prot_F-serratus_M_contig87.20065.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig87.20065.1
Unique Nameprot_F-serratus_M_contig87.20065.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length162
Homology
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A1B6ENF5_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6ENF5_9HEMI)

HSP 1 Score: 130 bits (326), Expect = 1.660e-35
Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 0
Query:   10 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRKH 162
            W + D P GK  +  K V+K K   DG VE+YK R V KG+ Q KG  Y E+ SP     +IR  L++ A      +Q DV  AFL  ++ EE+Y++ P+GY D   +V RL K+ YGL  A   W+KKFG  L+  GFK+S ADPC+F +K+
Sbjct:    4 WILADLPPGKKAIPCKWVYKVKTNPDGTVERYKARLVIKGYSQRKGTDYGETFSPVAKAGTIRALLSIAANEKMILKQFDVSTAFLYGELEEEIYMQQPEGYSDGSGKVCRLIKSFYGLKQAPRCWNKKFGSFLVNLGFKKSDADPCLFIKKN 156          
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: UPI000D464853 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI000D464853)

HSP 1 Score: 129 bits (324), Expect = 8.700e-34
Identity = 65/159 (40.88%), Postives = 101/159 (63.52%), Query Frame = 0
Query:    1 MDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP-NQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVF 158
            +D      VW +VD P+G   +G K VFK+K+G DG+VE YK R VAKGFRQ +GI Y+E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   + E +++E P G+     ++V +L++++YGL  A   W+ +F   + + GF +++ +PCV+
Sbjct:   83 IDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGYIEENIFMEQPRGFESQDGSKVCKLKRSIYGLKQASRSWNIRFDEAIKSFGFIKNEDEPCVY 241          
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A8J6LQ49_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LQ49_TENMO)

HSP 1 Score: 134 bits (336), Expect = 1.290e-33
Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = 0
Query:   10 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 161
            W++VD P+GK  +  K V+K K   DG ++K+K R V KG+ Q +GI Y E+ SP   +S+IR  L+V A    +  Q+DV  AFL  D+ E +Y++ P+G+ D   +V RL+K++YGL  A   W++KF   +I  GF+RS+ADPC+F R+
Sbjct:   90 WELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQ 241          
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A8J6HDY0_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HDY0_TENMO)

HSP 1 Score: 134 bits (337), Expect = 2.110e-33
Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = 0
Query:   10 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 161
            W++VD P+GK  +  K V+K K   DG ++K+K R V KG+ Q +GI Y E+ SP   +S+IR  L+V A    +  Q+DV  AFL  D+ E +Y++ P+G+ D   +V RL+K++YGL  A   W++KF   +I  GF+RS+ADPC+F R+
Sbjct:  525 WELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPEARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHGDGSGRVCRLKKSLYGLKQAPCCWNEKFSNYIIKLGFRRSEADPCLFVRQ 676          
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A2R6QI23_ACTCC (Endonuclease (Fragment) n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QI23_ACTCC)

HSP 1 Score: 132 bits (332), Expect = 2.650e-33
Identity = 69/152 (45.39%), Postives = 93/152 (61.18%), Query Frame = 0
Query:   10 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 161
            W +VD P GK+++G + V+K K   DG VE+YK R VAKGF Q  GI Y+E+ +P    +S+R  LAV A   W   Q+DV+ AFL  D+TEE+Y++LP G   S NQV RL++A+YGL  A   W  KF   +   GF  S  D  +F R+
Sbjct:  345 WDLVDLPPGKSIIGCRWVYKIKTRADGTVERYKARLVAKGFTQEYGIDYEETFAPVARLTSVRSLLAVAATRGWSLCQMDVKNAFLNGDLTEEVYMQLPPGSSSSSNQVCRLRRALYGLKQAPRAWYAKFSSTICDLGFSASAYDSALFTRQ 496          
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A8J6HGL1_TENMO (Integrase catalytic domain-containing protein n=2 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HGL1_TENMO)

HSP 1 Score: 134 bits (336), Expect = 2.970e-33
Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = 0
Query:   10 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 161
            W++VD P+GK  +  K V+K K   DG ++K+K R V KG+ Q +GI Y E+ SP   +S+IR  L+V A    +  Q+DV  AFL  D+ E +Y++ P+G+ D   +V RL+K++YGL  A   W++KF   +I  GF+RS+ADPC+F R+
Sbjct: 1168 WELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQ 1319          
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A8J6L9T5_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9T5_TENMO)

HSP 1 Score: 134 bits (336), Expect = 3.010e-33
Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = 0
Query:   10 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 161
            W++VD P+GK  +  K V+K K   DG ++K+K R V KG+ Q +GI Y E+ SP   +S+IR  L+V A    +  Q+DV  AFL  D+ E +Y++ P+G+ D   +V RL+K++YGL  A   W++KF   +I  GF+RS+ADPC+F R+
Sbjct:  842 WELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQ 993          
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A8J6HMR3_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HMR3_TENMO)

HSP 1 Score: 133 bits (334), Expect = 5.290e-33
Identity = 65/152 (42.76%), Postives = 97/152 (63.82%), Query Frame = 0
Query:   10 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 161
            W++VD P GK  +  K V+K K   DG ++K+K R V KG+ Q +GI Y E+ SP   +S+IR  L+V A    +  Q+DV  AFL  D+ E +Y++ P+G+ D   +V RL+K++YGL  A   W++KF   +I  GF+RS+ADPC+F R+
Sbjct:  558 WELVDLPHGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQ 709          
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 133 bits (334), Expect = 5.470e-33
Identity = 64/155 (41.29%), Postives = 99/155 (63.87%), Query Frame = 0
Query:    8 GVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVF-WRK 161
            G W++ D PK +  +G K VF+RK  ++G+V KYK R VA+G+ QI G+ + E+ +P     SIR  LA+    +WE  Q+DV+ A+L  D+ EE+Y+  P+G+ D   ++ RL+K +YGL  +G  W++K   EL   G+KR +ADPCV+ W +
Sbjct:  937 GTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWER 1091          
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A2I0IJP3_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IJP3_PUNGR)

HSP 1 Score: 129 bits (325), Expect = 6.500e-33
Identity = 62/159 (38.99%), Postives = 101/159 (63.52%), Query Frame = 0
Query:    1 MDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP-NQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVF 158
            MD      VW +VD P+G   +G K VFKRK+G DG+VE YK R VAKG+RQ +G+ Y+E+ SP     S+R+ LA+ A  D+E  Q+DV+ AFL   + E+++++ P G+     ++V +L++++YGL      W+++F   + + GF + + +PCV+
Sbjct:   99 MDSMSKNQVWDLVDPPEGIVPIGNKWVFKRKIGADGKVETYKARLVAKGYRQKQGVDYEETFSPVAMLKSLRIMLAIAAHYDYEVWQMDVKTAFLNVSIEEDIFMDQPKGFESKDKSKVCKLKRSIYGLTQVSRSWNRRFDEAVKSFGFIKYEDEPCVY 257          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1B6ENF5_9HEMI1.660e-3543.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000D4648538.700e-3440.88hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
A0A8J6LQ49_TENMO1.290e-3342.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8J6HDY0_TENMO2.110e-3342.76Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A2R6QI23_ACTCC2.650e-3345.39Endonuclease (Fragment) n=1 Tax=Actinidia chinensi... [more]
A0A8J6HGL1_TENMO2.970e-3342.76Integrase catalytic domain-containing protein n=2 ... [more]
A0A8J6L9T5_TENMO3.010e-3342.76Uncharacterized protein n=1 Tax=Tenebrio molitor T... [more]
A0A8J6HMR3_TENMO5.290e-3342.76Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GYH9_9APHY5.470e-3341.29Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A2I0IJP3_PUNGR6.500e-3338.99Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..161
e-value: 1.4E-38
score: 132.9
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 10..154
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 10..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig87contigF-serratus_M_contig87:498657..499142 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig87.20065.1mRNA_F-serratus_M_contig87.20065.1Fucus serratus malemRNAF-serratus_M_contig87 498657..499142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig87.20065.1 ID=prot_F-serratus_M_contig87.20065.1|Name=mRNA_F-serratus_M_contig87.20065.1|organism=Fucus serratus male|type=polypeptide|length=162bp
MDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGF
RQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVT
EELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKR
SQADPCVFWRKH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like