prot_F-serratus_M_contig873.20099.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig873.20099.1
Unique Nameprot_F-serratus_M_contig873.20099.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length542
Homology
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Match: A0A6H5K646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K646_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.640e-25
Identity = 109/353 (30.88%), Postives = 143/353 (40.51%), Query Frame = 0
Query:  164 TCSNGLSGFESSGGEVCCSVECGTCGGTGCSD----LTGGKDNCCVGTIYDNGGLCTTKGAAPCI--IYDEEASGTAXXXXXXXXXXXXXXSTPQPLSYFASYVSGTSYIGCFKEIA-SDPFSYRVEITGMTPELCYAECSTKDALYMGLMGSKECACGEDGDYVDSDKTSGTCDSVCDGE-DSICGGANSFGLYEFLSSSSDSGTYHKSDVDQDGEIDGYAYRGC-NDFDGEKPFNAVVGDDSMTPEMCYEICATVSARYFG--------VYAS-----------------------------------KNCGCGSDTYYIMFGGTSGTCDKSCAGDSNYSCGGTEAYDFYQ 464
            TC NGL+G     GE CC++ CGTCGG+GCS     LTG  D+CC   I  NG LC   GAAPCI  + D+  + T                                ++GCF + A S  F   +    MT E+C   C+   + Y G   S EC CG +G   D++   G CD  C G+    CGG  +  +YE              DVD  GE D  +Y GC +D    + F   +  DSMT E+C E CA   + Y+G        V+AS                                   K C CG++       G  G CD  C GD+  +CGG  A   Y+
Sbjct:   24 TCDNGLAGVSK--GEYCCTLGCGTCGGSGCSSRAEGLTG--DDCCTSNIASNGILCADSGAAPCIGDVGDDVPNETE------------------------------GFLGCFSDPADSRVFVQEISSASMTAEVCSEACA--GSAYYGTQYSTECWCGAEGADYDANGA-GVCDMPCGGDAGETCGGFYAMSIYEH-------------DVDG-GESDDPSYLGCYSDPADSRVFEQKISSDSMTAEVCSEACA--GSAYYGTQYSTEHTVHASHVSTKTPSVVHTPPTLPDIVPLLCGNATHYCFAFYKQCWCGAEGADYDANGA-GVCDMPCGGDAGETCGGFYAMSIYE 322          
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 2.060e-22
Identity = 67/171 (39.18%), Postives = 84/171 (49.12%), Query Frame = 0
Query:   62 TCVDGVSGIRSSDGSGDVCCNAKCPACGGEGCSYP-STTEIDANDCCISFIRSAGIYCDDTSEGPCIIGSSPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCSNGLSGFESSGGEVCCSVECGTCGGTGCS------DLTGGKDNCCVGTIYDNGGLCTTKGAAPCII 225
            T +DG  GI   DG+G VCC   C  CGG+GCS   S   + +  CC   ++S G+YCDDT+E PCIIGS+P T                             TCSNG+ G +  G EVCC + CG CGGTGC       +L G  ++CC   +      C    AAPCII
Sbjct:  572 TQIDGTEGI---DGNGVVCCPIGCGQCGGDGCSTAGSANGLGSESCCGGGVKSLGVYCDDTNEAPCIIGSAPDTDDVDSGISEESADDTQ-------------TCSNGIEGIDHKG-EVCCPLACGQCGGTGCGSAGSAFELDG--ESCCSSQVLAGNVYCEDTNAAPCII 723          
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Match: A0A6H5JU45_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU45_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 2.350e-21
Identity = 76/193 (39.38%), Postives = 101/193 (52.33%), Query Frame = 0
Query:  164 TCSNGLSGFESSGGEVCCSVECGTCGGTGCSDLTGGK--DNCCVGTIYDNGGLCTTKGAAPCI-IYDEEASGTAXXXXXXXXXXXXXXSTPQPLSYFASYVSGTSYIGCFKEI-ASDPFSYRVEITGMTPELCYAECSTKDALYMGLMGSKECACGEDGDYVDSDKTSGTCDSVCDGE-DSICGGANSFGLYE 351
            TC NGL+G  +  G  CC++ CGTCGG+GCS    G   D+CC   I  NG LC   GAAPCI   D++ S            XXXXX    P+        G+SY+GCF ++  S  F++      MT + C A C+  D+ Y G   S+EC CG +G   D++   G CD  C G+ D ICGG  +  +YE
Sbjct:   24 TCDNGLAGVST--GVYCCTLGCGTCGGSGCSSRAEGLNGDDCCTSNIASNGILCADSGAAPCIGDVDDDVS-----------TXXXXXXXXXPV--------GSSYLGCFSDLPGSRIFTFEAATYTMTADACLALCA--DSAYYGTQYSEECWCGAEGADYDANGA-GVCDMPCGGDADEICGGFYAISVYE 192          
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Match: A0A6H5JGP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP9_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 9.370e-21
Identity = 59/167 (35.33%), Postives = 77/167 (46.11%), Query Frame = 0
Query:   63 CVDGVSGIRSSDGSGDVCCNAKCPACGGEGCS-YPSTTEIDANDCCISFIRSAGIYCDDTSEGPCIIGSSPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCSNGLSGFESSGGEVCCSVECGTCGGTGCSDLTG----GKDNCCVGTIYDNGGLCTTKGAAPCI 224
            C DG+ GI   DG+G VCC  +C  C G GC+ + +   + +  CC   ++ AG YCD T E PCI GS P                                CS G+ G + +G  VCC +ECG CGGTGCS        G ++CC   +  +G  C   G APCI
Sbjct:   48 CNDGIEGI---DGNGVVCCPLECGQCAGTGCTNFGADFGLGSESCCGGGVKDAGNYCDVTGEAPCIYGSPPEGE-----------------------------CSGGIEGIDGNG-VVCCPLECGQCGGTGCSSAGAASGLGSESCCESGVDSSGRYCDVTGEAPCI 181          
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Match: D7G8L8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L8_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.460e-20
Identity = 60/168 (35.71%), Postives = 77/168 (45.83%), Query Frame = 0
Query:   62 TCVDGVSGIRSSDGSGDVCCNAKCPACGGEGCSYPSTT-EIDANDCCISFIRSAGIYCDDTSEGPCIIGSSPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCSNGLSGFESSGGEVCCSVECGTCGGTGCS----DLTGGKDNCCVGTIYDNGGLCTTKGAAPCI 224
            TC DG+ GI   DG+G VCC   C  CGGEGC+       + +  CC   ++SA  YCD T + PCI GS P                                C+NG+ G + +G  VCC ++CG CGG GCS    D   G ++CC G +      C   G APCI
Sbjct:   23 TCNDGIEGI---DGNGVVCCPRHCGQCGGEGCTGSGADFGLGSESCCGGGVKSANNYCDVTGKAPCIYGSPPEGE-----------------------------CNNGIEGIDGNG-VVCCPLDCGQCGGEGCSGSGADFGLGSESCCGGGVKSANNYCDVTGKAPCI 157          
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Match: D7G3U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U7_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 9.010e-20
Identity = 66/162 (40.74%), Postives = 90/162 (55.56%), Query Frame = 0
Query:   63 CVDGVSGIRSSDGSGDVCCNAKCPACGGEGCSYPSTTEIDANDCCISFIRSAGIYCDDTSEGPCIIGSSPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCSNGLSGFESSGGEVCCSVECGTCGGTGCSDLTGGKDNCCVGTIYDNGGLCTTKGAAPCI 224
            C  G+ GI++SD    VCC+A C +CGG GCS   + +  +  CC   +R++G YC  T E PC+ G++P+  XXXXXXXXX                    C  G+ G ++S  +VCCS  CG+CGGTGCS   GG   CC G +  +G  C+  G APC+
Sbjct:  189 CDGGIVGIQTSD----VCCSASCGSCGGTGCS---SRDGGSGACCGGGVRASGRYCSVTGEAPCMTGAAPTPEXXXXXXXXXTVEVPM--------------CDGGIVGIQTS--DVCCSTSCGSCGGTGCSGRDGGSGACCGGGVRASGRYCSVTGEAPCM 327          
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Match: A0A6H5JVC9_9PHAE (AMOP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC9_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.520e-19
Identity = 69/163 (42.33%), Postives = 91/163 (55.83%), Query Frame = 0
Query:   63 CVDGVSGIRSSDGSGDVCCNAKCPACGGEGCSYPSTTEIDANDCCISFIRSAGIYCDDTSEGPCIIGSSPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCSNGLSGFESSGGEVCCSVECGTCGGTGCSDLTGGKDNCCVGTIYDNGGLCTTKGAAPCII 225
            C  G+ GI+SSD    VCC + C +CGG GC+     E DA  CC   +R++G YC  T E PC+ G +P+  XXXXXXXXX                    C  G+ G +SS  +VCCS+ CG+CGGTGC+   GG D CC G +  +G  C+  G APC++
Sbjct:  136 CDGGIVGIQSSD----VCCTSSCGSCGGSGCTGRDGGE-DA--CCGGGVRASGRYCSVTGEAPCMTGPAPTPXXXXXXXXXXTEEVPM--------------CDGGIVGIQSS--DVCCSLSCGSCGGTGCTVRDGGADACCGGGVRASGRDCSVTGEAPCVV 275          
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Match: A0A6H5JWJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ0_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.870e-19
Identity = 65/163 (39.88%), Postives = 90/163 (55.21%), Query Frame = 0
Query:   63 CVDGVSGIRSSDGSGDVCCNAKCPACGGEGCSYPSTTEIDANDCCISFIRSAGIYCDDTSEGPCIIGSSPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCSNGLSGFESSGGEVCCSVECGTCGGTGCSDLTGGKDNCCVGTIYDNGGLCTTKGAAPCII 225
            C  G+ GI++SD    VCC+A C +C G GCS     +   + CC   +R++G +C  T E PCI G +P+  XXXXXXXXX                    C  G+ G ++S  +VCCS+ CG+CGG+GCS   GG D CC G +  +G  C+  G APC++
Sbjct:  397 CDGGIIGIQTSD----VCCSASCGSCXGSGCSG---RDGGPDACCGGGVRASGRFCSVTGEAPCITGPAPTPXXXXXXXXXXTIEVPE--------------CDGGIVGIQAS--DVCCSLSCGSCGGSGCSGRDGGSDACCGGGVRASGRFCSVTGEAPCLV 536          
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Match: A0A6H5JTV1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV1_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 4.470e-19
Identity = 63/163 (38.65%), Postives = 92/163 (56.44%), Query Frame = 0
Query:   63 CVDGVSGIRSSDGSGDVCCNAKCPACGGEGCSYPSTTEIDANDCCISFIRSAGIYCDDTSEGPCIIGSSPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCSNGLSGFESSGGEVCCSVECGTCGGTGCSDLTGGKDNCCVGTIYDNGGLCTTKGAAPCII 225
            C   + GI+SSD    VCC+A C  CGG GC+     +  +  CC   +R++G YC  T E PC+ G++P+ +XXXXXXXXX                    C  G+ G ++S  +VCCS+ CG+CGG+GC+   GG ++CC G +  +G  C+  G APC++
Sbjct:  226 CDGDIVGIQSSD----VCCSASCGTCGGSGCTG---RDGGSESCCGGGVRASGRYCSITGEAPCMTGAAPTPAXXXXXXXXXTVEVPK--------------CDGGIVGIQAS--DVCCSLSCGSCGGSGCTGRDGGSESCCGGGVRASGRDCSVTGEAPCVV 365          
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 4.780e-19
Identity = 61/169 (36.09%), Postives = 77/169 (45.56%), Query Frame = 0
Query:   62 TCVDGVSGIRSSDGSGDVCCNAKCPACGGEGCSYP-STTEIDANDCCISFIRSAGIYCDDTSEGPCIIGSSPSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCSNGLSGFESSGGEVCCSVECGTCGGTGCSDLTG----GKDNCCVGTIYDNGGLCTTKGAAPCII 225
            TC DG  GI   DG+G VCC   C  C G+GC    S   + +  CC + ++S G+YCDDT+E PCIIGS P T                             TCS+G  G + +G  VCC + CG C G GC         G ++CC   +   G  C     APCII
Sbjct:  420 TCSDGTEGI---DGNGVVCCPIGCGQCAGDGCGTAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCIIGSRPDTDDVDSESADETQ-----------------TCSDGTEGIDGNG-VVCCPIGCGQCAGDGCGTAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCII 567          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig873.20099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5K646_9PHAE2.640e-2530.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUS5_9PHAE2.060e-2239.18MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5JU45_9PHAE2.350e-2139.38WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JGP9_9PHAE9.370e-2135.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8L8_ECTSI1.460e-2035.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3U7_ECTSI9.010e-2040.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVC9_9PHAE1.520e-1942.33AMOP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JWJ0_9PHAE2.870e-1939.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTV1_9PHAE4.470e-1938.65Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G651_ECTSI4.780e-1936.09Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 375..466
e-value: 0.0066
score: 14.4
coord: 263..353
e-value: 3.5E-4
score: 28.0
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 378..456
e-value: 2.7E-8
score: 33.9
coord: 266..343
e-value: 9.4E-11
score: 41.8
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 375..466
score: 8.726
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 263..353
score: 9.264
NoneNo IPR availablePANTHERPTHR43662FAMILY NOT NAMEDcoord: 138..364
NoneNo IPR availablePANTHERPTHR43662:SF3coord: 394..467
NoneNo IPR availablePANTHERPTHR43662:SF3coord: 138..364
NoneNo IPR availablePANTHERPTHR43662FAMILY NOT NAMEDcoord: 394..467
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..541
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.671
NoneNo IPR availableTMHMMTMhelixcoord: 13..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig873contigF-serratus_M_contig873:10749..33203 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig873.20099.1mRNA_F-serratus_M_contig873.20099.1Fucus serratus malemRNAF-serratus_M_contig873 6676..34344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig873.20099.1 ID=prot_F-serratus_M_contig873.20099.1|Name=mRNA_F-serratus_M_contig873.20099.1|organism=Fucus serratus male|type=polypeptide|length=542bp
MEPGNVLSRSRHGALFWVMVLIVGGAVSGEGAKPSSNTLRGVNLHYEAAA
PAFHGGRALGATCVDGVSGIRSSDGSGDVCCNAKCPACGGEGCSYPSTTE
IDANDCCISFIRSAGIYCDDTSEGPCIIGSSPSTSTTSPSTSTTTTTTTS
STSAPASTTTSSSTCSNGLSGFESSGGEVCCSVECGTCGGTGCSDLTGGK
DNCCVGTIYDNGGLCTTKGAAPCIIYDEEASGTATGTATVSVTPTMTPST
PQPLSYFASYVSGTSYIGCFKEIASDPFSYRVEITGMTPELCYAECSTKD
ALYMGLMGSKECACGEDGDYVDSDKTSGTCDSVCDGEDSICGGANSFGLY
EFLSSSSDSGTYHKSDVDQDGEIDGYAYRGCNDFDGEKPFNAVVGDDSMT
PEMCYEICATVSARYFGVYASKNCGCGSDTYYIMFGGTSGTCDKSCAGDS
NYSCGGTEAYDFYQLVDNNIGLDDDSPEGGLLECSNGFAGVESADGSVCC
AAACGSCDGSRCVGTGGCCAEYIKAKYDSCSEEGCAPCVMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd