prot_F-serratus_M_contig88.20184.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig88.20184.1
Unique Nameprot_F-serratus_M_contig88.20184.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length288
Homology
BLAST of mRNA_F-serratus_M_contig88.20184.1 vs. uniprot
Match: D7FNT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT9_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 1.040e-50
Identity = 102/195 (52.31%), Postives = 124/195 (63.59%), Query Frame = 0
Query:   99 QSPFSEEMLGAIRTAIAILTKRLQRDTPVTSSEFERFESAVAIIVEDALPKQELPTQAIPPPPSLPSGVSIPP---WAEPKATPDGDSVLDDDDV--SEGPGWDP-KGGYGLPRGVRNSYVIDGMGKMNPEEYQEALRQKVIARAQSARKTGSYGNISAKEYIAFLGKNPKSGDEVFESHKKAVAEKPNEDFGQY 287
            +SPFSE +   +R AI IL  RLQR+ P++  EFERFESAV +IVEDALP Q+LP+ A P         +  P          P+ DS         +EGP WD  K  YGLP G RN+Y ID M KMNPEEYQ ALR+KV+ RAQS RKTGSYGNI + EY+ FLGKNPK+GDE F+ +++ V  K  EDF  Y
Sbjct:    6 ESPFSESLQEELRVAIKILAARLQREKPMSRQEFERFESAVGVIVEDALPLQKLPSPASPASXEAAXXXAAAPPRLAVTQSPVPNADSXXXXXXXFETEGPEWDAEKVQYGLPMGARNTYDIDDMEKMNPEEYQAALREKVVERAQSVRKTGSYGNIVSNEYLKFLGKNPKTGDEKFKKNEEFVKSKGREDFRSY 200          
BLAST of mRNA_F-serratus_M_contig88.20184.1 vs. uniprot
Match: A0A836C7S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S9_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.610e-29
Identity = 84/241 (34.85%), Postives = 128/241 (53.11%), Query Frame = 0
Query:   50 SYADKLR---EARAAKEEARSRRTDSSVIPAVSPAPSAAVTESGRGAPTMDSQSPFSEEMLGAIRTAIAILTKRLQRDTPVTSSEFERFESAVAIIVEDALPKQELPTQAIPPPPSLPSGVSIPPWAEPKATPDGDSVLDDDDVSEGPGWDPKGGYGLPRGVRNSYVIDGMGKMNPEEYQEALRQKVIARAQSARKTGSYGNISAKEYIAFLGKNPKSGDEVFESHKKAVAEKPNEDFGQY 287
            SY ++L+   EA+AAK++A          P  + AP+     +    P   + +PF++EM   ++TAI +L++RL+   P+   EF+RFE A+  I++DA+P                                     +  + SEGP WD   GYG+P GVRNSY IDGM  M+P++YQ ALR+KV+ R   ARKTG+YGN +A  Y++FL K+P      ++  ++A   +P EDF +Y
Sbjct:   41 SYMERLKAAQEAKAAKKQA--------AAPPAAVAPATXXXVAAVSEPLSAAAAPFTDEMQEHLQTAINLLSRRLKSGVPLNRPEFDRFEEAIDAIIKDAVPHLAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGME-SEGPAWDASKGYGMPVGVRNSYTIDGMDDMSPDDYQAALREKVLKRVTKARKTGNYGNRAANAYLSFLDKSP-----TWDVKEEA---EPEEDFTEY 264          
BLAST of mRNA_F-serratus_M_contig88.20184.1 vs. uniprot
Match: A0A7S0BY33_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY33_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.260e-13
Identity = 59/205 (28.78%), Postives = 102/205 (49.76%), Query Frame = 0
Query:   86 VTESGRGAPTMDSQSP------FSEEMLGAIRTAIAILTKRLQRDTP--VTSSEFERFESAVAIIVEDALPKQELPTQAIPPPPSLPSGVSIPPW--------AEPKATPDGDSVLD---------------DDDVSEGPGWDPKGGYGLPRGVRNSYVIDGMGKMNPEEYQEALRQKVIARAQSARKTGSYGNISAKEYIAFLG 259
            + E+ R  PT D          F +E+L  +  ++ +L KR+ +D P  + +S+   FE  ++ I+ +   K + P +    PP++P+                 P  TP     ++               D  + EGP +  KGG GL  G +N+YVI+GM +M+PEEY+EAL+  + AR    R+TG++GN+S++ Y++ +G
Sbjct:   11 IAEARRKFPTEDENEDDAPPKIFEDEILNDMSGSLELLEKRV-KDGPGSLDASDVAEFELMMSRILGEMKAKVKSPIE----PPAVPAXXXXXXXXXXXXXTEVAPAPTPVAPQAMEQYGFESEKQAGYGVTDMSLDEGPAYTGKGGMGLASGTKNTYVIEGMDEMSPEEYREALQGSISARQDKRRETGTFGNMSSENYLSAIG 210          
BLAST of mRNA_F-serratus_M_contig88.20184.1 vs. uniprot
Match: A0A7S1UWT3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWT3_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.460e-9
Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 0
Query:  192 EGPGWDPKGGYGLPRGVRNSYVIDGMGKMNPEEYQEALRQKVIARAQSARKTGSYGNISAKEYIAFLGKNPKSG 265
            EGP +   G  G P G RN+YVIDGM +M+PEEY++AL+Q V+A+ +  RK+G  GN  +  Y+  L  +  +G
Sbjct:  156 EGPAY--TGTMGQPAGTRNTYVIDGMDEMSPEEYRQALQQSVVAKQRERRKSGMAGNYGSLSYMNSLSNSGDTG 227          
BLAST of mRNA_F-serratus_M_contig88.20184.1 vs. uniprot
Match: A0A7S1BWX8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BWX8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.230e-7
Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
Query:  187 DDDVSEGPGWDPKGGYGLPRGVRNSYVIDGMGKMNPEEYQEALRQKVIARAQSARKTGSYGNISAKEYIAFLG 259
            +D+   G  +D KGG G+ RG RN+YVI GM  M PEEY++AL++ V  R    R     GN ++  Y+  +G
Sbjct:   83 EDNDEFGSPYDGKGGMGMARGTRNTYVIPGMEDMEPEEYRKALQKSVSDRQAKRRTEQLVGNRASHNYLESIG 155          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FNT9_ECTSI1.040e-5052.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7S9_9STRA1.610e-2934.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0BY33_9STRA1.260e-1328.78Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1UWT3_9STRA2.460e-944.59Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1BWX8_9STRA5.230e-741.10Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..68
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..287
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig88contigF-serratus_M_contig88:845391..857385 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig88.20184.1mRNA_F-serratus_M_contig88.20184.1Fucus serratus malemRNAF-serratus_M_contig88 845316..858130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig88.20184.1 ID=prot_F-serratus_M_contig88.20184.1|Name=mRNA_F-serratus_M_contig88.20184.1|organism=Fucus serratus male|type=polypeptide|length=288bp
MRKSIASAIGAAVLFVLPFVGGFTSPRIAARLTATGGGLQQRVSATPIMS
YADKLREARAAKEEARSRRTDSSVIPAVSPAPSAAVTESGRGAPTMDSQS
PFSEEMLGAIRTAIAILTKRLQRDTPVTSSEFERFESAVAIIVEDALPKQ
ELPTQAIPPPPSLPSGVSIPPWAEPKATPDGDSVLDDDDVSEGPGWDPKG
GYGLPRGVRNSYVIDGMGKMNPEEYQEALRQKVIARAQSARKTGSYGNIS
AKEYIAFLGKNPKSGDEVFESHKKAVAEKPNEDFGQY*
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