prot_F-serratus_M_contig90.20393.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig90.20393.1
Unique Nameprot_F-serratus_M_contig90.20393.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length781
Homology
BLAST of mRNA_F-serratus_M_contig90.20393.1 vs. uniprot
Match: D7FKH1_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH1_ECTSI)

HSP 1 Score: 485 bits (1248), Expect = 1.970e-157
Identity = 510/831 (61.37%), Postives = 550/831 (66.19%), Query Frame = 0
Query:    1 MHDSHRRCEFAGCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRAGYTLLMLAQRERIAAQAALEETQKQQ----RARAPISGSSWPGGEDMAFPDYRSRWE--GTSPGSSASFSTNGAPTPGSG-GSF-PQPSPSGSFLSNQHRNNDGST----------------------LGDQGNYGPDSQTAKHNPNQWLWTAAPRGSSVGPRRPPPLKNPSDAGVLGIAGRP--PQAPDSLGDSPGNDWTKPTSAPT-QGIYPA-KRHCSPRRRSFSHSPEPGSRSMVGMPANMA----SSPASPNMGAIMGMSSATSGTPSPSGAMGIPTPPXXXXSAALPPPHGAPRRSAQRLPQPQFPTRALPRSSSGGPPRPPRSLSPGGL--TARSNSEGLYAVSSSGRSPVSNVGFXXSGPQSASSVGGFSGVFSPGNLSVASGGGPSSASPRWASPRRRAFGHSRTRSQGSVADTLEDLSIVDPGPPTLEPLRVFP-APGPLRSPRDRWRGGLPDRRN-SEIILPLPDRTQPEPGPGPVSDSRRRSFTASLFDQPGGRQIATDGKVDAMDTVEGGEGASAGITSGGSAGAIVGNXXEGADIGGG-----RWEPGLWTSTPGEGGDFQMMSAGYRQQAWPQQMQAG----SGGGDHGDAHVEEKETRRNSHMSVGTMPLTSTESLGDREG-SVFFSAE 779
            MHDSHRRCE +GCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DG AGYTLLMLAQRER+A                R RAP SGS WPG +DM + DYR RWE  G+S  S  +  + G P PG   G+F    S SGSFLS+Q     G                         G+ G+ G D + A HNP  W+WTA PRGSS G RRPPPLKNP++AGVLGIAGR   P    + GDSPG +WTKP+S  +   +YPA KRHCSPRRRSFSHSPEPGSR+M G+  +MA    SSPASPN   IM +  A+ GTPSP GAMGIPTPP    SAALPPPH A R +AQRLPQPQF  RA+PRSSSGGPPRPPRSLSPGG+  TARS    +YA+S +G                                                               GSVADTLEDLSIVDP PPTLEPLR  P    PLRSPRDRWR G  +RRN SEIILPLPDRTQP+P PGP SD RRRSFTASLF++     I  +G         G  G                 X  GA I  G     RW  G+W+S PGEG  FQ  SAG RQQ WP QMQ G     GGG  G  H E K TRR SH SVGTMPLTS+ESLGD +G SVFFSAE
Sbjct:    1 MHDSHRRCEHSGCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGGAGYTLLMLAQRERLAXXXXXXXXXXXXXXXARDRAPASGS-WPG-KDMPYSDYRPRWEAAGSSGSSGGTSFSGGQPAPGGRTGTFGSNSSSSGSFLSSQRSGGGGGDSGSFTGEXXXXXXXXXXXXXXXXGEPGSAGQDGKAAAHNPQPWVWTAQPRGSSQGARRPPPLKNPAEAGVLGIAGRQQSPLLDSTRGDSPGAEWTKPSSTQSAHAMYPAVKRHCSPRRRSFSHSPEPGSRTMAGLTGSMAGLQASSPASPN---IMSLG-ASGGTPSP-GAMGIPTPPGSSGSAALPPPHRARRSTAQRLPQPQFQNRAVPRSSSGGPPRPPRSLSPGGVASTARSPDGFVYALSGAG---------------------------------------------------------------GSVADTLEDLSIVDPIPPTLEPLRTLPPVAAPLRSPRDRWRAGFLERRNNSEIILPLPDRTQPDPAPGPASDVRRRSFTASLFERQDQMNIKDEGVAR-----PGERGGGXXXXXXXXXXXXXXXXANGAMIAAGAGEGDRWGAGMWSS-PGEG-VFQATSAGARQQGWPHQMQNGRTGDEGGGXXG--HAEAKATRRGSHHSVGTMPLTSSESLGDGDGGSVFFSAE 752          
BLAST of mRNA_F-serratus_M_contig90.20393.1 vs. uniprot
Match: A0A835ZFU8_9STRA (EsV-1-7 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFU8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.410e-6
Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 0
Query:    4 SHRRCEFAGCTKWPLYAFEGEKAKYCSQHKD 34
            S+RRCE  GCTKWPLYA+EGEKA++CS H++
Sbjct:   52 SYRRCEALGCTKWPLYAYEGEKARFCSAHRE 82          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig90.20393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKH1_ECTSI1.970e-15761.37EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH1... [more]
A0A835ZFU8_9STRA1.410e-670.97EsV-1-7 (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig90contigF-serratus_M_contig90:248165..254136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig90.20393.1mRNA_F-serratus_M_contig90.20393.1Fucus serratus malemRNAF-serratus_M_contig90 246354..254418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig90.20393.1 ID=prot_F-serratus_M_contig90.20393.1|Name=mRNA_F-serratus_M_contig90.20393.1|organism=Fucus serratus male|type=polypeptide|length=781bp
MHDSHRRCEFAGCTKWPLYAFEGEKAKYCSQHKDEGMVDVRSRRCQEPSC
TRQPSFGFEHQKPRFCAAHKDAGMVDVVSRRCEEAECRRRPLYGHEGEKG
RFCSYHKSEGMVDVVNKRCQHVGCKKRPVFGFEGEKGRFCSLHRSGGMVD
VVSRRCDSPGCKRQPSGTTDATQVQFCSLHRGDGRAGYTLLMLAQRERIA
AQAALEETQKQQRARAPISGSSWPGGEDMAFPDYRSRWEGTSPGSSASFS
TNGAPTPGSGGSFPQPSPSGSFLSNQHRNNDGSTLGDQGNYGPDSQTAKH
NPNQWLWTAAPRGSSVGPRRPPPLKNPSDAGVLGIAGRPPQAPDSLGDSP
GNDWTKPTSAPTQGIYPAKRHCSPRRRSFSHSPEPGSRSMVGMPANMASS
PASPNMGAIMGMSSATSGTPSPSGAMGIPTPPGSSGSAALPPPHGAPRRS
AQRLPQPQFPTRALPRSSSGGPPRPPRSLSPGGLTARSNSEGLYAVSSSG
RSPVSNVGFSPSGPQSASSVGGFSGVFSPGNLSVASGGGPSSASPRWASP
RRRAFGHSRTRSQGSVADTLEDLSIVDPGPPTLEPLRVFPAPGPLRSPRD
RWRGGLPDRRNSEIILPLPDRTQPEPGPGPVSDSRRRSFTASLFDQPGGR
QIATDGKVDAMDTVEGGEGASAGITSGGSAGAIVGNGGEGADIGGGRWEP
GLWTSTPGEGGDFQMMSAGYRQQAWPQQMQAGSGGGDHGDAHVEEKETRR
NSHMSVGTMPLTSTESLGDREGSVFFSAES*
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