prot_F-serratus_M_contig9.20356.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig9.20356.1
Unique Nameprot_F-serratus_M_contig9.20356.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length247
Homology
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Match: D8LAZ7_ECTSI (Transcription initiation factor TFIID subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ7_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 9.870e-58
Identity = 111/191 (58.12%), Postives = 140/191 (73.30%), Query Frame = 0
Query:   57 IQLLKDAHVLSYEPRVLTHLVHRMRAYTAEILADARDYADHAGRVKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGLRLPPPEFQTTLPDLQWEVLKELVPTGASQVRLDLDLRRGGASRSHGGSRNKKSKSSETFKANKPFTLKEKEEQQKANLAKAEAKMKKRQ-QGLNVKR 246
            +QLLKDA V SYEPRV++HLV RMR YT E+L DARDYADHAGR  + + DVRLA RKKQ+AL+AGP +RED I  A+EVNRIPLP IPD+FG+RLPP ++Q TLP+LQWE   E  P       +D+D  +  +  S  G+RNKK+K++   +  KP TLKEK+EQ++AN AKAEAK  +R+ Q  N KR
Sbjct:    1 MQLLKDAGVTSYEPRVVSHLVDRMRRYTREVLIDARDYADHAGRTDLGMQDVRLAVRKKQDALSAGPPSREDQIRQADEVNRIPLPVIPDKFGVRLPPFQYQNTLPNLQWEAHAE-PPVHDEAGEMDVDPEQAPSPLS--GNRNKKAKTTPGLETKKPLTLKEKKEQEEANRAKAEAKAARRRLQAQNAKR 188          
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Match: A0A485L1Y3_9STRA (Aste57867_14710 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1Y3_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.660e-18
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0
Query:   59 LLKDAHVLSYEPRVLTHLVHRMRAYTAEILADARDYADHAGRVKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGLRLPPPEFQTT 160
            +L    V  YEPRV+T L+  +  YT+E+L DA++Y+ +A +  I  DD+RLAA  +     A   +RE ++ LAE+ N IPLPPIP E+G+RLPP E Q T
Sbjct:   56 ILDSMGVDKYEPRVITQLLEFIHRYTSEVLVDAQEYSSYANKSSIDADDIRLAAMSRLNHNYAQMPSRELMMELAEKRNTIPLPPIPSEYGVRLPPVEHQLT 157          
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Match: F4P4F0_BATDJ (Uncharacterized protein (Fragment) n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4P4F0_BATDJ)

HSP 1 Score: 86.7 bits (213), Expect = 5.520e-18
Identity = 46/115 (40.00%), Postives = 69/115 (60.00%), Query Frame = 0
Query:   51 RDHQSMIQLLKDAHVLSYEPRVLTHLVHRMRAYTAEILADARDYADHAGRVKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGLRLPPPEFQTTLPDLQ 165
            RD + +  +L+ A V  YEPR++  L+     Y  ++L D++ +ADHAG   + +DD+RLA   +      GP +RE ++ LAE+ N IPLP IP++FGLRLPP     T  + Q
Sbjct:    2 RDAKLISLILQAAEVDDYEPRIIPQLLEFAHRYVQDVLQDSQVFADHAGHKDLEVDDIRLAIESRVAHSFTGPPSRETMMELAEKKNCIPLPLIPEKFGLRLPPERNTLTKANFQ 116          
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Match: T0Q747_SAPDV (Transcription initiation factor TFIID subunit 9B n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q747_SAPDV)

HSP 1 Score: 88.6 bits (218), Expect = 7.890e-18
Identity = 46/100 (46.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   59 LLKDAHVLSYEPRVLTHLVHRMRAYTAEILADARDYADHAGRVKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGLRLPPPEFQ 158
            +L+   V  YEPRV+T L+  +  YT E+L DA++++ +A + +I  DDVRLAA  +     A    RE ++ LAE+ N IPLP IP+E+G+RLPPPE Q
Sbjct:   43 ILESMGVDKYEPRVVTQLLEFVHRYTTEVLVDAQEFSQYANKAEIDADDVRLAAMARLNHTYAQMPARELMMELAEKRNAIPLPLIPNEYGVRLPPPELQ 142          
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Match: A0A1S8VMC7_9FUNG (Uncharacterized protein n=3 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VMC7_9FUNG)

HSP 1 Score: 87.4 bits (215), Expect = 3.280e-17
Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = 0
Query:   51 RDHQSMIQLLKDAHVLSYEPRVLTHLVHRMRAYTAEILADARDYADHAGRVKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGLRLPPPEFQTTLPDLQ 165
            RD + +  +L+ A V  YEPR++  L+     Y  ++L D++ +ADHAG  ++ +DDVRLA   +      GP +RE ++ LAE+ N IPLP IP++FGLRLPP     T  + Q
Sbjct:   16 RDAKLVSLILQAADVDDYEPRLIPQLLEFAHRYVQDVLQDSQVFADHAGHKELEVDDVRLAIESRVAHSFTGPPSRETMMELAEKKNSIPLPLIPEKFGLRLPPERNTLTKANFQ 130          
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Match: A0A1V9ZX43_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX43_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 4.090e-17
Identity = 42/100 (42.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:   59 LLKDAHVLSYEPRVLTHLVHRMRAYTAEILADARDYADHAGRVKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGLRLPPPEFQ 158
            +L+   V+ YEPRV++ L+  +  YT  +L DA++Y+ +A + ++  DD+RLAA  +     +    RE ++ LAE+ N IPLPPIP+E+G+RLP PE+Q
Sbjct:   45 ILESMGVVKYEPRVISQLLEFVHRYTTNVLVDAQEYSHYASKPEMDQDDIRLAAMSRLHHTYSQMPPRELMMELAEKRNAIPLPPIPNEYGVRLPSPEYQ 144          
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Match: UPI000644E8C7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E8C7)

HSP 1 Score: 89.0 bits (219), Expect = 5.540e-17
Identity = 47/122 (38.52%), Postives = 74/122 (60.66%), Query Frame = 0
Query:   49 EERDHQSMIQLLKDAHVLSYEPRVLTHLVHRMRAYTAEILADARDYADHAGRVKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGLRLPPPEFQTTLPDLQWEVLK 170
            E RD + +  +LK   V S++PRV+  L+  M  Y  E+L D+  Y++H+GR +I + D+RL+ + +       P  RE ++ ++EE NRIPLPPIP +FG+ LPP E+    P+ Q +  K
Sbjct:  170 EPRDSRVIKNILKTMGVQSHDPRVVNQLLEFMFKYVYEVLQDSIAYSEHSGRSEIDISDIRLSIQSRVNFSFTQPPPRELLLSISEEKNRIPLPPIPQKFGVLLPPDEYCLNYPNYQVDPAK 291          
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Match: A0A177WG97_BATDL (Uncharacterized protein n=1 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177WG97_BATDL)

HSP 1 Score: 86.7 bits (213), Expect = 6.740e-17
Identity = 46/115 (40.00%), Postives = 69/115 (60.00%), Query Frame = 0
Query:   51 RDHQSMIQLLKDAHVLSYEPRVLTHLVHRMRAYTAEILADARDYADHAGRVKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGLRLPPPEFQTTLPDLQ 165
            RD + +  +L+ A V  YEPR++  L+     Y  ++L D++ +ADHAG   + +DD+RLA   +      GP +RE ++ LAE+ N IPLP IP++FGLRLPP     T  + Q
Sbjct:   16 RDAKLISLILQAAEVDDYEPRIIPQLLEFAHRYVQDVLQDSQVFADHAGHKDLEVDDIRLAIESRVAHSFTGPPSRETMMELAEKKNCIPLPLIPEKFGLRLPPERNTLTKANFQ 130          
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Match: A0A151Z337_9MYCE (Transcription initiation factor TFIID subunit n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z337_9MYCE)

HSP 1 Score: 88.2 bits (217), Expect = 7.070e-17
Identity = 50/125 (40.00%), Postives = 77/125 (61.60%), Query Frame = 0
Query:   49 EERDHQSMIQLLKDAHVLSYEPRVLTHLVHRMRAYTAEILADARDYADHAGRVKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGLRLPPPEFQTTLPDLQWEVLKELV 173
            E RD + +  +L    V SY+PRV+  L+  M  Y  +IL D++ YA+H+G+ ++ + DVRL+ + +    +  P  RE V+ +AEE N+IPLP IP++FG+ LPP E+  T P+ Q    K LV
Sbjct:   61 EPRDARIIKSILNTMGVQSYDPRVVNQLLEFMTKYVFDILQDSQVYAEHSGKTEMDVSDVRLSIQSRVNHTSTPP-PREMVVGIAEEQNKIPLPAIPNKFGVFLPPDEYCITNPNYQIVPNKPLV 184          
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Match: W4FUK8_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUK8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 8.700e-17
Identity = 50/120 (41.67%), Postives = 73/120 (60.83%), Query Frame = 0
Query:   68 YEPRVLTHLVHRMRAYTAEILADARDYADHAGRVKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGLRLPPPEFQTTLPDLQW---EVLKELVPTGASQVRLDL 184
            YEPRV+  L+  +  YT+EIL DA++Y+  A +  I  DD+RLAA  + +   A   +RE ++ LAE+ N +PLPPIP E+G+RLPP E Q T  +++        +L P  A+ V L L
Sbjct:   69 YEPRVIPQLLEFVHRYTSEILVDAQEYSTFANKPAIDADDIRLAAASRLKHTYAQIPSRELMMELAEKRNALPLPPIPSEYGVRLPPVEHQLTAENIRLYPNHHPSQLQPPTATTVPLPL 188          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig9.20356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAZ7_ECTSI9.870e-5858.12Transcription initiation factor TFIID subunit n=2 ... [more]
A0A485L1Y3_9STRA3.660e-1846.08Aste57867_14710 protein n=1 Tax=Aphanomyces stella... [more]
F4P4F0_BATDJ5.520e-1840.00Uncharacterized protein (Fragment) n=1 Tax=Batrach... [more]
T0Q747_SAPDV7.890e-1846.00Transcription initiation factor TFIID subunit 9B n... [more]
A0A1S8VMC7_9FUNG3.280e-1740.87Uncharacterized protein n=3 Tax=Batrachochytrium s... [more]
A0A1V9ZX43_9STRA4.090e-1742.00Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
UPI000644E8C75.540e-1738.52hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A177WG97_BATDL6.740e-1740.00Uncharacterized protein n=1 Tax=Batrachochytrium d... [more]
A0A151Z337_9MYCE7.070e-1740.00Transcription initiation factor TFIID subunit n=1 ... [more]
W4FUK8_9STRA8.700e-1741.67Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 218..238
NoneNo IPR availablePANTHERPTHR12595POS9-ACTIVATING FACTOR FAP7-RELATEDcoord: 49..222
NoneNo IPR availablePANTHERPTHR12595:SF6TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTORcoord: 49..222
IPR009072Histone-foldGENE3D1.10.20.10coord: 51..115
e-value: 1.2E-16
score: 62.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 51..113
IPR003162Transcription initiation factor TAFII31PFAMPF02291TFIID-31kDacoord: 51..163
e-value: 3.8E-26
score: 91.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig9contigF-serratus_M_contig9:626744..630479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig9.20356.1mRNA_F-serratus_M_contig9.20356.1Fucus serratus malemRNAF-serratus_M_contig9 626744..630479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig9.20356.1 ID=prot_F-serratus_M_contig9.20356.1|Name=mRNA_F-serratus_M_contig9.20356.1|organism=Fucus serratus male|type=polypeptide|length=247bp
HEGVTRYARSPSHLELGLSTKLDPMPSNSTSKLPPNPRAVENRMKAALEE
RDHQSMIQLLKDAHVLSYEPRVLTHLVHRMRAYTAEILADARDYADHAGR
VKISLDDVRLAARKKQEALAAGPLTREDVIWLAEEVNRIPLPPIPDEFGL
RLPPPEFQTTLPDLQWEVLKELVPTGASQVRLDLDLRRGGASRSHGGSRN
KKSKSSETFKANKPFTLKEKEEQQKANLAKAEAKMKKRQQGLNVKR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003162TFIID-31