prot_F-serratus_M_contig9.20357.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig9.20357.1
Unique Nameprot_F-serratus_M_contig9.20357.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length212
Homology
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: D8LAZ6_ECTSI (RNA exonuclease 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAZ6_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 9.810e-97
Identity = 146/206 (70.87%), Postives = 170/206 (82.52%), Query Frame = 0
Query:    3 GRRGVPARASAERDIPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFSGKKRGRRAVVDQQ 208
            G +G   R  +E+ + AAEKAQYV LDCEMVGVGP G RSALARCCLVDWDGD IYDK+V P ERVTD+RTFVSGV+A  LK G+R R+CQ+EVA ILK+K LVGHAL NDLKAL M+HPP  TRDTATYRP++K+HG AGGKL+P SLK L+ EHL R IQ GQH+PAEDA+ AM+LYKLAR EWEKSL+ +GK RGR++ VDQQ
Sbjct:  251 GVKGRGKRGGSEQALTAAEKAQYVALDCEMVGVGPGGCRSALARCCLVDWDGDTIYDKHVTPNERVTDFRTFVSGVKANHLKGGVRLRQCQEEVAAILKDKVLVGHALTNDLKALMMSHPPRSTRDTATYRPYQKAHGKAGGKLRPRSLKLLSQEHLDRPIQTGQHNPAEDAKAAMDLYKLARFEWEKSLSAAGKMRGRKSFVDQQ 456          
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: W7U6T2_9STRA (RNA exonuclease 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6T2_9STRA)

HSP 1 Score: 211 bits (537), Expect = 7.300e-65
Identity = 105/177 (59.32%), Postives = 130/177 (73.45%), Query Frame = 0
Query:   16 DIPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSL 192
            D+   EK+ YVGLDCEMVGVG  G RSALAR  LVD+DG VIYD++V P ER+TD+RT+VSGV+AK LK  +  +EC  +VA+++K K +VGHAL NDL+ L + HP  M RDTA YR + +SHG  GGKL+P  LK LAL+ LG  IQEG+H  A+DAR AM LY+  R EWEK L
Sbjct:   93 DMTVMEKSLYVGLDCEMVGVGDGGKRSALARVTLVDFDGRVIYDEHVRPRERITDFRTWVSGVKAKHLKAALSLKECILQVADLVKGKIIVGHALKNDLQVLMLQHPVAMIRDTARYRAYMRSHGKEGGKLRPRRLKDLALDFLGMEIQEGKHDSADDARAAMLLYRAQRTEWEKEL 269          
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A836CG98_9STRA (RNA exonuclease 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG98_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.030e-63
Identity = 112/190 (58.95%), Postives = 130/190 (68.42%), Query Frame = 0
Query:   24 QYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRG--IRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFS--GKKRGRRAVVDQQA 209
            QYV LDCEMVG G SG  SALA+CC+ DW G+ +Y  YV P ERVTD+RTFVSG+RA  LK    +   ECQK VA I K + +VGHAL NDLKAL ++HP +M RDTATYRP+K+ +    GKL P SLK LALE LGR IQ G+H PAEDA  AM+L+KL   EWE SL     GKK G    V Q A
Sbjct:   46 QYVALDCEMVGTGVSGRHSALAQCCITDWHGNTLYCSYVRPPERVTDFRTFVSGIRATHLKGADAVTLLECQKAVAAITKGRIIVGHALHNDLKALMLSHPKNMIRDTATYRPYKRPN--RAGKLAPRSLKHLALEFLGREIQGGEHSPAEDAIAAMDLFKLKWAEWETSLKQGRVGKKAGASKPVRQIA 233          
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A1V9YXD8_9STRA (RNA exonuclease 4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YXD8_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.090e-60
Identity = 100/182 (54.95%), Postives = 133/182 (73.08%), Query Frame = 0
Query:   14 ERDIPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFS 195
            ++++   + +  V +DCEMVGVG  G+RS LARC +VD+DG+V+YDK+V P ERVTD+RT VSG+R+K L+  I F +CQ+EVAEI ++K LVGHAL ND++AL +THP  M RDT  YRP+ +   + G KL P SLK LALE L +TIQ G+H   EDART++ELYK A   WEK++  S
Sbjct:   54 KKNVEWIDTSTIVAMDCEMVGVGSDGARSVLARCSIVDFDGNVVYDKHVKPMERVTDFRTHVSGIRSKHLRDAIPFTQCQQEVAEIFEDKILVGHALRNDMQALMLTHPKGMIRDTTKYRPYMRRK-VNGTKLFPKSLKNLALEVLKKTIQTGEHDSVEDARTSLELYKHAMAPWEKAIKAS 234          
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A7S1YYA6_TRICV (RNA exonuclease 4 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YYA6_TRICV)

HSP 1 Score: 194 bits (494), Expect = 4.350e-59
Identity = 97/179 (54.19%), Postives = 131/179 (73.18%), Query Frame = 0
Query:   17 IPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQ-EGQHHPA-EDARTAMELYKLARREWEKSLA 193
            +P  E+++YV +DCEMVG+G +G  SALAR  LVDWDG V+ D +V   +RVTD+RT+VSGVR+KD++  +   +C+++VAEILK K LVGH+L NDL AL + HP    RDTA+YRP+ K  G  GGK++P  L+ LA E+LG +IQ EG+ H + +DAR AMELYK AR  WE+ +A
Sbjct:   61 VPEPERSRYVAVDCEMVGIGSAGRTSALARTSLVDWDGKVLLDTFVRVPDRVTDFRTWVSGVRSKDIRNAMEPEDCREKVAEILKGKVLVGHSLKNDLSALLLDHPRGDRRDTASYRPYMKPSGRGGGKMRPRRLRDLAEEYLGISIQGEGEEHSSIDDARAAMELYKFARTRWEREVA 239          
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A6G0X6W8_9STRA (RNA exonuclease 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6W8_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.410e-57
Identity = 96/172 (55.81%), Postives = 127/172 (73.84%), Query Frame = 0
Query:   21 EKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSL 192
            + ++ V +DCEMVGVG SG+RS LARC +VD+DG+V+YD++V P E+VTD+RT VSG+R+K L+  I F +CQ++V  ILK+K LVGHAL NDL+AL +THP  M RDT  YRP+ +   + G KL P +L+ LA E L +TIQ G+H   EDART +ELYK A   WEK+L
Sbjct:   72 DTSKIVAMDCEMVGVGLSGTRSVLARCSIVDFDGNVVYDEHVKPMEKVTDFRTHVSGIRSKSLRNAIPFPKCQQDVGAILKDKILVGHALRNDLQALMLTHPKPMIRDTTKYRPYMRRK-VNGTKLLPKALRHLAQEVLDKTIQTGEHDSVEDARTTLELYKKAMVPWEKAL 242          
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A024UI79_9STRA (RNA exonuclease 4 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI79_9STRA)

HSP 1 Score: 192 bits (487), Expect = 5.710e-57
Identity = 96/170 (56.47%), Postives = 126/170 (74.12%), Query Frame = 0
Query:   26 VGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFS 195
            V +DCEMVGVG  G+RS LARC +VD+DG+V+YD++V P E+VTD+RT VSG+R+K L++ I F +CQ +VA ILK+K LVGHA+ NDL+AL +THP  M RDT  YRP+ +   + G KL P +L+ LALE LGRTIQ G+H    DA+T ++LYK A   WEK+L  S
Sbjct:   89 VAMDCEMVGVGVGGTRSVLARCSIVDFDGNVVYDEHVKPLEKVTDFRTHVSGIRSKSLRKAIPFAKCQVDVAAILKDKILVGHAVRNDLQALMLTHPKPMLRDTTKYRPYMRRR-VNGTKLLPKALRHLALEVLGRTIQGGEHDSVIDAQTTLDLYKHAMVPWEKALKAS 257          
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: W4GFX5_9STRA (RNA exonuclease 4 n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFX5_9STRA)

HSP 1 Score: 190 bits (482), Expect = 5.820e-56
Identity = 95/170 (55.88%), Postives = 122/170 (71.76%), Query Frame = 0
Query:   26 VGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFS 195
            V +DCEMVGVG  G+RS LARC +VD++GDV+YD++V P E+VTDYRT VSG+R+K  +  I F +CQ +V  ILK+K LVGHA+ NDL+AL +THP  M RDT  YRP+ +   + G KL P +L+ LALE L +TIQ G+H    DART +ELYK A   WEK+L  S
Sbjct:  107 VAMDCEMVGVGVGGTRSVLARCSIVDFNGDVVYDEHVKPLEKVTDYRTHVSGIRSKSFRNAISFAQCQVDVGAILKDKILVGHAVRNDLQALMLTHPKPMLRDTTKYRPYMRRR-VNGTKLLPKALRHLALEVLDKTIQAGEHDSVIDARTTLELYKKAMVPWEKALKAS 275          
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A485LPN0_9STRA (RNA exonuclease 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPN0_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.820e-55
Identity = 95/175 (54.29%), Postives = 124/175 (70.86%), Query Frame = 0
Query:   21 EKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFS 195
            + A  V +DCEMVGVG  G+RS LARC +V +DG V+YD++V P E+VTD+RT VSG+R+K L+  I F +CQ +V E+LK+K LVGHA+ NDL+AL +THP  M RDT  YRP+ +   + G KL P +L+ LA E L +TIQ G+H   EDART +ELYK A   WEK+L  S
Sbjct:   89 DTALIVAMDCEMVGVGVGGTRSVLARCSIVGFDGTVLYDEHVKPLEKVTDFRTHVSGIRSKSLRNAIPFAKCQNDVGELLKDKILVGHAVRNDLQALMLTHPKPMLRDTTKYRPYMRRR-MNGTKLLPKALRHLAQEVLDKTIQTGEHDSVEDARTTLELYKRAMVPWEKALKAS 262          
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Match: A0A7S2HLT8_9STRA (RNA exonuclease 4 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HLT8_9STRA)

HSP 1 Score: 187 bits (476), Expect = 6.480e-55
Identity = 101/188 (53.72%), Postives = 124/188 (65.96%), Query Frame = 0
Query:   13 AERDIPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLVDWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEILKNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTSLKKLALEHLGRTIQEG--QHHPAEDARTAMELYKLARREWEKSLAFSGKK 198
            A   I   EKA++V LDCEMVGVGP G +SALAR  +V+WDGDVI+D +V   E VTDYRTFVSGVR  D++ G+ F EC++ V +IL+++ +VGHAL ND  AL MTHP H  RDTA Y  F K        L P  LK LA + LG  IQE   +H   EDA  AMELYK ARR+WE ++ +  KK
Sbjct:  147 AVEKITEEEKARFVALDCEMVGVGPHGEQSALARVSIVNWDGDVIFDTFVKVDEPVTDYRTFVSGVREADIEYGMDFDECRERVKDILEDRIIVGHALKNDFHALDMTHPWHQIRDTARYEHFMKKSKTCPEMLLPKKLKVLAKDKLGMLIQEEGKEHCSVEDATAAMELYKKARRKWELAVEWKMKK 334          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20357.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAZ6_ECTSI9.810e-9770.87RNA exonuclease 4 n=1 Tax=Ectocarpus siliculosus T... [more]
W7U6T2_9STRA7.300e-6559.32RNA exonuclease 4 n=2 Tax=Monodopsidaceae TaxID=42... [more]
A0A836CG98_9STRA2.030e-6358.95RNA exonuclease 4 n=1 Tax=Tribonema minus TaxID=30... [more]
A0A1V9YXD8_9STRA1.090e-6054.95RNA exonuclease 4 n=1 Tax=Thraustotheca clavata Ta... [more]
A0A7S1YYA6_TRICV4.350e-5954.19RNA exonuclease 4 (Fragment) n=1 Tax=Trieres chine... [more]
A0A6G0X6W8_9STRA1.410e-5755.81RNA exonuclease 4 n=1 Tax=Aphanomyces euteiches Ta... [more]
A0A024UI79_9STRA5.710e-5756.47RNA exonuclease 4 n=2 Tax=Aphanomyces invadans Tax... [more]
W4GFX5_9STRA5.820e-5655.88RNA exonuclease 4 n=8 Tax=Aphanomyces astaci TaxID... [more]
A0A485LPN0_9STRA1.820e-5554.29RNA exonuclease 4 n=1 Tax=Aphanomyces stellatus Ta... [more]
A0A7S2HLT8_9STRA6.480e-5553.72RNA exonuclease 4 n=1 Tax=Helicotheca tamesis TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 24..190
e-value: 4.6E-36
score: 135.8
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 26..181
e-value: 1.7E-9
score: 38.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 20..203
e-value: 1.0E-51
score: 177.0
IPR034920RNA exonuclease 4PANTHERPTHR12801:SF45RNA EXONUCLEASE 4coord: 22..193
NoneNo IPR availablePANTHERPTHR12801EXONUCLEASEcoord: 22..193
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 25..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig9contigF-serratus_M_contig9:631990..635538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig9.20357.1mRNA_F-serratus_M_contig9.20357.1Fucus serratus malemRNAF-serratus_M_contig9 631990..635538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig9.20357.1 ID=prot_F-serratus_M_contig9.20357.1|Name=mRNA_F-serratus_M_contig9.20357.1|organism=Fucus serratus male|type=polypeptide|length=212bp
VDGRRGVPARASAERDIPAAEKAQYVGLDCEMVGVGPSGSRSALARCCLV
DWDGDVIYDKYVIPGERVTDYRTFVSGVRAKDLKRGIRFRECQKEVAEIL
KNKYLVGHALLNDLKALAMTHPPHMTRDTATYRPFKKSHGIAGGKLQPTS
LKKLALEHLGRTIQEGQHHPAEDARTAMELYKLARREWEKSLAFSGKKRG
RRAVVDQQARD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR034920Rex4
IPR012337RNaseH-like_sf