prot_F-serratus_M_contig888.20255.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig888.20255.1
Unique Nameprot_F-serratus_M_contig888.20255.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length54
Homology
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 9.550e-26
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    1 MYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 54
            MYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA N+VY+NVNHGIIA
Sbjct:  206 MYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIA 259          
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.720e-25
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    1 MYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 54
            +YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA NEVY+NVNHGIIA
Sbjct:  646 LYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIA 699          
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 1.970e-21
Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 0
Query:    1 MYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 54
            M+YGMYSYGHQGGVWT++ MHDN+ YGFDPHDDSDYLTI NN V++N NHGIIA
Sbjct:  289 MWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRNNTVWNNKNHGIIA 342          
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 2.740e-20
Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 MYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 54
            M+YG YSYGH GGVWT+N MHDNH YGFDPHDDSDYLTI+ N  Y+N NHGIIA
Sbjct:  575 MWYGHYSYGHLGGVWTDNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIA 628          
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 6.340e-20
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    1 MYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIA 40
            MYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIA
Sbjct:  174 MYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIA 213          
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 9.530e-20
Identity = 44/54 (81.48%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 MYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 54
            MYYGMYSYGHQGGVWT+N M DN  YGFDPHDDSD LTIA N VY N NHGIIA
Sbjct:  610 MYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIA 663          
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 6.160e-19
Identity = 43/54 (79.63%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 MYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 54
            MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+NN VY N NHGIIA
Sbjct:  394 MYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIA 447          
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 8.440e-19
Identity = 41/54 (75.93%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 MYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 54
            MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA N V+ N NHGIIA
Sbjct:  601 MYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIA 654          
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 9.970e-19
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    1 MYYGMYSYGHQGGVWTNNKMH---DNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 54
            M+YGMYSYGHQGGVWT++ MH   DN+ YGFDPHDDSDYLTI NN V++N  HGIIA
Sbjct:  354 MWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRNNTVWNNKKHGIIA 410          
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 2.940e-18
Identity = 40/54 (74.07%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 MYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 54
            MYYG YS+GH GG+WT N+MHDN QYGFDPHDDSD L IA N V+ N NHGIIA
Sbjct:  662 MYYGHYSFGHDGGIWTGNQMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIA 715          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig888.20255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR8_ECTSI9.550e-2688.89Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LC73_ECTSI2.720e-2590.74Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FWW1_ECTSI1.970e-2179.63Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G257_ECTSI2.740e-2077.78Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FIU4_ECTSI6.340e-2097.50Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FWE8_ECTSI9.530e-2081.48Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7G8D9_ECTSI6.160e-1979.63Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JNF5_9PHAE8.440e-1975.93MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5JNF4_9PHAE9.970e-1973.68MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LDB5_ECTSI2.940e-1874.07Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 4..52
e-value: 7.9E-6
score: 25.8
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..54
e-value: 3.5E-19
score: 70.8
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 3..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig888contigF-serratus_M_contig888:183996..184376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig888.20255.1mRNA_F-serratus_M_contig888.20255.1Fucus serratus malemRNAF-serratus_M_contig888 183989..184376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig888.20255.1 ID=prot_F-serratus_M_contig888.20255.1|Name=mRNA_F-serratus_M_contig888.20255.1|organism=Fucus serratus male|type=polypeptide|length=54bp
MYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNH
GIIA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence