prot_F-serratus_M_contig888.20257.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig888.20257.1
Unique Nameprot_F-serratus_M_contig888.20257.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length111
Homology
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 2.470e-56
Identity = 86/111 (77.48%), Postives = 95/111 (85.59%), Query Frame = 0
Query:    1 IGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCAD 111
            IGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+P   Y  GRSF+NCVSE  + E C GQ QN+ GECRMDII SE+GYLG+FDSESYGLTWKVRGFC D
Sbjct:  149 IGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKD 259          
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 4.790e-56
Identity = 82/110 (74.55%), Postives = 96/110 (87.27%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCAD 111
            GGDCDELRIQSTG  D++EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE  + ETC+G+ +ND GECRMDII SEMGY+G+FD+ESYGLTWKVRGFC D
Sbjct:   41 GGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKD 150          
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 6.510e-54
Identity = 83/110 (75.45%), Postives = 96/110 (87.27%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCAD 111
            GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK P + YENGRSF+NCVSE  + + CEG  +N+ GECRMDII SE+ YLG+FDSESYG+TWKVRGFC D
Sbjct:  513 GGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKD 622          
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.260e-53
Identity = 82/118 (69.49%), Postives = 95/118 (80.51%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWK--------VRGFCAD 111
            GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK P + YE GRSF+NCVSE  + + CEG  +N+ GECRMDII SE+ YLG+FDSESYG+TWK        VRGFC D
Sbjct:   62 GGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKD 179          
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 7.650e-53
Identity = 83/119 (69.75%), Postives = 95/119 (79.83%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVR---------GFCAD 111
            GGDCDELRIQSTG  D++EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE  + ETC+G  +ND GECRMDII SEMGY+G+FDSESYGLTWKVR         GFC D
Sbjct:   86 GGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKD 204          
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Match: D7FZV0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV0_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 3.570e-45
Identity = 69/112 (61.61%), Postives = 87/112 (77.68%), Query Frame = 0
Query:    1 IGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY-ESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCAD 111
            +GG+C ELRI+ST  +DF E+RGHGG+LYFE+T+VTSWD   + P + Y+ GRSFI CVSE    ++TC     N+ GECRMDII SEMGYLG+  SE+YG+TWKVRGFC+D
Sbjct:    3 VGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKGGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSD 111          
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 1.240e-41
Identity = 69/112 (61.61%), Postives = 88/112 (78.57%), Query Frame = 0
Query:    1 IGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY-ESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCAD 111
            +GG+C ELRI+ST  +DF E+RGHGG+LYFE+T+VTSWD   + P + Y++GRSFI CVSE    ++TC     N+ GECRMDII SEMGYLG+  SE+YG+TWKVRGFC+D
Sbjct:   74 VGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSD 182          
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Match: A0A6H5KES9_9PHAE (MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES9_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 9.220e-38
Identity = 68/112 (60.71%), Postives = 81/112 (72.32%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY--ESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCAD 111
            GGD DELR+ ST  T F  +R HGGSL F +T V SWDT   SP +D  +GRS+I+ +SE   + DETCEG  +N  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC D
Sbjct:   19 GGDADELRLLSTSET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCED 129          
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 1.550e-36
Identity = 68/112 (60.71%), Postives = 81/112 (72.32%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY--ESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCAD 111
            GGD DELR+ ST  T F  +R HGGSL F +T V SWDT   SP +D  +GRS+I+ +SE   + DETCEG  +N  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC D
Sbjct:  125 GGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCED 235          
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 2.730e-36
Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = 0
Query:    2 GGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDE--TCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCAD 111
            GGD D LRIQST   DF E+RG GGSL F  T VTSWDT       +YE GRSFINCV++++  +  +C G+   + GECRMDII S MG +GWFD+ESYGLTWKVRG C+D
Sbjct:  476 GGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSD 586          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig888.20257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM4_ECTSI2.470e-5677.48Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FIU4_ECTSI4.790e-5674.55Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LC73_ECTSI6.510e-5475.45Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5KWQ2_9PHAE1.260e-5369.49MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JGU8_9PHAE7.650e-5369.75MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FZV0_ECTSI3.570e-4561.61Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI1.240e-4161.61Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KES9_9PHAE9.220e-3860.71MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
D7FXE5_ECTSI1.550e-3660.71Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FWE8_ECTSI2.730e-3659.82Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..110
e-value: 3.8E-22
score: 80.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig888contigF-serratus_M_contig888:236377..236709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig888.20257.1mRNA_F-serratus_M_contig888.20257.1Fucus serratus malemRNAF-serratus_M_contig888 236377..236709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig888.20257.1 ID=prot_F-serratus_M_contig888.20257.1|Name=mRNA_F-serratus_M_contig888.20257.1|organism=Fucus serratus male|type=polypeptide|length=111bp
IGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYE
NGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYG
LTWKVRGFCAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold