prot_F-serratus_M_contig895.20314.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig895.20314.1
Unique Nameprot_F-serratus_M_contig895.20314.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length785
Homology
BLAST of mRNA_F-serratus_M_contig895.20314.1 vs. uniprot
Match: D7G3D9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D9_ECTSI)

HSP 1 Score: 495 bits (1274), Expect = 1.120e-166
Identity = 239/378 (63.23%), Postives = 302/378 (79.89%), Query Frame = 0
Query:   37 MQTEVRVADYKTVFGGRIQSCFTGKDAVEWCMRKEFCSNEMDAVHLLNRMLRRGLMHHCNLNKLMENNATAFYRFPQEHFKMLVDQTGAGRSLRRRLRPRAKTLQGAAALQERWYADVPTLPAEKVHNLGQVLEMLNCRDIQRGLRRHLDVFPGNELVQLLIESGVAKDETDALAVGNGFLRAGLFYHIRLKAPLRNDDTLYRLATHQYDLLVNRDQVMGMSYNGRPGGI----SADDGKGGSVGVGVHEVKVDGGLDMQGKTALELATSSRYWTSFRASKLYELTLNVVEAFIDMSDDWDSHVDQMYPTYCECYLTRDKEATMQSTHSSTRTLHPVWNCPVAFVDVDYLDMVHIDLKAHTQLGHDITVGSLEFTAHE 410
            M  EV V ++KT+ GG I++CF+GK AV+WC++K+ CS+E+DA+HLLNRML RGL+HHC L+KL+E + TA+YRFPQ+HFK+LVDQTGA +S+RRRLRP +KTL G AAL+ERWYADVPTLP++KV   G+VL+ L  RD+ RGLRR+  VF G E V+LLI++G AKD TDALA+GN FLRAGLF+ + L+APLRND+TLYRLA +Q+ +LV+RDQV G SY+G         + DD + G+V   +    +   L+ +G++ALELAT+SRYWTS+RASKLY + L V+E FIDMS+DWD HVD+M+PTYCECYLTRDKEAT  ST  S +TLHPVWNCPVAFVDVDYLD+V IDLKA T LG D T+GS+EF AHE
Sbjct:    1 MHQEVPVKNFKTMLGGTIKACFSGKSAVDWCLQKDLCSDEIDAIHLLNRMLERGLLHHCRLSKLVEPSDTAYYRFPQDHFKVLVDQTGAQQSVRRRLRPNSKTLHGEAALKERWYADVPTLPSDKVRKHGRVLQRLQPRDVTRGLRRYPMVFQGKEAVELLIDTGKAKDTTDALAIGNAFLRAGLFHQVNLRAPLRNDETLYRLAGNQFAILVSRDQVWGSSYHGGTSNARYSSALDDSRVGTV---ISGSDLSDALETKGRSALELATASRYWTSYRASKLYVVNLTVIEGFIDMSEDWDHHVDEMFPTYCECYLTRDKEATTHSTIRSHKTLHPVWNCPVAFVDVDYLDVVRIDLKAQTHLGQDTTIGSIEFDAHE 375          
BLAST of mRNA_F-serratus_M_contig895.20314.1 vs. uniprot
Match: D7G3K7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K7_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.660e-11
Identity = 64/251 (25.50%), Postives = 108/251 (43.03%), Query Frame = 0
Query:  297 LELATSSRYWTSFRASKLYELTLNVVEAFIDMSDDWDSHVDQMYP---------------TYCECYLTRDKEATMQSTHSSTRTLHPVWNCPVAFVDVDYLDMVHIDLKAHTQLGHDITVGSLEFTAHEVMGA----GNQSVIVEFDPGSRRYAECAAAIIKVQFDPAVAGPGEGTEGSKHHRLLIQGARKQEDLANAADVSRSRGSKSHNRRSKTRGSVRRTSFGASAEDMDPAFISVEGCLGCVLLDDD 528
            ++LA +SRYW S+R SK + LT+ + EA + ++    ++     P               T     L +D       T  + +T +PVW+  V   D++Y ++V ++++   ++G +  + S+EF  H+V+G     G     +E D    RY      ++  +FDP VA    G         L +G      +   AD     G K+    +   G           E  +P +I+VEG   C+LLDDD
Sbjct:    1 MDLAHTSRYWKSYRESKTFTLTIYIYEAHLGVNSSISNNSSTGGPXXXXXXXXXGGGPWDTKIVVSLPKDPMGERHETGRAGKTSNPVWDQAVVLRDIEYSELVRVEMRRPRKIGENPVLASVEFEVHDVIGLSLREGASVFQLECDRSRARYG---IILLAFRFDPPVAADVLGALDGVGLASLPRG------VTTPADQGHDEGEKAPAWGAPEAGQQAER----EVEVAEPVYINVEGHFACLLLDDD 238          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig895.20314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3D9_ECTSI1.120e-16663.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3K7_ECTSI1.660e-1125.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000591DEP domainSMARTSM00049DEP_3coord: 168..242
e-value: 4.8E-7
score: 39.4
coord: 39..113
e-value: 8.4E-13
score: 58.5
IPR000591DEP domainPFAMPF00610DEPcoord: 41..111
e-value: 7.8E-12
score: 45.1
IPR000591DEP domainPROSITEPS50186DEPcoord: 37..113
score: 12.447
IPR000591DEP domainPROSITEPS50186DEPcoord: 186..242
score: 9.831
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 292..425
e-value: 1.2E-6
score: 30.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 157..246
e-value: 6.9E-9
score: 37.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 16..117
e-value: 6.2E-15
score: 57.0
NoneNo IPR availablePANTHERPTHR22829DEP DOMAIN PROTEINcoord: 160..241
NoneNo IPR availablePANTHERPTHR22829:SF5INTEGRAL MEMBRANE PROTEIN GPR155coord: 160..241
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 313..412
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 25..117
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 173..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig895contigF-serratus_M_contig895:205096..236994 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig895.20314.1mRNA_F-serratus_M_contig895.20314.1Fucus serratus malemRNAF-serratus_M_contig895 204738..238019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig895.20314.1 ID=prot_F-serratus_M_contig895.20314.1|Name=mRNA_F-serratus_M_contig895.20314.1|organism=Fucus serratus male|type=polypeptide|length=785bp
MKIDGVSVDPSPADDPYATEHVALDIDIDLDELAHKMQTEVRVADYKTVF
GGRIQSCFTGKDAVEWCMRKEFCSNEMDAVHLLNRMLRRGLMHHCNLNKL
MENNATAFYRFPQEHFKMLVDQTGAGRSLRRRLRPRAKTLQGAAALQERW
YADVPTLPAEKVHNLGQVLEMLNCRDIQRGLRRHLDVFPGNELVQLLIES
GVAKDETDALAVGNGFLRAGLFYHIRLKAPLRNDDTLYRLATHQYDLLVN
RDQVMGMSYNGRPGGISADDGKGGSVGVGVHEVKVDGGLDMQGKTALELA
TSSRYWTSFRASKLYELTLNVVEAFIDMSDDWDSHVDQMYPTYCECYLTR
DKEATMQSTHSSTRTLHPVWNCPVAFVDVDYLDMVHIDLKAHTQLGHDIT
VGSLEFTAHEVMGAGNQSVIVEFDPGSRRYAECAAAIIKVQFDPAVAGPG
EGTEGSKHHRLLIQGARKQEDLANAADVSRSRGSKSHNRRSKTRGSVRRT
SFGASAEDMDPAFISVEGCLGCVLLDDDAAGTARRGGSFTSSPLDAVSRK
DSNRGSVHSMAAWSETERANLLPSGGIGAGVNGLRASMISSEVIARRGSA
GSDLPDINEDFAFNEPLPDVSTSGRGDGFGGEGGGSCFSTDSLGGDAAGA
AATTSRGYAQVQGSSSSGSKPIGNRSNGGGSGIEVYGHGNALNIPRAPPG
AIRRRLTWSSSLSTSTRLTGAATGENTDASAAVAAAAGLVDIMEGDSKGV
PSSVDVKRPSSEGHTPTTSPGVSGREAMSSRETY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000591DEP_dom
IPR035892C2_domain_sf
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf