prot_F-serratus_M_contig88.20159.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig88.20159.1
Unique Nameprot_F-serratus_M_contig88.20159.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length329
Homology
BLAST of mRNA_F-serratus_M_contig88.20159.1 vs. uniprot
Match: D7FV42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV42_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 5.260e-49
Identity = 86/143 (60.14%), Postives = 107/143 (74.83%), Query Frame = 0
Query:    3 RVQSWKTLYHKMEFGVADRPQNFNQTD-ASVVLDVPASWGRNAEGRQSKEEFEAQMRAHVEAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDVEADFCCERCRELRNIEQETGSADPEAVRCAICPVIHG 144
            RVQ WK LY+K+ FGVADRP NFN+ D A     +PASW R+ +GRQSKEE+EA+ RA VE ANKEDAVCMVCFDG+TD++ ++ IVYCDGC MSVH  CYG++D +ADF C+RC  LR +E E+     + V C +CP IHG
Sbjct:  816 RVQMWKRLYNKLHFGVADRPLNFNKIDVADCDSSIPASWRRDVDGRQSKEEYEAERRAAVEQANKEDAVCMVCFDGSTDESGNLTIVYCDGCDMSVHTDCYGIQDPKADFVCDRCTRLRELEAESKQTTGDEVNCFLCPNIHG 958          
BLAST of mRNA_F-serratus_M_contig88.20159.1 vs. uniprot
Match: A0A6H5LHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHH7_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 5.730e-38
Identity = 75/142 (52.82%), Postives = 93/142 (65.49%), Query Frame = 0
Query:    3 RVQSWKTLYHKMEFGVADRPQNFNQTDASVVLDVPASWGRNAEGRQSKEEFEAQMRAHVEAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDVEADFCCERCRELRNIEQETGSADPEAVRCAICPVIHG 144
            RVQ WK LY+K+ FGVADRP NFN+                     SKEE+EA+ RA VE ANKEDAVCMVCFDG+TD++ ++ IVYCDGC MSVH  CYG++D +ADF C+RC  LR +E  +     + V C +CP IHG
Sbjct:  738 RVQMWKRLYNKLHFGVADRPLNFNK---------------------SKEEYEAERRAAVEQANKEDAVCMVCFDGSTDESGNLTIVYCDGCDMSVHTDCYGIQDPKADFVCDRCTRLRELEAGSKQMTGDEVNCFLCPNIHG 858          
BLAST of mRNA_F-serratus_M_contig88.20159.1 vs. uniprot
Match: A0A7S1G3S2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G3S2_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.400e-5
Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   63 AANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDV-EADFCCERCRELRNIEQETGSADPEAVRCAIC 139
            A   +DAVC+VC DGT  D    +I++C+ C ++VHQ CYGV  V E D+ C  C    ++++     D   VRCA+C
Sbjct:   21 AGGDDDAVCVVCMDGTVTDGN--EILFCEKCDVAVHQMCYGVAVVPEDDWYCTPC----DMDE-----DVRTVRCALC 87          
BLAST of mRNA_F-serratus_M_contig88.20159.1 vs. uniprot
Match: A0A0B1P294_UNCNE (Putative phd-finger domain-containing protein n=1 Tax=Uncinula necator TaxID=52586 RepID=A0A0B1P294_UNCNE)

HSP 1 Score: 57.0 bits (136), Expect = 2.770e-5
Identity = 30/91 (32.97%), Postives = 47/91 (51.65%), Query Frame = 0
Query:   55 AQMRAHVEAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDV-EADFCCERCRELRNIEQETGSADPEAVRCAICPVIHG 144
            A +    +A  ++D+ C +C DG  ++     IV+CDGC ++VHQHCYGV  + E  + C +C+ +       G   P    C  CP + G
Sbjct:  421 AAVNGEAQAGEEQDSRCAICDDGDCENTN--AIVFCDGCDLAVHQHCYGVPFIPEGQWLCRKCQLI-------GRGVPT---CIFCPNLDG 499          
BLAST of mRNA_F-serratus_M_contig88.20159.1 vs. uniprot
Match: A0A7S0IHN2_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IHN2_MICPS)

HSP 1 Score: 56.6 bits (135), Expect = 4.220e-5
Identity = 32/80 (40.00%), Postives = 41/80 (51.25%), Query Frame = 0
Query:   71 CMVCFDGTTDDNKDI---QIVYCDGCGMSVHQHCYGVKDVEAD---FCCERCRELRNIEQETGSADPEAVRCAICPVIHG 144
            C VC     DD++D    Q+V CDGCG+SVHQ CYG+ ++  D   F C  C       + TG    E   C +CPV  G
Sbjct:  740 CAVC-----DDDRDFDFDQLVTCDGCGISVHQSCYGIPEIPDDAVGFLCNAC-------EHTGGDTSETPLCVLCPVEGG 807          
BLAST of mRNA_F-serratus_M_contig88.20159.1 vs. uniprot
Match: C1E3U0_MICCC (Set domain protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E3U0_MICCC)

HSP 1 Score: 56.6 bits (135), Expect = 4.330e-5
Identity = 32/80 (40.00%), Postives = 41/80 (51.25%), Query Frame = 0
Query:   71 CMVCFDGTTDDNKDI---QIVYCDGCGMSVHQHCYGVKDVEAD---FCCERCRELRNIEQETGSADPEAVRCAICPVIHG 144
            C VC     DD++D    Q+V CDGCG+SVHQ CYG+ ++  D   F C  C       + TG    E   C +CPV  G
Sbjct:  712 CAVC-----DDDRDFDFDQLVTCDGCGISVHQSCYGIPEIPDDAVGFLCNAC-------EHTGGDTSETPLCVLCPVEGG 779          
BLAST of mRNA_F-serratus_M_contig88.20159.1 vs. uniprot
Match: A0A2S4PYY1_9PEZI (Uncharacterized protein n=1 Tax=Erysiphe pulchra TaxID=225359 RepID=A0A2S4PYY1_9PEZI)

HSP 1 Score: 56.2 bits (134), Expect = 5.140e-5
Identity = 24/64 (37.50%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   55 AQMRAHVEAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQHCYGVKDV-EADFCCERCR 117
            A +    +A +++D+ C +C DG  ++     IV+CDGC ++VHQHCYGV  + E  + C +C+
Sbjct:  413 AAVNGEAQAGDEQDSRCAICDDGDCENTN--AIVFCDGCDLAVHQHCYGVPFIPEGQWLCRKCQ 474          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FV42_ECTSI5.260e-4960.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LHH7_9PHAE5.730e-3852.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1G3S2_9STRA2.400e-541.03Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A0B1P294_UNCNE2.770e-532.97Putative phd-finger domain-containing protein n=1 ... [more]
A0A7S0IHN2_MICPS4.220e-540.00Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
C1E3U0_MICCC4.330e-540.00Set domain protein n=1 Tax=Micromonas commoda (str... [more]
A0A2S4PYY1_9PEZI5.140e-537.50Uncharacterized protein n=1 Tax=Erysiphe pulchra T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 70..117
e-value: 3.7E-4
score: 29.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 54..124
e-value: 4.6E-14
score: 53.7
NoneNo IPR availablePFAMPF13831PHD_2coord: 86..117
e-value: 1.9E-9
score: 36.9
NoneNo IPR availablePANTHERPTHR13793PHD FINGER PROTEINScoord: 52..142
NoneNo IPR availablePANTHERPTHR13793:SF107BR140, ISOFORM Acoord: 52..142
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 71..116
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 51..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig88contigF-serratus_M_contig88:433545..436673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig88.20159.1mRNA_F-serratus_M_contig88.20159.1Fucus serratus malemRNAF-serratus_M_contig88 433543..436673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig88.20159.1 ID=prot_F-serratus_M_contig88.20159.1|Name=mRNA_F-serratus_M_contig88.20159.1|organism=Fucus serratus male|type=polypeptide|length=329bp
LGRVQSWKTLYHKMEFGVADRPQNFNQTDASVVLDVPASWGRNAEGRQSK
EEFEAQMRAHVEAANKEDAVCMVCFDGTTDDNKDIQIVYCDGCGMSVHQH
CYGVKDVEADFCCERCRELRNIEQETGSADPEAVRCAICPVIHGVDPHIV
PPLLQFPADAPQLQQLAEQASLSHSLISHSLISSVVDVYAPGGDGATTSA
SLSALETAAASNARATWEGAGSSGFGAGGEPSAWQALVQAHAQQAALGFH
SGGMGVGAASVDQAGALVSVSSAAVDSAEEVDVSAPSPSYVRPKTPLLPP
RSAPERELACCICFGTDGSLLDCGITECG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD