prot_F-serratus_M_contig88.20157.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig88.20157.1
Unique Nameprot_F-serratus_M_contig88.20157.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length859
Homology
BLAST of mRNA_F-serratus_M_contig88.20157.1 vs. uniprot
Match: A0A6H5LHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHH7_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 3.000e-158
Identity = 376/762 (49.34%), Postives = 457/762 (59.97%), Query Frame = 0
Query:   89 PKELKKSNNKCHICSRKGGVVVQCSYGLSP-----------CERWMHPMCAAQNSGHSRRLSPEEAEATRFKSLYAFVCNDHVAACLRLLSSGHWLDFLSLYRMRAELDRARVLFDCVLRREKIKRQLHRTSSDLFDTTLAHLRASAIAGAQALRERLDNINAAXXXXXXXXXXXXXXXXXXXXGDVGSXXXXXXXXXXXXXXXXXXXXXXXTXEAARTAAATRVSARGSSKKGGETKIVAAIESVPWYGKYSLVEDNALTLPE---NPEMSYRPKMARAG-DLGSSEFGRVRKKTLKAEEADGLKAGATDARRVFTAADSRKGGFERKGVSSGGGKGDXXXXXXXXXXXXXXXXXXXXXXKRKHSSGADGGREKWPVISSAPAKRRKALWAPGKRPLAGREGSHALSKAAAEKLVDSCVESLPLQGIAAS-LLERKGGTSDCSRAFPGHFGGLFKKLVGSCNVEPLMKARKAHKEAHPGPHREIPGLASPQQLLRDRQLKELCDTICEFRVEKEEGDPRWESGRAKPDDGKRDLGELFDEAPSRDSYPEYYAKVSTVMDLKTVKNKVLEHKYASIDDLVQDIAVMYSNAQAIEHAQATKDAERMLGLAQRIAQRLRDEEREGKAHRQTKLEEPEESPAASRPP--------HIFCAKCDRLRAQP-----SGKALPLDIRKESYWFCDACVSASPETLTGHRIGVFWDGPGKWLAATINGYEPLSGKHKIVYWVDGHWEFVSLGSPGSRISYHHPQPPRSL 821
            PKE+KK + KC IC RK G VV C+                CE+WMHPMCAA    H R L PEEAE T FK  YA  C +H A CLR LS             R +LDRARVLFDCVLRREKIKRQLHRTSSDLFDT LAH RA+  AGA  L ERL+ I AAXXXXXXXXX                       XXXXXXXXXXXXXXXX X                              +VPWYGKY+ +E+NALTLPE   NP+++ R K+ R+G DLG+SEFGRVRKKTLKAEEA                                G    XXXXXXXXXXXXXXXXXXXXXX     + A    E+WPV  +             +RP+AGREGSH  S AAAE+LVDSC+ + PL+GIAA+ LL+R+  ++   R  P HFG +   LVG  NV PL +AR+A+ +AHP P  E+P   S +QLL DRQL E+ + I + RVE+EE DPRWESGR KPDDG RDLGELF+EAPS DSYPEY+AKV  +MDL T++ KVL+ +Y+S++ L+ D+A+MYSNAQ I H QATKD +++L LAQ   +RLR E +EG   R+ +L + + +  + +P          I CAKC +LR  P      G+      +KE YWFC++CV+ SP+  TG  IGV     GKW  AT+ GYEPLSGKH+++Y  D  WEF+SLG P + I Y  P PP SL
Sbjct: 1702 PKEIKKVH-KCDICKRKNGAVVPCTPAARRGGGGATAQDRVCEKWMHPMCAANAGRHCRTLPPEEAEKTPFKFKYAVTCQEHTALCLRQLS-------------RTDLDRARVLFDCVLRREKIKRQLHRTSSDLFDTCLAHFRAATAAGAANLGERLEAIGAAXXXXXXXXXALEPAPALDSSSGSDRQRLIMSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELAAAVPWYGKYTALEENALTLPEVPKNPDLTIRLKLPRSGSDLGASEFGRVRKKTLKAEEA--------------------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPA----ERWPVXGT-------------QRPVAGREGSHTRSVAAAERLVDSCIGAAPLEGIAAAVLLQRRSSSASGCRRVPEHFGKVLANLVGPRNVRPLTEARRAYVKAHPRP--ELPPPPSQEQLLLDRQLMEMYNVISQKRVEREENDPRWESGRVKPDDGMRDLGELFEEAPSEDSYPEYHAKVKNIMDLNTIRTKVLDREYSSVEGLLSDVALMYSNAQVIRHEQATKDGKQLLALAQATVERLRRERQEG-TPRKDRLRQQQSASGSEQPAAAVFGTGLRINCAKCTKLRRDPPLAATGGRPSMACTKKERYWFCESCVTESPDAFTGRGIGVCRQ-DGKWKMATVRGYEPLSGKHEVLYRGDIPWEFLSLGDPRNHIRYCQPVPPASL 2396          
BLAST of mRNA_F-serratus_M_contig88.20157.1 vs. uniprot
Match: D7FV42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV42_ECTSI)

HSP 1 Score: 376 bits (966), Expect = 6.100e-108
Identity = 294/750 (39.20%), Postives = 359/750 (47.87%), Query Frame = 0
Query:   89 PKELKKSNNKCHICSRKGGVVVQCSYGLSP-----------CERWMHPMCAAQNSGHSRRLSPEEAEATRFKSLYAFVCNDHVAACLRLLSSGHWLDFLSLYRMRAELDRARVLFDCVLRREKIKRQLHRTSSDLFDTTLAHLRASAIAGAQALRERLDNINAAXXXXXXXXXXXXXXXXXXXXGDVGSXXXXXXXXXXXXXXXXXXXXXXXTXEAARTAAATRVSARGSSKKGGETKIVAAIESVPWYGKYSLVEDNALTLPENPEMSYRPKMARAG-DLGSSEFGRVRKKTLKAEEADGLKAGATDARRVFTAADSRKGGFERKGVSSGGGKGDXXXXXXXXXXXXXXXXXXXXXXKRKHSSGADGGREKWPVISSAPAKRRKALWAPGKRPLAGREGSHALSKAAAEKLVDSCVESLPLQGIAASLLERKGGTSDCSRAFPGHFGGLFKKLVGSCNVEPLMKARKAHKEAHPGPHREIPGLASPQQLLRDRQLKELCDTICEFRVEKEEGDPRWESGRAKPDDGKRDLGELFDEAPSRDSYPEYYAKVSTVMDLKTVKNKVLEHKYASIDDLVQDIAVMYSNAQAIEHAQATKDAERMLGLAQRIAQRLRDEEREGKAHRQTKLEEPEESPAASRPPHIFCAKCDRLRAQP-----SGKALPLDIRKESYWFCDACVSASPETLTGHRIGVFWDGPGKWLAATINGYEPLSGKHKIVYWVDGHWEFVSLGSPGSRISYHHPQPPRSL 821
            PKE+KK + KC IC RK G VV C+                CE+WMHPMCAA    H R LSPEEAE T FK  YA  C +H A CLR LSSGHW+DFLSLY++R +LDRARVLFDCVLRREKIKRQLHRTSSDLFDT L                                                                                                                            NP+++ R K+ R+G DLG+SEFGRVRKKTLKAEEA                                GG   XXXXXXXXXXXXXXXXXXXXXX    +  A    E+WPV+S+APA    A  A G       EG                       G+  S+               G  GG  + LV              H+    G HR   G ASP+ +    +L +         VE+EE DPRWESGR KPDDG RDLGELF+EAPS DSYPEY+AKV  +MDL TV+ KVL+ +Y+S++ L+ D+A+MYSNAQ I H QATKD +++L LAQ   +RLR E +EG   R+ +L + + +  +          C +LR  P      G+      +KE YWFC++CV+ SP++ TG  IGV     GKW  AT+ GYEPLSGKH+++Y  D  WEF+SLG P + I Y  P PP SL
Sbjct: 1410 PKEIKKIH-KCDICKRKNGAVVPCTPAARRGGGGATAQDRVCEKWMHPMCAANAGRHCRTLSPEEAEKTPFKFKYAVTCQEHTALCLRQLSSGHWVDFLSLYKLRTDLDRARVLFDCVLRREKIKRQLHRTSSDLFDTCL----------------------------------------------------------------------------------------------------------------------------NPDLTIRLKLPRSGSDLGASEFGRVRKKTLKAEEA--------------------------------GGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPA----ERWPVVSTAPAYEAAAAVAAGDGEAGRGEG-----------------------GVPHSV---------------GGGGGAARGLV--------------HRGRTAGGHRG--GGASPEAVFFRFRLPQG--------VEREENDPRWESGRVKPDDGMRDLGELFEEAPSEDSYPEYHAKVKNIMDLNTVRTKVLDREYSSVEGLLSDVALMYSNAQVIRHEQATKDGKQLLDLAQTTVERLRRERKEG-TPRKDRLRQQQSASGSE---------CTKLRRDPPPAATGGRPSKACTKKERYWFCESCVTESPDSFTGRGIGVCRR-DGKWKMATVRGYEPLSGKHEVLYRGDIPWEFLSLGDPCNHIRYCQPVPPASL 1925          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig88.20157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LHH7_9PHAE3.000e-15849.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV42_ECTSI6.100e-10839.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 274..294
NoneNo IPR availableCOILSCoilCoilcoord: 228..248
IPR001487BromodomainSMARTSM00297bromo_6coord: 569..690
e-value: 2.4E-9
score: 47.0
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 605..665
e-value: 4.2E-12
score: 46.0
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 603..673
score: 12.789
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 50..162
e-value: 2.0E-5
score: 26.6
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 564..697
e-value: 4.2E-17
score: 64.0
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 606..691
IPR027180Chromatin structure-remodeling complex subunit RSC1/RSC2/RSC4PANTHERPTHR16062:SF19POLYBROMOcoord: 597..690
IPR037382Remodelling complex subunit Rsc/polybromoPANTHERPTHR16062SWI/SNF-RELATEDcoord: 597..690

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig88contigF-serratus_M_contig88:421557..431617 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig88.20157.1mRNA_F-serratus_M_contig88.20157.1Fucus serratus malemRNAF-serratus_M_contig88 421028..431626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig88.20157.1 ID=prot_F-serratus_M_contig88.20157.1|Name=mRNA_F-serratus_M_contig88.20157.1|organism=Fucus serratus male|type=polypeptide|length=859bp
MDAVDVGDGDGEGEEGASAGGGGTWSKKPAHVAVAGKVPRGGGAASGAGT
GVGKGKAASVCAKTAETKGITKGKAASPCAKTADTKGIPKELKKSNNKCH
ICSRKGGVVVQCSYGLSPCERWMHPMCAAQNSGHSRRLSPEEAEATRFKS
LYAFVCNDHVAACLRLLSSGHWLDFLSLYRMRAELDRARVLFDCVLRREK
IKRQLHRTSSDLFDTTLAHLRASAIAGAQALRERLDNINAAAATATEVAA
AAAAAAAAAERGDVGSGARGRAAVSRAREEADAAAAAAATAEAARTAAAT
RVSARGSSKKGGETKIVAAIESVPWYGKYSLVEDNALTLPENPEMSYRPK
MARAGDLGSSEFGRVRKKTLKAEEADGLKAGATDARRVFTAADSRKGGFE
RKGVSSGGGKGDIGRSGRGGGGGDRSIAEGGVGDKRKHSSGADGGREKWP
VISSAPAKRRKALWAPGKRPLAGREGSHALSKAAAEKLVDSCVESLPLQG
IAASLLERKGGTSDCSRAFPGHFGGLFKKLVGSCNVEPLMKARKAHKEAH
PGPHREIPGLASPQQLLRDRQLKELCDTICEFRVEKEEGDPRWESGRAKP
DDGKRDLGELFDEAPSRDSYPEYYAKVSTVMDLKTVKNKVLEHKYASIDD
LVQDIAVMYSNAQAIEHAQATKDAERMLGLAQRIAQRLRDEEREGKAHRQ
TKLEEPEESPAASRPPHIFCAKCDRLRAQPSGKALPLDIRKESYWFCDAC
VSASPETLTGHRIGVFWDGPGKWLAATINGYEPLSGKHKIVYWVDGHWEF
VSLGSPGSRISYHHPQPPRSLALSSPGAKRKAEDRLHPPPTAAGDTRVDA
KSAKIPRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR013083Znf_RING/FYVE/PHD
IPR036427Bromodomain-like_sf
IPR027180RSC1/2/4
IPR037382Rsc/polybromo