prot_F-serratus_M_contig891.20285.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig891.20285.1
Unique Nameprot_F-serratus_M_contig891.20285.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length240
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig891.20285.1 vs. uniprot
Match: D7FSH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH2_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.320e-12
Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = 0 
Query:  129 AGSGAGPIVDDVPAPAKQAQDIRWLVAQAKAKP-AEGDVWAVLDRQWWLRWQRFTGCDGHKSVPG 192
            AG+G G  + + P P  QAQ IRWLVAQ K K   EG++WAVLD++WW RWQ +TGCD H    G
Sbjct:  444 AGAGVGFEIGEAPPPEAQAQLIRWLVAQEKEKKDCEGNIWAVLDKKWWQRWQLYTGCDEHAHAVG 508
[Close]
BLAST of mRNA_F-serratus_M_contig891.20285.1 vs. uniprot
Match: A0A6H5L229_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L229_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 6.130e-12
Identity = 53/150 (35.33%), Postives = 70/150 (46.67%), Query Frame = 0 
Query:   51 PPVGARDVARCCGDGIGGMKAAGTTVVD--------GDRDPARREEGVDLVEKGKGAERGEEVAQDCGNNDCCDGGGNGGDGRRDSAGSGAGPIVDDVPAPAKQAQDIRWLVAQAKAKPAEGDVWAVLDRQWWLRWQRFTGCDGHKSVPG 192
            P +G   V RC G  +GG +     V          GD D     +G D   KG G+++  E AQ               +     A +G G  + + P P  QAQ IRWLVAQ + K  EG++WAVLD++WW RWQ +TGC  H    G
Sbjct:  313 PALGGPAVRRCYGP-VGGSEVDAADVASTFEAGDAAGDGDARIGTQGEDAY-KGDGSDKQGEDAQT--------------EAAAPEASAGVGFEIGEAPPPEAQAQLIRWLVAQEEEKDCEGNIWAVLDKRWWQRWQLYTGCYEHAHAAG 446
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig891.20285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSH2_ECTSI1.320e-1255.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L229_9PHAE6.130e-1235.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2230.10coord: 133..209
e-value: 5.1E-6
score: 28.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig891contigF-serratus_M_contig891:224271..225282 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig891.20285.1mRNA_F-serratus_M_contig891.20285.1Fucus serratus malemRNAF-serratus_M_contig891 224271..225282 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig891.20285.1 ID=prot_F-serratus_M_contig891.20285.1|Name=mRNA_F-serratus_M_contig891.20285.1|organism=Fucus serratus male|type=polypeptide|length=240bp
QDVGNTCPPTPPQPPPPPHPLLQHAAVKRCFSAFVAEADAAGAVGGETDD
PPVGARDVARCCGDGIGGMKAAGTTVVDGDRDPARREEGVDLVEKGKGAE
RGEEVAQDCGNNDCCDGGGNGGDGRRDSAGSGAGPIVDDVPAPAKQAQDI
RWLVAQAKAKPAEGDVWAVLDRQWWLRWQRFTGCDGHKSVPGRGDGVEGG
DANGDGTCDVASNGGINARVEGDADGGASADVDDEVNGGA
back to top