus_M_contig91:57254..573941622932644.595731-CDS-F-serratus_M_contig91:57254..57394Fucus serratus maleCDSF-serratus_M_contig91 57255..57394 -
1690964401.5571036-CDS-F-serratus_M_contig91:57254..573941690964401.5571036-CDS-F-serratus_M_contig91:57254..57394Fucus serratus maleCDSF-serratus_M_contig91 57255..57394 -
1622932644.6143548-CDS-F-serratus_M_contig91:58773..588431622932644.6143548-CDS-F-serratus_M_contig91:58773..58843Fucus serratus maleCDSF-serratus_M_contig91 58774..58843 -
1690964401.5668716-CDS-F-serratus_M_contig91:58773..588431690964401.5668716-CDS-F-serratus_M_contig91:58773..58843Fucus serratus maleCDSF-serratus_M_contig91 58774..58843 -
1622932644.6329656-CDS-F-serratus_M_contig91:60587..608601622932644.6329656-CDS-F-serratus_M_contig91:60587..60860Fucus serratus maleCDSF-serratus_M_contig91 60588..60860 -
1690964401.5771022-CDS-F-serratus_M_contig91:60587..608601690964401.5771022-CDS-F-serratus_M_contig91:60587..60860Fucus serratus maleCDSF-serratus_M_contig91 60588..60860 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig91.20496.1

>prot_F-serratus_M_contig91.20496.1 ID=prot_F-serratus_M_contig91.20496.1|Name=mRNA_F-serratus_M_contig91.20496.1|organism=Fucus serratus male|type=polypeptide|length=203bp
MERKFHGKSGGRIRRTHEGSGTGGGDEGAGTGARGVELAAASRRRTMMPV
VPWRRPGLYQEGVVHEFVMTLEVESSEAKVQAARTRAGLEVVYLSSGDIP
PSPAEPDAASFLPADGTHSSPYKIPFYMEAELEQMQADQKQEKEQQLQEK
ERQQNSRIPPPPRLTYEQMKALETALATVDPHAAAALRSRFPRNLASSRP
CS*
back to top

mRNA from alignment at F-serratus_M_contig91:52524..61249-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig91.20496.1 ID=mRNA_F-serratus_M_contig91.20496.1|Name=mRNA_F-serratus_M_contig91.20496.1|organism=Fucus serratus male|type=mRNA|length=8726bp|location=Sequence derived from alignment at F-serratus_M_contig91:52524..61249- (Fucus serratus male)
GCGACGGCGCCAGCGCCCGCAAAAGCGCCGGCAACTGCATCGGCGGAAGG
AAGCAGCGACGTGGCGATACCGGCGGGGGGCGGGGTTTCAGTTCAGTCCG
CCCCGGGGCCACCTCCTATCGTATCGTTGGACGAGATGGCGTGTGCGGAT
GCCGCAGAGAAGAAGCGCAAGCGGAAGGCGCGACCGGCGGGGAAGAAGGT
GGTTGGGCGGACCGCGCGGGCAAGATATTACAGATCGTGAAGGAGTTCCA
TCCGGAAGACGCGGCCTTGGTGGTGTCGGAGGAGCTTCAGGAGGAGACCC
CGGGAGCCAATGAGGCGGCAGCCTTTCTGCAACATCAGCAGCACCATCAC
CACAAGCACTGGGCTGAGCGGGTCAAGCGCGAGAGGAAGATGGAGAGAAA
GTTCCACGGGAAGTCGGGTGGTAGGATCAGGAGAACTCACGAGGGCAGCG
GAACTGGCGGAGGAGACGAAGGTGCAGGTACGGGGGCGAGAGGGGTGGAG
CTGGCCGCGGCCAGCCGGAGGAGGACAATGATGCCCGTGGTGCCCTGGCG
GCGCCCCGGCCTGTACCAAGAGGGTGTCGTCCACGAGTTCGTCATGACAC
TAGAGGTGGAGTCGAGCGAGGCGAAGGTTCAGGCAGCGAGGACTAGGGCG
GGTCTCGAAGTGGTGAGGGGTTCTTGATCGAGATAAGCGTGGGGGGCGGG
GTGGGGGAGAGGGGTGAAATATTTTGTCTCGACGCAATGTCATCCGGTGC
AGGTCGTGCCGACCTCGAAGTGCTCTGTTTTTCGTTCCTCAACCAGCGTT
TCGTTCCTCGCACGGAGGCGGAGATACCTGACTCGGAGCGTGCCAGCGTG
CAGCGACAATCCCGAGCGCTTTCATGTATCCGCCCGTGCGCGCTGTCGCT
GATTTTCGGCAGAAAGCCGACCTCGCCTTATTACAAGAGGCTCGCACGAG
GAGGATGGGTGGGCTGACTCATCCCCCGTCCCCTGCCCCCCCCCCTGTCT
CTTCACCCTCAACGCCATTTAACATCTTTAACTTCCCCTCTCTCCCCGAC
TTTTCTTGCTTTCTCAACTCTCCGCAATGTAGGTATATCTCTCCAGCGGT
GACATCCCGCCTTCCCCGCCGAACCAGACGCCGCGTCTTTCTTGCCTGCA
GGTAAAACCGCAGCTTCTGCCCCCGCCGCCGTTAGCCACCTTTTCAGTTG
ATTTAGTTGACCTTCATCCTTCTCTCTATCCTGCAGAGTATCAGGGTCAT
TCCTAAGCTTCCCCTGTGTTTATCGGGTTGACCTTGTAGAGACGTCTTCG
CTCAATTCGTCGAAAAATCATTCTTGATTGGGCTAAGCTCTGTGGTAGTA
TTTGTAGGCGGAAGGAAGCAGCGACGTGGCGATACCGGCGGGGGGCGGGG
TTTCAGTCCAGTCCTCCCCGGGGCCACCGCCTATCGTATCGTTGGACGAG
ATGGCGCGTGCGGATGCCGCAGAGAAGAAGCGCAAGCGGAAGGCGCGACC
GGCGGGGAAAAGGGTAGGTTGGGTGGACCGCGCGGGAAAGATATTGCAGA
TCGTGAAGGAGTTCCATCCGGAAGACGCGGCCTTGGTGGTGTCGGAGGAG
CTTCAGGAGGAGACCCCGGGAGCCAATGAGGCGGCAGCCTTGCTGCAACA
TCAGCAACACCATCACCACAAGCACTGGGCTGAGCGGGTCAAGCGCGAGA
GGAAGATGGAGAGAGAGTTCCACGGGAAGTCGGGTGGTAGAATCAGGAGG
ACTCACGAGGGCAGCGGAACTGGCGGAGGAGACGAAGGTGCAGGTACGGG
GGCGAGAGGGGTGGAGCTGGCCGCGGCCAGCCGGAGGAGGACAATGATGC
CCGTGGTGCCCTGGCGGCGCCCCGGCCTGTACCAAGAGGGTGTCGTCCAC
GAGTTCGTCATGACACTAGAGGTGGAGTCGAGCGAGGCGGAGGGCCAGGC
AGCGAGGAATAGGGCGGGTCCCGAAGTGGTGAGGGGTTCTTGATCGAGAT
AAGCGTGGGGGCGGGGTGGGGGAGAGGGGTGAAATATTTTGTCTCGACGC
AATGTCATCCGGTGCAGGTCGTGCCGACCTCGAAGTGCTCTGTTTTTCGT
TCCTCAACCAGCGTTTCGTTCCTCGCACCGGAGGCGGAGATACCTGACTC
GGAGCGTGCCAGCGTGCAGCGACAATCCCGAGCGCTTTCATGTATCCGCC
CGTGCGCGCTGTCGCTGATTTTCGGCAGAAAGCCGACCTCGCCTTATTAC
AAGAGGCTCGCACGAGGGAGGATGGGTGGGCTGACTCATCCCCCGTCCCC
GGCCCCCCCCCCCCCCCCCCGTCTCTTCACCCTCAACGCCATTTAACATC
TTTAACTTCCCCTCTCTCCCCGACTTTTCTTGCTTTCTCAACTCTCCGCA
ATGTAGGTATATCTCTCCAGCGGTGACATCCCGCCTTCCCCCGCCGAACC
AGACGCCGCGTCTTTCTTGCCTGCAGGTAAAACCGCAGCTTCTGCCCCCG
CCGCCGTTAGCCACCTTTTCAGTTGATTTAGTTGACCTTCATCCTTCTCT
CTATCCTGCAGAGTATCAGGGTCATTCCTAAGCTTCCCCTGTGTTTATCG
GGTTGACCTTGTAGAGACGTCTTCGCTCAATTCGTCGAAAAATCATTCTT
GATTGGGCTAAGCTCTGTGGTAGTATTTGTAGGCGGAAGGAAGCAGCGAC
GTGGCGATACCGGCGGGGGGCGGGGTTTCAGTCCAGTCCTCCCCGGGGCC
ACCGCCTATCGTATCGTTGGACGAGATGGCGCGTGCGGATGCCGCAGAGA
AGAAGCGCAAGGGGAAGGCGCGACCGGCGGGGAAAAGGGTGGGTTGGGTG
GACCGCGCGGGAAAGATATTGCAGATCGTGAAGGAGTTCCATCCGGAAGA
CGCGGCCTTGGTGGTGTCGGAGGAGCTTCAGGAGGAGACCCCGGGAGCCA
ATGAGGCGGCAGCCTTGCTGCAACATCAGCAACACCATCACCACAAGCAC
TGGGCTGAGCGGGTCAAGCGCGAGAGGGAGATGGAGAGAGAGTTCCACGG
GAAGTCGGGTGGTAGAATCAGGAGGACTCACGAGGGCAGTGGAACTGGCG
GAGAAGACGAAGGTGCAGGTACGGGGGCGAGAGGGGTGGAGCTGGCCGCG
GCCAGCCGGAGGAGGACAATGATGCCCGTGGTGCCCTGGCGGCGCCCCGG
CCTGTACCAAGAGGGTGTCGTCCACGAGTTCGTCATGACACTAGAGGTGG
AGTCGAGCGAGGCGGAGGGCCAGGCAGCGAGGAATAGGGCGGGTCCCGAA
GTGGTGAGGGGTTCTTGATCGAGATAAGCGTGGGGGGCGGGGTGGGGGAG
AGGGGTGAAATATTTTGTCTCGACGCAATGTCATCCGGTGCAGGTCGTGC
CGACCTCGAAGTGCTCTGTTTTTCGTTCCTCAACCAGCGTTTCGTTCCTC
GCACGGAGGCGGAGATACCTGACTCGGAGCGTGCCAGCGTGCAGCGACAA
TCCCGAGCGCTTTCATGTATCCGCCCGTGCGCGCTGTCGCTGATTTTCGG
CAGAAAGCCGAGCTCGCCTTTTTACAAGAGGCTCGCAAGAGGGAGGATGG
GTGGGCTGACTCATCCCCCGTCCCCTGTCCCCCCCCCCGTCTCTTCACCC
TCAACCCCCTCGACGACCATTTCAATACGGTACGGCATGCAGCGTTAGCG
AGAGAGATTGATTACAGAATCTCCGGCTAAGGCTTTCTATTATGGCATCT
CTGAGGCGTTTAGGCCAGGGGGTGTCCAAAATGACTACTTGGAGCGTTAA
GCCCGATACTTTGTTACAGTTTACAAGCTTGCCCTATCCGGCGCGTTCTT
TGCAGACGGGACTCACTCTAGTCCATACAAGATCCCGTTCTACATGGAGG
CTGAGTTAGAGCAGATGCAGGCCGACCAGAAGCAGGAGAAAGAGCAACAA
CTTCAGGAGAAGGAGCGACAGCAGAATTCACGTATTCCACCCCCGGTACG
TTTCATGTTGGAGGGGGGAAGGGGTGAGATTGTTTTTTCCTTTTTAATCT
GCCATCGGGGACAATCAACAAATGCGATCAATAGGCCACCGATCCCGCCT
GTGTTCACATTAGTAGGGGATGTAGAAGAGGGGATCAACCTCATCTATCC
CCAGTTCAACTTCAGCAGTCCTGCACCTGATGGTTATCATTTATTTTTGG
GTATGGCTATTTGCCCCACCGGTGGGCTATTCTCTTGTTTACCCCCCCAC
CTGGATCTCGCGTCAGAAGACTTGGTTGGTCACAGTACATGCATGGGTAT
GTTAGGGTTAGGGTTAGCTATCATGGGGTCATCGTGCAGCCCAAACGGTC
CTGTCTACGTGATACCACGGCCGGTGAGGTGGTTGGTGTATTCTGGTATG
TATGGCTGTTTGACTTTATATACCAGAAAACACCAACCACCGCACCGGCC
GTAACATCACGTAGACAGGACCATTTGGGCTGCACGATGACCCCATGATA
GCCCTGTGACGCGCCAACACACTCTTGCATGTACTGTAACCAACCGTGTC
TTCTGACGCGAGATCCAGGTGGTGGAGTAAATTTGGGAATGGCCCACCGG
TGGGCCAAATAGCCATTTCCTTTATTTTTTTTGTAAGAAAAACCAGAACG
CACCTATACCTTCTGAGCATCCTCCAGTCAGAAGAAAAAATGTCAAAACG
TTTACAGGTAGGTGGGATCAAAGGCTGCAAATACAAAACCTCTTCATGGC
ATTTAATCGGGTTCCCCTATGGTAGTAACATTGGGTCAACAGTATAATGT
CGGGGAGAAGCCCACCGTTAAACTGTACACTTACATTAATCGCCATGCAG
GGATACCAGAAAAACAGCAAAAAACAATGTAGTAAATCATCAGACATGGT
AGTGATAATATACTGTTACCTAGGCTATAAGGACGAAAACACTACATGGT
ATTTGAATGGCTTCCCCGATGGTAGTAACCATGGGTCAACAGTATTGTCG
AATTTCGCGCGTTCTCACGCTGTCACGCTTTTTCTGCGGACGGAAACTAT
CTTTATTAGTAGTAGTAGTATAGAACAATAGAAACCATCCTAAATAGACT
CAAAACTCAAAACCATTTTTCGCGCTAACGGACTATTATATACTGTAATT
TGTATTACATACACAAGTACGCGGTTGATAACTAACTAGTACTGTTGTAC
TGCTGTTAGACTCGTTCAAGCTTTTTGTGGTCTGATCCTCCAAACAAACA
CTGATTGGTTGATAGGAATAGCTACGTACCTGGTAGTTTTTTGTACTTCG
AACTCCAATTTGAAAAAGGATGTAGAGTGAATTCCAAACGTTTCCAAGGC
CTTTTTTCCTTTTTCATGGCTCCGGTTGTTAGGAAGGTTTTGTTAGTTAA
TTTTTCCTCGCTTTTTCGCCCCCCTTCCTCCCCCGGTCAAGGCAAACACC
GATTCTATGGAACACCAAAAGAGGACGAAAGATAAACTCAAACTAGGCCT
TTACCCATTCCGCTTTTTTTTGTGTGTTTTCTGCAAATGTTTGGGCCGAG
CACTGCTTCAAGGTGGCATTTCTGCTCGTAACATCTGCTTATTTCGGGCT
ATTTCGGGCGGATCTGCTCCCACTTCTGCTCGCTAAAATGTGCCAATTAT
TACTATTTTTGTGTTTGCCCGCTCGATTTCTGCTCGTTGTGTGGTTTCTG
CTTGTTATGTGCTCCAGATACCACATTTTCTGCTCTATGTACAGCGCTTG
TGGCCGTGGTTTTCACAGCGTTCTCAACTTCACGGTTCATGCGCTGGGTG
TTTAGGTGCCATTGTGCATGTTGTATGATATTATGATACTACAGCACCAT
ATTTTATGTCGTTTCTTAGAAGTGGGTCCCTGCCCCCCAGCTCAAACGGT
AGGTACTTGTCCCGTTAACCGGCGCTCGAGCGGGTGCTGTTGGGTAAGCA
GCGGCTTCCTCCGCCTCTTGCTGCCGCTTTTGCATCCGCTTTTCTGCGGC
CGTTTTTTTTTTCTTTGATGTCGTGCTCTGTGTCTGTGCGATCGTAACGG
TGGCGTCCGAGAAAAAGTTGACGATAGTCTTTTGGACAGCTGGACGGGGC
GGGGCGATGGACCCTTCGGCAAACCTTCCGCGTGCTTGGTGGGGAGAGAT
GTTTTCGAGCTTTTGTGGGACTCATCTAGTTCCAGGTCTAGCTCCTCCTC
CTCCTCCTCCTCCTGCTGTTGCACAACGTGCGCTATCTCTACCTCCAGCT
TATGTTGATACTCGACATAGGTGTAAATCGTGTGCCGCACGGATCGGGAT
CCGTAGCTCGCAGACTTGTAGAGCGCTCATGTATTAATAGTGTAGACGTG
TTCTGTGTGTTTGTGTTTGTGGTCTGTGTTTGAAGAAAATACAGAACGCA
CCTAGACCTTCTGAGCATCCCCCAGTCAGGGGAAAAAAATATCAAAACGT
TCAGGTCGGCTCAAAGGCTGCAAATACAAAATCTCTTCATGTTTGTGTTG
TCACATTTTAGAAAATCGCGGGTTTCCGTGTTGCGAGTTTAAGAACAGCA
ACCCGCCCTTAGCCATGTCTACTCTCTACTGTCTACTTGTATTATACCAT
AATACCAGTCATGGTAGTATGGTAGTTTATATGGTATATGATATATTTTG
TGTATTTGCGGTTATGTCATTATTTCTGTCTCCAAATGCTGATAATCGCC
TATTTAAGCACTCTGCGGAGGTGCCCGGAGTCTTATTGCCCCTACTTAAG
TAACTTCCTGACAAAATTGAGGTAGATGTGCTAGCAGCATAACCACTATC
TGCTCGCTCTGCTCGTCATATACTATTAATAGATATGCTCTTTATGATGC
TGTCATGCTTCTGATTTTCTGGAAATGCTTGGAGCAGATCTGGTTCTGCT
TCTTTTTTCGAATCTGCTTTTAGTTCTGCTCGAGCATGACTAAATGTGCC
AATCTGCTCTTTTTTCTGTGAGCAGAATGGGTAAAAGTCTAACTCAAACA
GAACAAGCACCAAAGAACGCCTTAAAATACTATACAAATACCGAACATGC
GGTTCGGTAAGAGGGACTCTGCTAGACCTTCAAATATATGGTGTAAGAAA
CAAGATTCCCCCCCCCATCCGAAAGAGACAAATAATTAGACTTGTACAGT
ACATCGCGCTGGTTACAAAACACATAAAACATGCAGGTTACTAATAACAA
AGCTCTGGAGCTCTATAGCGATATGTAGTATAAAACACGATTGCCAAAAC
AAAAACAAAAAAGCGTCCTGGTTCCATTCCCGGCTAGAGAAGTATTGTAT
TCGATCGAGTCTATGCTGTTATTGTATACTGTCTGTATCTTCATGGGTGA
CCATAATCCTCATATCCCTCCACCACGATTCTCTTGTCAAACCCGAACGA
AGCAGCCGCGGCTCACGTACGAGCAAATGAAAGCCCTCGAGACAGCCCTC
GCCACGGTGGATCCCCACGCCGCCGCCGCCCTCAGGAGTCGTTTTCCCAG
GAACCTCGCCTCCTCCAGGCCCTGCTCGTGACGGAGGGGCAGGTCAACAC
AGTGCTCCTCAGGTGGGTTGCTTTTGACATCATTCTTCTCTTTGGGGGGA
AGTGTATATGTATGTGTGTGTGTTTATAAATTGCACATAACCGCGCAATC
CGGCCCTGTCGTCCTAGCCATTCTATGCCACTCGTATTGATCTTCTTAAG
GGGGGGATTATGGTGCGTATGCGTGTGTTGCACCGGTCGCCCCGGTAGCT
CAGTAGGTACCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCCC
GGCAAACGGGATTTTTCTCATTAAAAACTAAAAACCAAAATGAAAATGCC
CAACGGGTGGAGAACGATTAATTCGTTAGTACACAAAATTCAACTTCACG
GTCGACGACGGAAAAGGAATGGCTGACTCCTTCTTGCGATAAAAATTAAG
GCACGCACCGCAGAAGTAAGGTGGATGACAAATCCTGTGGTACCTTCCTC
CAGTGTGACCCCGGCTGGTACGTCCAACAACTTGATATCCAGAATAGATG
GGAAGAAAACACACACACACACACATGCGTGTGTGCATTCATGAAATTGC
ACATAACTGCGCATTCCAGCCCTGTTGTCATGCTAGTTATTCTCTGTAAT
ACTTACGATGCTCCTCCCAAAGGGGCGATCAACGTTGTATATGTGTGTTG
TGTCTCTACCTAAGCCGTCCATGCTTGCGAGGCTTAAGGAGAGCGGTGTC
TTTTTAGAGCCTCCGCAGGAGAAAGTTTAGGTATCTCCACTTCCTACCTC
TGACGATACGAAGAACGACAACGGAGGTCCCATCCTAGTAAGCTCAGCGA
AAGCCGCCTCACCGGGCACCCATGACCCAACATCGAGCTTCAGTCTCTGC
GTGGAGCGGATGGCAGCAAGCGAGTTCCTAGTAGGCATGTCGACAATGCA
CATGCAACCTGGGACGACACAGTCTCGTCCCAAAATCCATATTAATAGTC
TCTACTGTACTGTATCATCGGTCTTAGACTAATATGTATATATAATCATT
TTTTCATCGTCATTCGGAAGACAGAGAATTTCCAGGACGATATTTTACTG
TCATGAACCTTTCTTTAGGTGGCGGCTATCGCTCGCCCATTTCACATCTC
ACCCAAGAGCTGAACCCTGACGGCCTCCATCCTGCATGAGGATGACGCGA
GTTCTTCTTCCATTTCATGCAGGAGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig91:52524..61249-

>mRNA_F-serratus_M_contig91.20496.1 ID=mRNA_F-serratus_M_contig91.20496.1|Name=mRNA_F-serratus_M_contig91.20496.1|organism=Fucus serratus male|type=CDS|length=1218bp|location=Sequence derived from alignment at F-serratus_M_contig91:52524..61249- (Fucus serratus male)
ATGGAGAGAAAGTTCCACGGGAAGTCGGGTGGTAGGATCAGGAGAACTCA
CGAGGGCAGCGGAACTGGCGGAGGAGACGAAGGTGCAGGTACGGGGGCGA
GAGGGGTGGAGCTGGCCGCGGCCAGCCGGAGGAGGACAATGATGCCCGTG
GTGCCCTGGCGGCGCCCCGGCCTGTACCAAGAGGGTGTCGTCCACGAGTT
CGTCATGACACTAGAGGTGGAGTCGAGCGAGGCGAAGGTTCAGGCAGCGA
GGACTAGGGCGGGTCTCGAAGTGATGGAGAGAAAGTTCCACGGGAAGTCG
GGTGGTAGGATCAGGAGAACTCACGAGGGCAGCGGAACTGGCGGAGGAGA
CGAAGGTGCAGGTACGGGGGCGAGAGGGGTGGAGCTGGCCGCGGCCAGCC
GGAGGAGGACAATGATGCCCGTGGTGCCCTGGCGGCGCCCCGGCCTGTAC
CAAGAGGGTGTCGTCCACGAGTTCGTCATGACACTAGAGGTGGAGTCGAG
CGAGGCGAAGGTTCAGGCAGCGAGGACTAGGGCGGGTCTCGAAGTGGTAT
ATCTCTCCAGCGGTGACATCCCGCCTTCCCCCGCCGAACCAGACGCCGCG
TCTTTCTTGCCTGCAGGTATATCTCTCCAGCGGTGACATCCCGCCTTCCC
CCGCCGAACCAGACGCCGCGTCTTTCTTGCCTGCAGACGGGACTCACTCT
AGTCCATACAAGATCCCGTTCTACATGGAGGCTGAGTTAGAGCAGATGCA
GGCCGACCAGAAGCAGGAGAAAGAGCAACAACTTCAGGAGAAGGAGCGAC
AGCAGAATTCACGTATTCCACCCCCGACGGGACTCACTCTAGTCCATACA
AGATCCCGTTCTACATGGAGGCTGAGTTAGAGCAGATGCAGGCCGACCAG
AAGCAGGAGAAAGAGCAACAACTTCAGGAGAAGGAGCGACAGCAGAATTC
ACGTATTCCACCCCCGCCGCGGCTCACGTACGAGCAAATGAAAGCCCTCG
AGACAGCCCTCGCCACGGTGGATCCCCACGCCGCCGCCGCCCTCAGGAGT
CGTTTTCCCAGGAACCTCGCCTCCTCCAGGCCCTGCTCGTGACCGCGGCT
CACGTACGAGCAAATGAAAGCCCTCGAGACAGCCCTCGCCACGGTGGATC
CCCACGCCGCCGCCGCCCTCAGGAGTCGTTTTCCCAGGAACCTCGCCTCC
TCCAGGCCCTGCTCGTGA
back to top