prot_F-serratus_M_contig873.20100.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig873.20100.1
Unique Name	prot_F-serratus_M_contig873.20100.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	175

Homology

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BLAST of mRNA_F-serratus_M_contig873.20100.1 vs. uniprot
Match: A0A6H5L6X6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6X6_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 8.170e-55
Identity = 86/143 (60.14%), Postives = 101/143 (70.63%), Query Frame = 0

Query:   29 NLRNGAMVTAAYFALYYIFIIWQIVTKKRLHRMYKAQDKKFDRYATRDKKMLGWDRTVANMLEQMGPFVGLFWTNILLCPYGGLPLVYITGAGWQYVLLRALYPVLWFNGGGGPEGSSPGIMRSTLPMYTIVIGLLANAIFVI 171
            N+ +G  VT AY  LYY FI+ Q   K++L     A  KKFDRY +RD+KMLGWDRTV NMLEQMGPF+ LFW+NI L PYGGLP  YI   GW YVLLR+ YP+LWF GGGG EG+SP I R T+PMY I++    NA  VI
Sbjct:   29 NVVHGVRVTLAYLVLYYFFIVAQGSMKRKLRAYNAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPHAYIAALGWLYVLLRSFYPMLWFAGGGGSEGTSPTIWRVTMPMYVIILVFAVNAAIVI 171

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BLAST of mRNA_F-serratus_M_contig873.20100.1 vs. uniprot
Match: D7FJ57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ57_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 2.420e-52
Identity = 85/143 (59.44%), Postives = 100/143 (69.93%), Query Frame = 0

Query:   29 NLRNGAMVTAAYFALYYIFIIWQIVTKKRLHRMYKAQDKKFDRYATRDKKMLGWDRTVANMLEQMGPFVGLFWTNILLCPYGGLPLVYITGAGWQYVLLRALYPVLWFNGGGGPEGSSPGIMRSTLPMYTIVIGLLANAIFVI 171
            N+ +G  VT AY  LYY FII Q   K++L     A  KKFDRY +RD+KMLGWDRTV NMLEQMGPF+ LFW+NI L PYGGLP  YI   GW YVLLR+ YP+LWF GGGG  G+SP I R T+PMY I++    N+  VI
Sbjct:  101 NVVHGVRVTLAYLVLYYCFIIAQGSMKRKLRAYNAAHGKKFDRYFSRDRKMLGWDRTVGNMLEQMGPFLSLFWSNIWLSPYGGLPHAYIAALGWLYVLLRSFYPMLWFAGGGGSGGTSPTIWRVTMPMYVIILVFAVNSAIVI 243

[Close]

BLAST of mRNA_F-serratus_M_contig873.20100.1 vs. uniprot
Match: A0A7S4N4D2_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4N4D2_9EUKA)

HSP 1 Score: 50.8 bits (120), Expect = 2.980e-5
Identity = 35/96 (36.46%), Postives = 49/96 (51.04%), Query Frame = 0

Query:   83 DRTVANMLEQMGPFVGLFWTNILLC---------PYGGLPLVYITGAGWQYVLLRALYPVLWFNGGGGPEGSSPGIMRS-TLPMYTIVIGLLANAI 168
            DR VAN+LE +  F GLF TN+LL          P   LP  Y+  +GW YV+ R  Y V   +G    +G   G++   T+P Y  +I LL + +
Sbjct:    4 DRCVANLLEWLPFFFGLFLTNLLLILSSSLSSSSPLPPLPF-YMKASGWGYVVCRLGYVVTLSSGFFASDGDQKGLVLVWTIPAYVCIILLLYHIV 98

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig873.20100.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig873.20100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5L6X6_9PHAE	8.170e-55	60.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FJ57_ECTSI	2.420e-52	59.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S4N4D2_9EUKA	2.980e-5	36.46	Hypothetical protein n=1 Tax=Paramoeba aestuarina ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023352	Membrane associated eicosanoid/glutathione metabolism-like domain superfamily	GENE3D	1.20.120.550		coord: 29..173 e-value: 7.7E-12 score: 46.9
IPR023352	Membrane associated eicosanoid/glutathione metabolism-like domain superfamily	SUPERFAMILY	161084	MAPEG domain-like	coord: 36..167
IPR001129	Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein	PFAM	PF01124	MAPEG	coord: 38..159 e-value: 1.8E-6 score: 27.9
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 173..174
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..31
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 54..153
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 154..172
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..22
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 32..53
None	No IPR available	TMHMM	TMhelix		coord: 34..53
None	No IPR available	TMHMM	TMhelix		coord: 149..171
None	No IPR available	TMHMM	TMhelix		coord: 96..118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig873	contig	F-serratus_M_contig873:144368..146181 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig873.20100.1	mRNA_F-serratus_M_contig873.20100.1	Fucus serratus male	mRNA	F-serratus_M_contig873 142925..160667 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig873.20100.1 ID=prot_F-serratus_M_contig873.20100.1|Name=mRNA_F-serratus_M_contig873.20100.1|organism=Fucus serratus male|type=polypeptide|length=175bp
MFEKGEELAAAAVAAASGEAGSAPTLPANLRNGAMVTAAYFALYYIFIIW
QIVTKKRLHRMYKAQDKKFDRYATRDKKMLGWDRTVANMLEQMGPFVGLF
WTNILLCPYGGLPLVYITGAGWQYVLLRALYPVLWFNGGGGPEGSSPGIM
RSTLPMYTIVIGLLANAIFVISTV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023352	MAPEG-like_dom_sf
IPR001129	Membr-assoc_MAPEG