prot_F-serratus_M_contig876.20121.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig876.20121.1
Unique Nameprot_F-serratus_M_contig876.20121.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length122
Homology
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Match: D7G418_ECTSI (Ribonucleoside-diphosphate reductase small chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G418_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 7.950e-70
Identity = 106/122 (86.89%), Postives = 114/122 (93.44%), Query Frame = 0
Query:    1 MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEKSFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMDLISLQGKTNFFEKRVGEYQKAG 122
            MPGLTFSNEMISRDEGLHCDFAC+LF  LENKPSRE V++I+ +AVEVEKSFICGALPCSLIGMNA VM+QYIEFVAD LLGSLGY  +YGT+NPFDWMDLISLQGKTNFFEKRVGEYQKAG
Sbjct:  362 MPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVREAVEVEKSFICGALPCSLIGMNAGVMSQYIEFVADRLLGSLGYGKSYGTQNPFDWMDLISLQGKTNFFEKRVGEYQKAG 483          
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Match: A0A2I0B0N4_9ASPA (Ribonucleoside-diphosphate reductase small chain n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B0N4_9ASPA)

HSP 1 Score: 199 bits (505), Expect = 5.510e-61
Identity = 90/122 (73.77%), Postives = 104/122 (85.25%), Query Frame = 0
Query:    1 MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEKSFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMDLISLQGKTNFFEKRVGEYQKAG 122
            MPGL+FSNE+ISRDEGLHCDFAC L+ LL NK S E V  I++ AVE+E+ F+C ALPC+L+GMNA +M+QYIEFVAD LL +LGYE  YG  NPFDWM+LISLQGKTNFFEKRVGEYQKAG
Sbjct:  199 MPGLSFSNELISRDEGLHCDFACLLYSLLNNKLSDERVREIVSDAVEIEREFVCDALPCALVGMNANLMSQYIEFVADRLLAALGYEKMYGVSNPFDWMELISLQGKTNFFEKRVGEYQKAG 320          
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Match: A0A7S2CQR3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQR3_9STRA)

HSP 1 Score: 192 bits (488), Expect = 1.210e-60
Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 0
Query:    1 MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEKSFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMDLISLQGKTNFFEKRVGEYQKAG 122
            MPGLTFSNE+ISRDEGLHCDFACEL+ +LE+    + +  IITQAVEVEKSF+C ALP SLIGMN  +MAQYIEF AD LL +LG    Y TKNPFDWMDLISL+GKTNFFEKRVGEYQKAG
Sbjct:   27 MPGLTFSNELISRDEGLHCDFACELYAMLESPLPPDRLAQIITQAVEVEKSFVCDALPVSLIGMNNELMAQYIEFCADRLLVALGNPKHYNTKNPFDWMDLISLEGKTNFFEKRVGEYQKAG 148          
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Match: A0A835VDE6_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835VDE6_VANPL)

HSP 1 Score: 190 bits (483), Expect = 3.220e-60
Identity = 87/121 (71.90%), Postives = 99/121 (81.82%), Query Frame = 0
Query:    1 MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEKSFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMDLISLQGKTNFFEKRVGEYQKA 121
            MPGLTFSNE+ISRDEGLHCDFAC L+ LL  K S E V  I+  AV++EK F+C ALPC+L+GMNA +M+QYIEFVAD LLG+L Y   Y   NPFDWM+LISLQGKTNFFEKRVGEYQKA
Sbjct:    1 MPGLTFSNELISRDEGLHCDFACLLYSLLNAKLSEERVREIVADAVDIEKEFVCDALPCALVGMNADLMSQYIEFVADRLLGALNYSKMYDASNPFDWMELISLQGKTNFFEKRVGEYQKA 121          
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Match: A0A7J6X3S5_THATH (Ribonucleoside-diphosphate reductase small chain n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A0A7J6X3S5_THATH)

HSP 1 Score: 196 bits (497), Expect = 1.010e-59
Identity = 87/121 (71.90%), Postives = 105/121 (86.78%), Query Frame = 0
Query:    1 MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEKSFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMDLISLQGKTNFFEKRVGEYQKA 121
            MPGLTFSNE+ISRDEGLHCDFAC L+ LL+NK S E V  I++ AVE+E+ F+C A+PC+L+GMN  +M+QYIEFVAD L+G+LGY+  Y T+NPFDWM+LISLQGKTNFFEKRVGEYQKA
Sbjct:  188 MPGLTFSNELISRDEGLHCDFACLLYGLLKNKLSEERVRGIVSDAVEIEREFVCEAIPCALVGMNCDLMSQYIEFVADRLIGALGYDKIYDTQNPFDWMELISLQGKTNFFEKRVGEYQKA 308          
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Match: A0A5B6YP25_DAVIN (Putative ribonucleoside-diphosphate reductase small chain n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6YP25_DAVIN)

HSP 1 Score: 192 bits (488), Expect = 1.240e-59
Identity = 87/121 (71.90%), Postives = 100/121 (82.64%), Query Frame = 0
Query:    1 MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEKSFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMDLISLQGKTNFFEKRVGEYQKA 121
            MPGLTFSNE+ISRDEGLHCDFAC L+ LL  K S E V  I+  AVE+E+ F+C ALPC+L+GMN  +M+QYIEFVAD LLG+LGY   Y  +NPFDWM+LISLQGKTNFFEKRVGEYQKA
Sbjct:  102 MPGLTFSNELISRDEGLHCDFACLLYELLNQKLSEERVRGIVADAVEIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLGALGYGKMYNVQNPFDWMELISLQGKTNFFEKRVGEYQKA 222          
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Match: A4S0Z8_OSTLU (Uncharacterized protein n=3 Tax=Ostreococcus TaxID=70447 RepID=A4S0Z8_OSTLU)

HSP 1 Score: 194 bits (493), Expect = 2.620e-59
Identity = 88/122 (72.13%), Postives = 102/122 (83.61%), Query Frame = 0
Query:    1 MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEKSFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMDLISLQGKTNFFEKRVGEYQKAG 122
            MPGLTFSNE+ISRDEGLH DFAC LF +L NKPS E +  I+T+AVE+EK F+C +LPC+L+GMNA +M+ YIE+VADHL  SLG    Y T NPFDWM+LISLQGKTNFFEKRVGEYQKAG
Sbjct:  189 MPGLTFSNELISRDEGLHRDFACLLFSMLNNKPSEETIRKIVTEAVEIEKEFVCDSLPCALVGMNAGMMSDYIEYVADHLFCSLGLAKEYNTTNPFDWMELISLQGKTNFFEKRVGEYQKAG 310          
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Match: A0A835YXN6_9STRA (Ferritin-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXN6_9STRA)

HSP 1 Score: 195 bits (496), Expect = 3.240e-59
Identity = 92/122 (75.41%), Postives = 102/122 (83.61%), Query Frame = 0
Query:    1 MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEKSFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMDLISLQGKTNFFEKRVGEYQKAG 122
            MPGLTFSNE+ISRDEGLHCDFACEL+R+LE   SR  +L IIT+AV+VEK FIC ALP SLIGMNA  M  YIEFVAD +L SLGY+  Y  +NPFDWM+LISLQGKTNFFEKRV EYQKAG
Sbjct:  234 MPGLTFSNELISRDEGLHCDFACELYRMLERPLSRARILHIITEAVDVEKDFICDALPVSLIGMNAATMRTYIEFVADRMLQSLGYDKHYHARNPFDWMELISLQGKTNFFEKRVAEYQKAG 355          
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Match: RIR2C_ARATH (Ribonucleoside-diphosphate reductase small chain C n=33 Tax=Brassicaceae TaxID=3700 RepID=RIR2C_ARATH)

HSP 1 Score: 194 bits (492), Expect = 4.030e-59
Identity = 88/121 (72.73%), Postives = 102/121 (84.30%), Query Frame = 0
Query:    1 MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEKSFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMDLISLQGKTNFFEKRVGEYQKA 121
            MPGLTFSNE+ISRDEGLHCDFAC L+ LL+ K S E V SI+  AVE+E+ F+C ALPC+L+GMN  +M+QYIEFVAD LLG+LGY   YG  NPFDWM+LISLQGKTNFFEKRVG+YQKA
Sbjct:  189 MPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREFVCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFEKRVGDYQKA 309          
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Match: A0A438EBW0_VITVI (Ribonucleoside-diphosphate reductase small chain n=4 Tax=Vitis TaxID=3603 RepID=A0A438EBW0_VITVI)

HSP 1 Score: 192 bits (489), Expect = 4.290e-59
Identity = 86/121 (71.07%), Postives = 102/121 (84.30%), Query Frame = 0
Query:    1 MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEKSFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMDLISLQGKTNFFEKRVGEYQKA 121
            MPGLTFSNE+ISRDEGLHCDFAC L+ LL NK S E V +I+  +V++E+ F+C ALPC+L+GMN+ +M+QYIEFVAD LLG+LGY   Y   NPFDWM+LISLQGKTNFFEKRVGEYQKA
Sbjct:  156 MPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFVADRLLGALGYGKMYNVSNPFDWMELISLQGKTNFFEKRVGEYQKA 276          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig876.20121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G418_ECTSI7.950e-7086.89Ribonucleoside-diphosphate reductase small chain n... [more]
A0A2I0B0N4_9ASPA5.510e-6173.77Ribonucleoside-diphosphate reductase small chain n... [more]
A0A7S2CQR3_9STRA1.210e-6075.41Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835VDE6_VANPL3.220e-6071.90Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
A0A7J6X3S5_THATH1.010e-5971.90Ribonucleoside-diphosphate reductase small chain n... [more]
A0A5B6YP25_DAVIN1.240e-5971.90Putative ribonucleoside-diphosphate reductase smal... [more]
A4S0Z8_OSTLU2.620e-5972.13Uncharacterized protein n=3 Tax=Ostreococcus TaxID... [more]
A0A835YXN6_9STRA3.240e-5975.41Ferritin-like superfamily n=1 Tax=Tribonema minus ... [more]
RIR2C_ARATH4.030e-5972.73Ribonucleoside-diphosphate reductase small chain C... [more]
A0A438EBW0_VITVI4.290e-5971.07Ribonucleoside-diphosphate reductase small chain n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000358Ribonucleotide reductase small subunit familyPFAMPF00268Ribonuc_red_smcoord: 1..95
e-value: 1.9E-32
score: 112.8
IPR000358Ribonucleotide reductase small subunit familyPANTHERPTHR23409RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAINcoord: 1..121
IPR012348Ribonucleotide reductase-likeGENE3D1.10.620.20coord: 1..120
e-value: 2.0E-49
score: 170.3
NoneNo IPR availablePANTHERPTHR23409:SF35RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN Acoord: 1..121
IPR009078Ferritin-like superfamilySUPERFAMILY47240Ferritin-likecoord: 1..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig876contigF-serratus_M_contig876:224817..226032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig876.20121.1mRNA_F-serratus_M_contig876.20121.1Fucus serratus malemRNAF-serratus_M_contig876 224817..226051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig876.20121.1 ID=prot_F-serratus_M_contig876.20121.1|Name=mRNA_F-serratus_M_contig876.20121.1|organism=Fucus serratus male|type=polypeptide|length=122bp
MPGLTFSNEMISRDEGLHCDFACELFRLLENKPSRENVLSIITQAVEVEK
SFICGALPCSLIGMNATVMAQYIEFVADHLLGSLGYENAYGTKNPFDWMD
LISLQGKTNFFEKRVGEYQKAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000358RNR_small_fam
IPR012348RNR-like
IPR009078Ferritin-like_SF