prot_F-serratus_M_contig8881.20259.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig8881.20259.1
Unique Name	prot_F-serratus_M_contig8881.20259.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	240

Homology

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BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: UPI001A0A62D4 (Tandem-95 repeat protein n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI001A0A62D4)

HSP 1 Score: 164 bits (414), Expect = 6.450e-43
Identity = 108/253 (42.69%), Postives = 160/253 (63.24%), Query Frame = 0

Query:    1 YSATLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGSTEETTALTLDV---LANDSDVDDGDSKTLSSVSVTSG-DGSVSIIDGQLLFDPGSDYDHLAS----------GETATVEV 239
            Y+ATL+DGSALP+WL F+  TRTFSGTP N +VG   + +TATD  G + TD F L   N ND P DL L N S++EN++NGT++G  +  D D GD+ +Y+L ++ADGRF +D +  ++ VA G+LLD E  ++H + VQ +DA G +  + FT+ + D+NE PV ++DS +   + A  + +   LANDSD +      LS ++V +G +G+VS+ +G ++F P + +D  AS           ETATV V
Sbjct:  274 YTATLSDGSALPSWLTFNPETRTFSGTPANKNVGQIAIEITATDNDGEAATDIFNLEVINVNDIPLDLELSNISIDENSSNGTIIGNLSTLDPDVGDTHSYTLLNNADGRFILDGN--KLLVASGNLLDFEVNSTHLIEVQTTDAEGLSITKNFTLLLKDINEAPVPINDSVTANSSRAKIIPIASLLANDSDPE---GTPLSLMAVGNGINGTVSLDNGNVIFTPDTGFDGTASFEYTVSDGVLSETATVTV 521

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BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: UPI00140D5474 (cadherin-like domain-containing protein n=1 Tax=Pseudomonas akapageensis TaxID=2609961 RepID=UPI00140D5474)

HSP 1 Score: 160 bits (406), Expect = 2.010e-41
Identity = 90/168 (53.57%), Postives = 119/168 (70.83%), Query Frame = 0

Query:    1 YSATLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAV 168
            Y+A LA GSALPAWL FDAATRTF+GTPD+ D+G  +VRV ATD  G   + DF L   N  +AP D+ LD ASV+ENAA+GTV+GT + +D D GD  T+ L DDA+GRF +     Q+ V +GSLLDHE+A +H++ V+ +D+ G + D+T TI + +VNE P AV
Sbjct: 1695 YTAILAAGSALPAWLHFDAATRTFTGTPDDPDIGTINVRVVATDNAGAQASSDFALIVVNLPEAPADILLDVASVDENAASGTVIGTLSATDPDNGDEQTFQLLDDANGRFVL--VNNQLQVGNGSLLDHESAVAHNIQVRATDSTGLSFDKTLTIGINNVNEQPSAV 1860

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BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A1W9IZ14_9BACT (Uncharacterized protein n=1 Tax=Nitrospira sp. ST-bin5 TaxID=1978765 RepID=A0A1W9IZ14_9BACT)

HSP 1 Score: 157 bits (396), Expect = 4.190e-40
Identity = 110/221 (49.77%), Postives = 139/221 (62.90%), Query Frame = 0

Query:    8 GSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGST--EETTALTLDVLANDSDVDDGDSKTLSSVSVTSG-------DGSVSIIDGQLL 219
            G+A     + D AT  +S TP  D  GA    VT TD  G + T   ++T    NDAP DLAL   +V ENAANGTVVGT  G+DVD GD+ TY LTD A GRFAIDS+TGQ+TVA+ SLL++EAA SH VTV+V+D+ G T DETFTI + ++NE P AV  S ST  E +   T+  +A+ +DVD GDS T   +S   G        G V+++DG LL
Sbjct: 1919 GAATNGTASIDPATGLWSYTPTADWNGADSFTVTITDDAGNTATQVISVTVTPANDAPTDLALSANTVAENAANGTVVGTITGTDVDTGDTKTYGLTDTAGGRFAIDSTTGQLTVANASLLNYEAATSHTVTVRVTDSGGLTYDETFTINLTNINETPTAVTLSSSTVAENSANGTVVGMASTTDVDAGDSHTYQLMSNAGGRFAIDATTGVVTVVDGSLL 2139

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BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: UPI0019E5C2A9 (Tandem-95 repeat protein n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019E5C2A9)

HSP 1 Score: 155 bits (392), Expect = 1.490e-39
Identity = 104/253 (41.11%), Postives = 159/253 (62.85%), Query Frame = 0

Query:    1 YSATLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGSTEETTALTLDV---LANDSDVDDGDSKTLSSVSVTSGDGS-VSIIDGQLLFDPGSDYDHLAS----------GETATVEV 239
            Y+ATL+DGSALP+WL F+  TRTFSGTP N+ VG   + +TATD  G    D F +   N ND P D+ L N S++EN++NGT++G  +  D DAGD+ +Y+L ++ADGRF +D +  ++ VA G+LLD EA +++ + VQ +DA G +  + FTI++ D+NE PV ++DS +   ++A  + +   L+NDSD +      LS ++V +   S V++ +G ++F P + +D  AS           ETATV V
Sbjct: 4341 YTATLSDGSALPSWLTFNPETRTFSGTPVNEHVGQIAIEITATDNDGEVAQDIFEIEVINVNDIPLDIELSNISLDENSSNGTIIGILSTLDPDAGDTHSYTLLNNADGRFVLDGN--KLLVASGNLLDFEANSTYLIEVQTTDAEGLSITKNFTISLNDINEAPVLINDSLTANSSSAKVIAISYLLSNDSDPE---GTPLSLIAVGNATNSNVTLDNGNVIFTPDTGFDGTASFEYTVSDGVLSETATVTV 4588

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BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A0S4LHV3_9BACT (Uncharacterized protein n=2 Tax=Candidatus Nitrospira nitrificans TaxID=1742973 RepID=A0A0S4LHV3_9BACT)

HSP 1 Score: 147 bits (371), Expect = 9.410e-37
Identity = 88/138 (63.77%), Postives = 105/138 (76.09%), Query Frame = 0

Query:   34 GAFDVRVTATDPHGGSVTD-DFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDD 170
            GA  +R   TD  GG+ T+ D T+T    NDAP DL+L   +V EN+ANGTVVGT +G+D D GD+ TYS TD+A GRFAI+SSTGQITVADGSLL++EAA SH VTV+V+DA G T DETFTIAV +VNE PVA DD
Sbjct: 1160 GARTIRYVLTDGDGGTSTNYDTTVTVTAVNDAPTDLSLSANTVAENSANGTVVGTVSGTDADTGDTKTYSFTDNAGGRFAINSSTGQITVADGSLLNYEAATSHGVTVRVTDAGGLTYDETFTIAVTNVNEAPVAADD 1297

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BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A532F281_9BACT (Cadherin domain-containing protein (Fragment) n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532F281_9BACT)

HSP 1 Score: 138 bits (347), Expect = 1.030e-36
Identity = 97/190 (51.05%), Postives = 123/190 (64.74%), Query Frame = 0

Query:   54 FTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGSTEETTALTLDVLAND--SDVDDGDSK--------------TLSSVSVTSGD--GSVSIIDGQLLFDPGSD 225
            F ++    NDAP DL+L  ++V ENAA GTVVGT +G+D+DA D+ TYSLTD A GRFAIDS+TGQ+TVADGSLL++EAA SH +TV+V+D+ G + DETFTI + +VNEGP   D + +  E T   L   AN   SDVD GDS               TLS V+VT+G       I DG L+F P +D
Sbjct:    2 FKISVTPVNDAPTDLSLSASTVAENAATGTVVGTVSGTDIDASDTKTYSLTDTAGGRFAIDSATGQLTVADGSLLNYEAATSHTLTVRVTDSGGQSYDETFTINLTNVNEGPTGTDATLTLTEDTPQAL-TAANFGFSDVDAGDSLSAVRIDTLPTAGALTLSGVAVTAGQVIAVSDITDGNLIFTPTAD 190

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BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: UPI001C4BB8ED (cadherin domain-containing protein n=1 Tax=Sphingobium lactosutens TaxID=522773 RepID=UPI001C4BB8ED)

HSP 1 Score: 144 bits (364), Expect = 8.220e-36
Identity = 89/163 (54.60%), Postives = 116/163 (71.17%), Query Frame = 0

Query:    3 ATLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSV--TDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNE 163
            ATL +G  LPAWL FDA+   F GTP  +  GA +VR+ A+D   G++  +D FTLT +  NDAP DL +   SV EN+ NGT+VG+ AGSD D+G+ L YSL DDA GRF ID+++G++ VADGSLLD EAAASH++ V+++DAA AT DE F I + DV E
Sbjct: 2602 ATLGNGDPLPAWLNFDASAGRFFGTPPLNFNGAIEVRLVASD---GALLASDSFTLTISPVNDAPFDLVMAGGSVAENSPNGTLVGSFAGSDPDSGEVLHYSLVDDAGGRFVIDAASGELRVADGSLLDFEAAASHNIIVRITDAAFATYDEAFVITITDVPE 2761

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BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A1W9GF15_9BACT (Uncharacterized protein (Fragment) n=2 Tax=Nitrospira TaxID=1234 RepID=A0A1W9GF15_9BACT)

HSP 1 Score: 144 bits (364), Expect = 8.240e-36
Identity = 103/211 (48.82%), Postives = 132/211 (62.56%), Query Frame = 0

Query:   38 VRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGSTEETTALTLDVLANDS--DVDDGDSKTLSSV-------SVTSGDGSVSIIDGQLLFDPGSDYDHLASGETATVEV 239
            V V  TD  G +  + FT+   N N+ P DLAL + +V ENAANGTVVGT +G+D DAGD+ TYS TD A GRFAI+SSTGQITVA+GSLLD+E AASH VTV+V+D+ G T DETFTI + DVNE P  +  S +T    A+   V+   S  D D GD+KT S         ++ S  G +++ +  LL     DY+  A+  T TV V
Sbjct: 2028 VTVRVTDSGGLTYDETFTINLTNVNETPTDLALSSNTVAENAANGTVVGTVSGTDPDAGDTKTYSFTDSAGGRFAINSSTGQITVANGSLLDYETAASHSVTVRVTDSGGLTYDETFTINLTDVNETPTDLALSSNTVAENAVNGTVVGTVSGTDPDAGDTKTYSFTDSAGGRFAINSSTGEITVANSSLL-----DYE-AATSHTVTVRV 2232

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BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A839ABH4_9HYPH (Cadherin domain-containing protein (Fragment) n=2 Tax=Stappia albiluteola TaxID=2758565 RepID=A0A839ABH4_9HYPH)

HSP 1 Score: 144 bits (363), Expect = 9.870e-36
Identity = 101/214 (47.20%), Postives = 139/214 (64.95%), Query Frame = 0

Query:    8 GSALPAWLAFDAATR--TFSGTPDND---DVGA---FDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDS-GSTEETTALTLDVLANDSDVDDGDSKTLSSVSVTSGDGSVS 212
            G A  A    D AT   +F  +PD D   D GA   ++V VTA+D +GG+     ++T  + N+AP D+ L NASV EN+ NGTVVGT   +D DAG+S TY+L D+A GRFAI  +  ++ VADG LLD E A SH VTV+V D+AG TR ETFT++V DVNE PVA DD+  + E+  ++  DVL ND+D + GD+  ++S++ + G  +VS
Sbjct:  110 GGADGALFTIDGATGELSFIASPDFDAPGDAGADNVYEVEVTASDGNGGTSVQTISVTVGDVNEAPTDITLSNASVEENSTNGTVVGTLGAADPDAGESFTYTLLDNAGGRFAIVGN--ELRVADGGLLDFETATSHQVTVEVEDSAGNTRQETFTVSVTDVNEAPVATDDAVAAVEDGGSVPGDVLNNDTDPE-GDTLAVTSIAASRGPVAVS 320

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BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Match: A0A525W892_9BACT (Tandem-95 repeat protein (Fragment) n=1 Tax=Nitrospira sp. CG24E TaxID=1985129 RepID=A0A525W892_9BACT)

HSP 1 Score: 144 bits (362), Expect = 1.340e-35
Identity = 105/225 (46.67%), Postives = 137/225 (60.89%), Query Frame = 0

Query:    4 TLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSVTDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLTYSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATRDETFTIAVGDVNEGPVAVDDSGST--EETTALTLDVLANDSDVDDGDSKTLSSV-------SVTSGDGSVSIIDGQLL 219
            T+ADGS L     ++AAT             +  + V  TD  G +    FT+   N N+ P DL+L   SV ENA +GTVVGT  G+D DAGD+ TYSLTD A GRFAI+S+TG ITVADGSLL++E AASH VTVQV+DAAG T +ETFTI + +VNEGP A+  +G+T  E  T  TL   A+ +D D GD+ T           ++ S  G +++ DG +L
Sbjct:   96 TVADGSMLN----YEAAT-------------SHSITVRTTDAGGLTHDQAFTINLTNVNEGPTDLSLSANSVAENALSGTVVGTITGTDPDAGDTKTYSLTDSAGGRFAINSTTGVITVADGSLLNYEQAASHPVTVQVTDAAGLTYNETFTINLSNVNEGPAAIGLTGNTVAENATNGTLVGTASTADPDAGDTPTYQLTDNAGGRFTINSATGQITVADGSML 303

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig8881.20259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001A0A62D4	6.450e-43	42.69	Tandem-95 repeat protein n=1 Tax=Pleurocapsales cy...	[more]
UPI00140D5474	2.010e-41	53.57	cadherin-like domain-containing protein n=1 Tax=Ps...	[more]
A0A1W9IZ14_9BACT	4.190e-40	49.77	Uncharacterized protein n=1 Tax=Nitrospira sp. ST-...	[more]
UPI0019E5C2A9	1.490e-39	41.11	Tandem-95 repeat protein n=1 Tax=Pleurocapsales cy...	[more]
A0A0S4LHV3_9BACT	9.410e-37	63.77	Uncharacterized protein n=2 Tax=Candidatus Nitrosp...	[more]
A0A532F281_9BACT	1.030e-36	51.05	Cadherin domain-containing protein (Fragment) n=1 ...	[more]
UPI001C4BB8ED	8.220e-36	54.60	cadherin domain-containing protein n=1 Tax=Sphingo...	[more]
A0A1W9GF15_9BACT	8.240e-36	48.82	Uncharacterized protein (Fragment) n=2 Tax=Nitrosp...	[more]
A0A839ABH4_9HYPH	9.870e-36	47.20	Cadherin domain-containing protein (Fragment) n=2 ...	[more]
A0A525W892_9BACT	1.340e-35	46.67	Tandem-95 repeat protein (Fragment) n=1 Tax=Nitros...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002126	Cadherin-like	SMART	SM00112	CA_2	coord: 88..166 e-value: 4.6E-7 score: 39.5
IPR006644	Dystroglycan-type cadherin-like	SMART	SM00736	cadg_13	coord: 1..65 e-value: 8.8E-15 score: 65.1 coord: 69..165 e-value: 0.11 score: 4.9
IPR040853	RapA2, cadherin-like domain	PFAM	PF17803	Cadherin_4	coord: 153..213 e-value: 1.6E-12 score: 47.9
IPR008009	Putative Ig	PFAM	PF05345	He_PIG	coord: 1..46 e-value: 7.6E-12 score: 45.2
None	No IPR available	GENE3D	2.60.40.60		coord: 71..162 e-value: 3.9E-17 score: 64.6
None	No IPR available	PANTHER	PTHR24028:SF146		coord: 29..199
None	No IPR available	PANTHER	PTHR24028	FAMILY NOT NAMED	coord: 29..199
None	No IPR available	PROSITE	PS50268	CADHERIN_2	coord: 67..167 score: 15.066
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10		coord: 1..67 e-value: 3.0E-18 score: 67.4
IPR015919	Cadherin-like superfamily	SUPERFAMILY	49313	Cadherin-like	coord: 1..63
IPR015919	Cadherin-like superfamily	SUPERFAMILY	49313	Cadherin-like	coord: 72..158

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig8881	contig	F-serratus_M_contig8881:3..722 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig8881.20259.1	mRNA_F-serratus_M_contig8881.20259.1	Fucus serratus male	mRNA	F-serratus_M_contig8881 3..722 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig8881.20259.1 ID=prot_F-serratus_M_contig8881.20259.1|Name=mRNA_F-serratus_M_contig8881.20259.1|organism=Fucus serratus male|type=polypeptide|length=240bp
YSATLADGSALPAWLAFDAATRTFSGTPDNDDVGAFDVRVTATDPHGGSV
TDDFTLTTANTNDAPDDLALDNASVNENAANGTVVGTAAGSDVDAGDSLT
YSLTDDADGRFAIDSSTGQITVADGSLLDHEAAASHDVTVQVSDAAGATR
DETFTIAVGDVNEGPVAVDDSGSTEETTALTLDVLANDSDVDDGDSKTLS
SVSVTSGDGSVSIIDGQLLFDPGSDYDHLASGETATVEVT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002126	Cadherin-like_dom
IPR006644	Cadg
IPR040853	RapA2_cadherin-like
IPR008009	He_PIG
IPR013783	Ig-like_fold
IPR015919	Cadherin-like_sf