prot_F-serratus_M_contig9.20372.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig9.20372.1
Unique Nameprot_F-serratus_M_contig9.20372.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length198
Homology
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI)

HSP 1 Score: 139 bits (351), Expect = 7.790e-35
Identity = 70/185 (37.84%), Postives = 109/185 (58.92%), Query Frame = 0
Query:    2 LLAMAAAKDGELRHFDAKRSFLKADIEEKICIKIPEEFQEFPGAVWRLNKAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVVHVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARELKFDQHLYVESMVKRFDVK--KAIKIPAASGVPTLS 184
            L++MAA KD ++ H D K ++L  D+ E+I ++ P  F E  G VWRL KA+YGL QAGRCWN K  + +  + F R+K+DPC+F +  +  A V+V + VDD+   + +     K  + L   F +KD+G     +  ++TR+R  R+L  DQ  Y+E ++KRF ++  K +  P  S V  L+
Sbjct:  319 LMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTES-AIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSMENCKPVSTPMESDVKGLA 502          
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 139 bits (351), Expect = 1.020e-34
Identity = 70/185 (37.84%), Postives = 109/185 (58.92%), Query Frame = 0
Query:    2 LLAMAAAKDGELRHFDAKRSFLKADIEEKICIKIPEEFQEFPGAVWRLNKAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVVHVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARELKFDQHLYVESMVKRFDVK--KAIKIPAASGVPTLS 184
            L++MAA KD ++ H D K ++L  D+ E+I ++ P  F E  G VWRL KA+YGL QAGRCWN K  + +  + F R+K+DPC+F +  +  A V+V + VDD+   + +     K  + L   F +KD+G     +  ++TR+R  R+L  DQ  Y+E ++KRF ++  K +  P  S V  L+
Sbjct:  924 LMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTES-AIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSMENCKPVSTPMESDVKGLA 1107          
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.840e-29
Identity = 61/180 (33.89%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 MLLAMAAAKDGELRHFDAKRSFLKADIEEKICIKIPEEFQEFPGAVWRLNKAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVVHVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARELKFDQHLYVESMVKRFDVKKAIKIPAASGV 180
            ML A+A   + +L HFD +++F+++++EE + +++P+      G + +L K++YGL QA R W+      + A+GFE+  AD CVF  + DG   +++VVHVDDIFA   ++   DKF A+L K   +K++G+  +Y  C   RN++   L   Q  + + +   + V     +P +SGV
Sbjct:   47 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV 225          
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Match: A0A6H5L663_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L663_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 3.350e-29
Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = 0
Query:   47 WRLNKAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVVHVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARELKFDQHLYVESMVKRFDVKKAIKIPAASGVPTLSKAD 187
            W   +AIYGL Q+GR W     D +   GFE  KADPCVF K+VDG   ++VV++VDDI     D+   ++ +A L KKF  K++G+  ++  C I R+ +A  L+     Y++SMVKRFDV+ A +IPA+ GV    K D
Sbjct:   15 WDAERAIYGLKQSGRQWGYHAADTLVENGFEPCKADPCVFRKMVDGVVVMIVVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECEWFDGCAIERDFEAGTLRISHAAYIDSMVKRFDVQSASRIPASPGVDLGPKRD 154          
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Match: A0A6H5KJF9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF9_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 5.920e-29
Identity = 59/180 (32.78%), Postives = 104/180 (57.78%), Query Frame = 0
Query:    1 MLLAMAAAKDGELRHFDAKRSFLKADIEEKICIKIPEEFQEFPGAVWRLNKAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVVHVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARELKFDQHLYVESMVKRFDVKKAIKIPAASGV 180
            ML A+A   + +L HFD +++F+++++EE + +++P+      G + +L K++YGL QA R W+      + A+GFE+  AD CVF  +  G   +++VVHVDDIFA   ++   DKF A+L K   +K++G+  +Y  C   R+++   L   Q  + + +   + V     +P +SGV
Sbjct:    1 MLAALACELNLDLCHFDIEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFA-VGEREKCDKFGADLNKSVPVKNLGELRWYSGCFYERSKETGRLTISQQTFTDELAAEYGVAGGKSVPMSSGV 179          
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Match: A0A6H5JSQ4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSQ4_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 7.430e-29
Identity = 61/180 (33.89%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 MLLAMAAAKDGELRHFDAKRSFLKADIEEKICIKIPEEFQEFPGAVWRLNKAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVVHVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARELKFDQHLYVESMVKRFDVKKAIKIPAASGV 180
            ML A+A   + +L HFD +++F+++++EE + +++P+      G + +L K++YGL QA R W+      + A+GFE+  AD CVF  + DG   +++VVHVDDIFA   ++   DKF A+L K   +K++G+  +Y  C   RN++   L   Q  + + +   + V     +P +SGV
Sbjct:  538 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV 716          
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Match: A0A6H5J9U0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9U0_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 7.690e-29
Identity = 61/180 (33.89%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 MLLAMAAAKDGELRHFDAKRSFLKADIEEKICIKIPEEFQEFPGAVWRLNKAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVVHVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARELKFDQHLYVESMVKRFDVKKAIKIPAASGV 180
            ML A+A   + +L HFD +++F+++++EE + +++P+      G + +L K++YGL QA R W+      + A+GFE+  AD CVF  + DG   +++VVHVDDIFA   ++   DKF A+L K   +K++G+  +Y  C   RN++   L   Q  + + +   + V     +P +SGV
Sbjct:  517 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGKSVPMSSGV 695          
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 8.310e-29
Identity = 61/180 (33.89%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 MLLAMAAAKDGELRHFDAKRSFLKADIEEKICIKIPEEFQEFPGAVWRLNKAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVVHVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARELKFDQHLYVESMVKRFDVKKAIKIPAASGV 180
            ML A+A   + +L HFD +++F+++++EE + +++P+      G + +L K++YGL QA R W+      + A+GFE+  AD CVF  + DG   +++VVHVDDIFA   ++   DKF A+L K   +K++G+  +Y  C   RN++   L   Q  + + +   + V     +P +SGV
Sbjct: 1383 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV 1561          
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 8.310e-29
Identity = 61/180 (33.89%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 MLLAMAAAKDGELRHFDAKRSFLKADIEEKICIKIPEEFQEFPGAVWRLNKAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVVHVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARELKFDQHLYVESMVKRFDVKKAIKIPAASGV 180
            ML A+A   + +L HFD +++F+++++EE + +++P+      G + +L K++YGL QA R W+      + A+GFE+  AD CVF  + DG   +++VVHVDDIFA   ++   DKF A+L K   +K++G+  +Y  C   RN++   L   Q  + + +   + V     +P +SGV
Sbjct: 1169 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV 1347          
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 8.530e-29
Identity = 61/180 (33.89%), Postives = 105/180 (58.33%), Query Frame = 0
Query:    1 MLLAMAAAKDGELRHFDAKRSFLKADIEEKICIKIPEEFQEFPGAVWRLNKAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVVHVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARELKFDQHLYVESMVKRFDVKKAIKIPAASGV 180
            ML A+A   + +L HFD +++F+++++EE + +++P+      G + +L K++YGL QA R W+      + A+GFE+  AD CVF  + DG   +++VVHVDDIFA   ++   DKF A+L K   +K++G+  +Y  C   RN++   L   Q  + + +   + V     +P +SGV
Sbjct: 1237 MLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV 1415          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5GI29_9HEMI7.790e-3537.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GGZ1_9HEMI1.020e-3437.84Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JFG2_9PHAE1.840e-2933.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L663_9PHAE3.350e-2943.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJF9_9PHAE5.920e-2932.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JSQ4_9PHAE7.430e-2933.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5J9U0_9PHAE7.690e-2933.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J4N2_9PHAE8.310e-2933.89Integrase catalytic domain-containing protein n=18... [more]
A0A6H5L867_9PHAE8.310e-2933.89Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBD4_9PHAE8.530e-2933.89Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..171
e-value: 1.8E-33
score: 116.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 46..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig9contigF-serratus_M_contig9:1149135..1149728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig9.20372.1mRNA_F-serratus_M_contig9.20372.1Fucus serratus malemRNAF-serratus_M_contig9 1148955..1150120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig9.20372.1 ID=prot_F-serratus_M_contig9.20372.1|Name=mRNA_F-serratus_M_contig9.20372.1|organism=Fucus serratus male|type=polypeptide|length=198bp
MLLAMAAAKDGELRHFDAKRSFLKADIEEKICIKIPEEFQEFPGAVWRLN
KAIYGLVQAGRCWNNKFCDDMTAIGFERAKADPCVFHKVVDGEAEVVVVV
HVDDIFAHAKDQATMDKFVAELGKKFRLKDMGDAGYYMSCHITRNRKARE
LKFDQHLYVESMVKRFDVKKAIKIPAASGVPTLSKADGPRNPMRRRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2