prot_F-serratus_M_contig895.20310.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig895.20310.1
Unique Nameprot_F-serratus_M_contig895.20310.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length244
Homology
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BLAST of mRNA_F-serratus_M_contig895.20310.1 vs. uniprot
Match: D7FKN3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKN3_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 4.560e-41
Identity = 81/125 (64.80%), Postives = 88/125 (70.40%), Query Frame = 0 
Query:   10 GLAVVCLCVPESADAFFIGAGRPVTCQGQVSRRSCGGGGLYMAKHRQNKATKKHVKERPRKTSLSDRNHKPPVYSIEVMTNGNFPGAPPVWELLEEPAEGIDTKASVIEKLASAKWDAEHPVEAA 134
            GL VVC C+  + DAFF G   P +  G       G G L MAKHRQNK TKKHVK RPRK+ LSDRN KP  YSIEV TNGNFPGAPPV+EL  EP EGIDTKASVIE LASA+WDAE   + A
Sbjct:   10 GLVVVCACLAPATDAFFTGVALPSSRAGAARG---GNGALEMAKHRQNKGTKKHVKNRPRKSRLSDRNRKPTDYSIEVNTNGNFPGAPPVFELESEPEEGIDTKASVIEALASAEWDAEQAAKPA 131
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig895.20310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKN3_ECTSI4.560e-4164.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 215..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..243
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24
NoneNo IPR availablePRODOMPD069352coord: 41..84
e-value: 1.0E-4
score: 109.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.786
IPR020526Ribosomal protein L6, chloroplastPFAMPF17257DUF5323coord: 56..103
e-value: 1.0E-7
score: 31.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig895contigF-serratus_M_contig895:154558..160194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig895.20310.1mRNA_F-serratus_M_contig895.20310.1Fucus serratus malemRNAF-serratus_M_contig895 154478..160356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig895.20310.1 ID=prot_F-serratus_M_contig895.20310.1|Name=mRNA_F-serratus_M_contig895.20310.1|organism=Fucus serratus male|type=polypeptide|length=244bp
MASIIPLIVGLAVVCLCVPESADAFFIGAGRPVTCQGQVSRRSCGGGGLY
MAKHRQNKATKKHVKERPRKTSLSDRNHKPPVYSIEVMTNGNFPGAPPVW
ELLEEPAEGIDTKASVIEKLASAKWDAEHPVEAAEAKAAAATMKTSAVTK
LPPKIADEIKEAPADGVIGAAVEKAVAEAITGEVAGVVAGEGGEEVAITD
DVADTVAEVVAKTVTEEVASVVAEAEAKLEEEKAEVGEGGGQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020526Ribosomal_L6_chp