prot_F-serratus_M_contig90.20386.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig90.20386.1
Unique Nameprot_F-serratus_M_contig90.20386.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length148
Homology
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Match: A0A6H5KUC8_9PHAE (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUC8_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 7.130e-72
Identity = 116/143 (81.12%), Postives = 126/143 (88.11%), Query Frame = 0
Query:    6 RLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLVEHNLARAQGYHCLFSHCKVPRKPSYSGVATFIRSESGLRTIASTNSLADAAFFGSPGSFA--RGLSPDRLTAIDSEGRVLVTDHGHFVLFNVYAPCIR 146
            R+LTWNINGLRKVAA +G +K LLDQF AD+VCFQEIKITRAGLVEH LARAQGYH  F HCK+PRK SYSGVATF+RSESGL+T+AST S  D+AFFGSPGSF   R LSPDRL A+DSEGRVLVTDHGHFVLFNVYAPCIR
Sbjct:   25 RILTWNINGLRKVAASHGGVKQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFHHCKLPRKVSYSGVATFVRSESGLKTVASTTSFGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGHFVLFNVYAPCIR 167          
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Match: D7FKG3_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG3_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 4.610e-71
Identity = 114/142 (80.28%), Postives = 127/142 (89.44%), Query Frame = 0
Query:    6 RLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLVEHNLARAQGYHCLFSHCKVPRKPSYSGVATFIRSESGLRTIASTNSLADAAFFGSPGSFA--RGLSPDRLTAIDSEGRVLVTDHGHFVLFNVYAPCI 145
            R+LTWNINGLRKVAA +G ++ LLDQF AD+VCFQEIKITRAGLVEH LARAQGYH  F+HCK+PRK SYSGVATF+RSESGL+T+AST SL D+AFFGSPGSF   R LSPDRL A+DSEGRVLVTDHGHFVLFNVYAPC+
Sbjct:   25 RILTWNINGLRKVAASHGGVQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFNHCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGHFVLFNVYAPCV 166          
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Match: A0A2P2J875_RHIMU (Uncharacterized protein MANES_01G146000 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2J875_RHIMU)

HSP 1 Score: 110 bits (275), Expect = 1.740e-26
Identity = 67/158 (42.41%), Postives = 89/158 (56.33%), Query Frame = 0
Query:    5 VRLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLVEHNLARAQGYHCLFSHCK--VPRKPSYSGVATFIRSESGLRTIASTNSLADAAFF--------------GSPGSFARGLSP---DRLTAIDSEGRVLVTDHGHFVLFNVYAP 143
            ++++T+N+NGLR+  + +GSL  LLD F+AD++CFQEIK+ R  L   +LA A GY   FS  +  V  +  YSGVATF R +S   +      +A    F              G     ARGL     D L  +DSEGR L+TDHGHFV+FNVY P
Sbjct:    1 MKIVTYNVNGLRQRISQFGSLLKLLDSFDADIICFQEIKLRRQELTA-DLAMADGYESFFSCTRTTVKGRTGYSGVATFCRVKSAFSSTELALPVAAEEGFTGLVNNNNNSKKEKGKVAEIARGLEEFERDELIKVDSEGRCLITDHGHFVIFNVYGP 157          
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Match: A0A067FYM9_CITSI (DNA-(apurinic or apyrimidinic site) endonuclease (Fragment) n=2 Tax=Citrus sinensis TaxID=2711 RepID=A0A067FYM9_CITSI)

HSP 1 Score: 109 bits (273), Expect = 2.560e-26
Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = 0
Query:    5 VRLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLVEHNLARAQGYHCLFSHCKVPRK--PSYSGVATFIRSESGLR-TIASTNSLADAAFFG----SPGSFARGL---SPDRLTAIDSEGRVLVTDHGHFVLFNVYAP 143
            ++++T+N+NGLR+  + +GSL+ LLD F+AD++CFQE K+ R  L + +L  A GY   FS  +   K    YSGVATF R +S    T  +    A+  F G    S      GL   S D L  IDSEGR ++TDHGHF+LFNVY P
Sbjct:    1 MKIVTYNVNGLRQRVSQFGSLRKLLDSFDADIICFQETKLRRQEL-KSDLVMADGYESFFSCTRTSDKGRTGYSGVATFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITDHGHFILFNVYGP 148          
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Match: A0A2P2J895_RHIMU (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2J895_RHIMU)

HSP 1 Score: 110 bits (275), Expect = 2.410e-25
Identity = 67/158 (42.41%), Postives = 89/158 (56.33%), Query Frame = 0
Query:    5 VRLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLVEHNLARAQGYHCLFSHCK--VPRKPSYSGVATFIRSESGLRTIASTNSLADAAFF--------------GSPGSFARGLSP---DRLTAIDSEGRVLVTDHGHFVLFNVYAP 143
            ++++T+N+NGLR+  + +GSL  LLD F+AD++CFQEIK+ R  L   +LA A GY   FS  +  V  +  YSGVATF R +S   +      +A    F              G     ARGL     D L  +DSEGR L+TDHGHFV+FNVY P
Sbjct:    1 MKIVTYNVNGLRQRISQFGSLLKLLDSFDADIICFQEIKLRRQELTA-DLAMADGYESFFSCTRTTVKGRTGYSGVATFCRVKSAFSSTELALPVAAEEGFTGLVNNNNNSKKEKGKVAEIARGLEEFERDELIKVDSEGRCLITDHGHFVIFNVYGP 157          
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Match: V4RVB8_CITCL (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Citrus clementina TaxID=85681 RepID=V4RVB8_CITCL)

HSP 1 Score: 109 bits (273), Expect = 2.640e-25
Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = 0
Query:    5 VRLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLVEHNLARAQGYHCLFSHCKVPRK--PSYSGVATFIRSESGLR-TIASTNSLADAAFFG----SPGSFARGL---SPDRLTAIDSEGRVLVTDHGHFVLFNVYAP 143
            ++++T+N+NGLR+  + +GSL+ LLD F+AD++CFQE K+ R  L + +L  A GY   FS  +   K    YSGVATF R +S    T  +    A+  F G    S      GL   S D L  IDSEGR ++TDHGHF+LFNVY P
Sbjct:    1 MKIVTYNVNGLRQRVSQFGSLRKLLDSFDADIICFQETKLRRQEL-KSDLVMADGYESFFSCTRTSDKGRTGYSGVATFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITDHGHFILFNVYGP 148          
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Match: UPI000C1D1EFC (DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1 n=3 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D1EFC)

HSP 1 Score: 110 bits (274), Expect = 3.230e-25
Identity = 66/160 (41.25%), Postives = 90/160 (56.25%), Query Frame = 0
Query:    5 VRLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLVEHNLARAQGYHCLFSHCKVPRK--PSYSGVATFIRSESGLRTIASTNSL-ADAAFFGSPGSFA--------------RGLSPDRLTAIDSEGRVLVTDHGHFVLFNVYAPCIRC 147
            ++++T+N+NGLR   + +GSL  LLD  +AD++CFQE K++R  L   +LARA+GY   FS  +   K    YSGVATF R +S   +      L A+  F G   +F+               G S D L  +D EGR ++TDHGHFVLFNVY P   C
Sbjct:    1 MKIVTYNVNGLRPRVSQFGSLLKLLDSLDADIICFQETKLSRQEL-RADLARAEGYESFFSCTRTSDKGRTGYSGVATFCRVKSAFSSKEVALPLSAEEGFTGLLENFSGYASRRDDSVVEGLEGFSVDELLKVDREGRCIITDHGHFVLFNVYGPRAEC 159          
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Match: V4SDT1_CITCL (DNA-(apurinic or apyrimidinic site) endonuclease n=13 Tax=Citrus TaxID=2706 RepID=V4SDT1_CITCL)

HSP 1 Score: 109 bits (273), Expect = 4.570e-25
Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = 0
Query:    5 VRLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLVEHNLARAQGYHCLFSHCKVPRK--PSYSGVATFIRSESGLR-TIASTNSLADAAFFG----SPGSFARGL---SPDRLTAIDSEGRVLVTDHGHFVLFNVYAP 143
            ++++T+N+NGLR+  + +GSL+ LLD F+AD++CFQE K+ R  L + +L  A GY   FS  +   K    YSGVATF R +S    T  +    A+  F G    S      GL   S D L  IDSEGR ++TDHGHF+LFNVY P
Sbjct:    1 MKIVTYNVNGLRQRVSQFGSLRKLLDSFDADIICFQETKLRRQEL-KSDLVMADGYESFFSCTRTSDKGRTGYSGVATFCRVKSPFSSTEVALPVAAEEGFTGLLETSGSKIMEGLEDFSKDELLKIDSEGRCVITDHGHFILFNVYGP 148          
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Match: A0A0K9RKC0_SPIOL (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RKC0_SPIOL)

HSP 1 Score: 108 bits (271), Expect = 7.780e-25
Identity = 67/160 (41.88%), Postives = 89/160 (55.62%), Query Frame = 0
Query:    4 VVRLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLVEHNLARAQGYHCLFSHCKVPRK--PSYSGVATFIRSES------------------GLRTIASTNSLADAAFFGSPGSFARGLSPDRLTAIDSEGRVLVTDHGHFVLFNVYAP 143
            +++++T+N+NG+R+  + YGSL  LLD  +AD++CFQEIK T+  L   +L  AQGY   FS  +   K    YSGVATF R +S                  GL   +S N  +   FF S     +    D L  IDSEGR ++TDHGHFVLFNVY P
Sbjct:    1 MLKIVTYNVNGIRQRISQYGSLLKLLDSLDADIICFQEIKSTKQELTA-DLIMAQGYESFFSCTRTTGKGRTGYSGVATFCRVKSAFSSTEVALPLAAEEGFTGLLDASSGNGFSSDKFF-SDMECLKEFRKDELLKIDSEGRCVITDHGHFVLFNVYGP 158          
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Match: A0A8K0E6J2_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0E6J2_9ROSA)

HSP 1 Score: 108 bits (271), Expect = 8.360e-25
Identity = 70/155 (45.16%), Postives = 88/155 (56.77%), Query Frame = 0
Query:    5 VRLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLVEHNLARAQGYHCLFSHCKVPRK--PSYSGVATFIRSESGLR-TIASTNSLADAAFFGSPGSF--ARGLSP-----------DRLTAIDSEGRVLVTDHGHFVLFNVYAP 143
            ++++T+N+NGLR   + YGSL  LLD F+AD++CFQE K+ R  L   +L  A GY   FS  +   K    YSGVATF R +S    T  S    A+  F G  G+   ARG +P           D L  ID EGR +VTDHGHFVLFNVY P
Sbjct:    1 MKIVTYNVNGLRPRISQYGSLLKLLDSFDADIICFQETKLRRQELTA-DLVMADGYESFFSCTRTCEKGRSGYSGVATFCRVKSAFSSTEVSLPLAAEQGFTGVLGNSQSARGGTPAIAPSLEEFARDELLKIDGEGRCVVTDHGHFVLFNVYGP 154          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig90.20386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUC8_9PHAE7.130e-7281.12DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
D7FKG3_ECTSI4.610e-7180.28DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A2P2J875_RHIMU1.740e-2642.41Uncharacterized protein MANES_01G146000 n=1 Tax=Rh... [more]
A0A067FYM9_CITSI2.560e-2644.30DNA-(apurinic or apyrimidinic site) endonuclease (... [more]
A0A2P2J895_RHIMU2.410e-2542.41DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
V4RVB8_CITCL2.640e-2544.30DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
UPI000C1D1EFC3.230e-2541.25DNA-(apurinic or apyrimidinic site) lyase 2 isofor... [more]
V4SDT1_CITCL4.570e-2544.30DNA-(apurinic or apyrimidinic site) endonuclease n... [more]
A0A0K9RKC0_SPIOL7.780e-2541.88DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
A0A8K0E6J2_9ROSA8.360e-2545.16Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 8..84
e-value: 1.2E-8
score: 34.8
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 2..146
e-value: 8.5E-31
score: 109.6
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 6..143
IPR004808AP endonuclease 1PANTHERPTHR22748AP ENDONUCLEASEcoord: 5..145
NoneNo IPR availablePANTHERPTHR22748:SF4DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2coord: 5..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig90contigF-serratus_M_contig90:164918..167573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig90.20386.1mRNA_F-serratus_M_contig90.20386.1Fucus serratus malemRNAF-serratus_M_contig90 164918..167578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig90.20386.1 ID=prot_F-serratus_M_contig90.20386.1|Name=mRNA_F-serratus_M_contig90.20386.1|organism=Fucus serratus male|type=polypeptide|length=148bp
MGSVVRLLTWNINGLRKVAAGYGSLKALLDQFEADVVCFQEIKITRAGLV
EHNLARAQGYHCLFSHCKVPRKPSYSGVATFIRSESGLRTIASTNSLADA
AFFGSPGSFARGLSPDRLTAIDSEGRVLVTDHGHFVLFNVYAPCIRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
IPR036691Endo/exonu/phosph_ase_sf
IPR004808AP_endonuc_1