prot_F-serratus_M_contig90.20405.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig90.20405.1
Unique Name	prot_F-serratus_M_contig90.20405.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	86

Homology

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BLAST of mRNA_F-serratus_M_contig90.20405.1 vs. uniprot
Match: D7FKI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKI6_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 3.070e-30
Identity = 56/85 (65.88%), Postives = 70/85 (82.35%), Query Frame = 0

Query:    4 PTPMLLLVLLAMMVQLIAA---DFEMASGPGTIRRQDRDPFKDGYFNLIIACFALMFCFIACMFGVRLCLGKKRGNTSKSFFLVA 85
            P+ + LLVLLA ++ ++ A   DFE+++G G+IR QDRDPFK+GYFN+II+CFALMF FI CMF VR+CLGKKRGN S SFFLVA
Sbjct:    3 PSMINLLVLLAAVLHMMGAAAEDFEVSTGVGSIRAQDRDPFKEGYFNMIISCFALMFFFIGCMFSVRICLGKKRGNDSHSFFLVA 87

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig90.20405.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig90.20405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FKI6_ECTSI	3.070e-30	65.88	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..44
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 71..85
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 45..70
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..22 score: 0.904
None	No IPR available	TMHMM	TMhelix		coord: 44..66
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig90	contig	F-serratus_M_contig90:626738..626995 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig90.20405.1	mRNA_F-serratus_M_contig90.20405.1	Fucus serratus male	mRNA	F-serratus_M_contig90 625934..628223 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig90.20405.1 ID=prot_F-serratus_M_contig90.20405.1|Name=mRNA_F-serratus_M_contig90.20405.1|organism=Fucus serratus male|type=polypeptide|length=86bp
MSSPTPMLLLVLLAMMVQLIAADFEMASGPGTIRRQDRDPFKDGYFNLII
ACFALMFCFIACMFGVRLCLGKKRGNTSKSFFLVA*