prot_F-serratus_M_contig87.20059.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig87.20059.1
Unique Nameprot_F-serratus_M_contig87.20059.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length258
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig87.20059.1 vs. uniprot
Match: D8LKJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ4_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 6.150e-59
Identity = 130/243 (53.50%), Postives = 151/243 (62.14%), Query Frame = 0 
Query:   34 IDACLRRWKAARHDGQAVLARLSNALLLRTYVDEARGASVSGDISDGISGGGAHVWGALASAGTSVSRVALATEARVRRLHGDLSALQDAMVAAAAGVRRHAQEARLQCKRFSAGEDAALDVCAAPSSTAAGGKRGIKAASTTGFTIL-----------------------VGGGYAMEDVANAASEVSEMLLQEALVTATVARGVGE--CQDDRNALTVYAAAWMMQPYLDARRLRELEVMV 251
            ID CLRRWKAARH+GQAVL  LSNALLLRTYVD  +G            G    VWGALA AGT+VSRV++ATE R RRLHGDLSALQDAMVAAA  +RRHA+E R +     AG +             +G   G KA                                VGGGYA+ DVA+  S+V+EML++EALVTATV +GVG+   +DDR ALTVYAAAWMMQPY+DA RL+ELEVMV
Sbjct:   30 IDGCLRRWKAARHEGQAVLTDLSNALLLRTYVD--KGXXXXXXXRAATDGA---VWGALAGAGTTVSRVSVATEHRARRLHGDLSALQDAMVAAAGELRRHAREVRRRWVSARAGGE---------DHRTSGSSSGAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGGGYALVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMV 258
[Close]
BLAST of mRNA_F-serratus_M_contig87.20059.1 vs. uniprot
Match: A0A835ZE08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE08_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 9.050e-6
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0 
Query:  184 GGYAMEDVANAASEVSEMLLQEALVTATVARGVGECQDDRNALTVYAAAWMMQPYLDARRLRELEVMVEA 253
            GGY+  D+A AA  +  ML +E  V   V    G+C   R+ LT+YAAAWMMQPY++    ++L  M E 
Sbjct:  116 GGYSAADIAQAALALGRMLEREVAVAEAVCADAGDCSS-RDTLTLYAAAWMMQPYMERGLWKDLLRMTET 184
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig87.20059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKJ4_ECTSI6.150e-5953.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZE08_9STRA9.050e-642.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig87contigF-serratus_M_contig87:232657..233430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig87.20059.1mRNA_F-serratus_M_contig87.20059.1Fucus serratus malemRNAF-serratus_M_contig87 232337..233514 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig87.20059.1 ID=prot_F-serratus_M_contig87.20059.1|Name=mRNA_F-serratus_M_contig87.20059.1|organism=Fucus serratus male|type=polypeptide|length=258bp
MSSLREATDRSADHSGQTAEGDTNDVVGDILAGIDACLRRWKAARHDGQA
VLARLSNALLLRTYVDEARGASVSGDISDGISGGGAHVWGALASAGTSVS
RVALATEARVRRLHGDLSALQDAMVAAAAGVRRHAQEARLQCKRFSAGED
AALDVCAAPSSTAAGGKRGIKAASTTGFTILVGGGYAMEDVANAASEVSE
MLLQEALVTATVARGVGECQDDRNALTVYAAAWMMQPYLDARRLRELEVM
VEARRRN*
back to top