prot_F-serratus_M_contig87.20056.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig87.20056.1
Unique Nameprot_F-serratus_M_contig87.20056.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length338
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig87.20056.1 vs. uniprot
Match: D8LKH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH2_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 1.320e-87
Identity = 159/222 (71.62%), Postives = 177/222 (79.73%), Query Frame = 0 
Query:    1 MSWSEATDDRDTLSELRTLP-----SRPPG----SSSRGRSSKLSARAMGGSKSERRLLMEAKATISAAIAEERRERALAKRRARKCVSFLYYSFKVVGVVACVYTSGLNVALVYMRLDLKLQDRVVRCYLVLFGVGGVLAELDTPFAKANFRAMQKWWFKAPFYVFMAWLCLDARHARGTMWFPLEMASFVALQSMAAMAIVLNVCLRQVLERSGALGKRR 213
            MSW+E  D  DTLSEL          RPP     +SS GRS+K    + G SKSERRLLMEAKA + AAIAE+R+ER +AKRRAR+ V  LYY+ KVVGV ACVYTSGLN  LVYMR D  LQDR+VR YLVLFGVGGVLAELDTPFAKANFRA+QKWWFKAPFYVFMAWLC DA  +RGT+WFPLE+ASFVALQ+M AMA+VLNVCLR+VLERSGA GKRR
Sbjct:    1 MSWAEPAD-MDTLSELPRQSMVGSSGRPPKLSRTTSSVGRSAKSRGGSGGASKSERRLLMEAKAGVGAAIAEDRQERLIAKRRARRIVRVLYYAMKVVGVAACVYTSGLNATLVYMRPDFGLQDRLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFPLELASFVALQTMGAMAVVLNVCLREVLERSGAFGKRR 221
[Close]
BLAST of mRNA_F-serratus_M_contig87.20056.1 vs. uniprot
Match: A0A6H5JH79_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH79_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 7.560e-67
Identity = 114/154 (74.03%), Postives = 127/154 (82.47%), Query Frame = 0 
Query:   64 ERRERALAKRRARKCVSFLYYSFKVVGVVACVYTSGLNVALVYMRLD----LKLQDRVVRCYLVLFGVGGVLAELDTPFAKANFRAMQKWWFKAPFYVFMAWLCLDARHARGTMWFPLEMASFVALQSMAAMAIVLNVCLRQVLERSGALGKRR 213
            +R+ER  AKRRAR+ V  LYY+ KVVGV AC YTSGLN  LVYMR D    L     +VR YLVLFGVGGVLAELDTPFAKANFRA+QKWWFKAPFYVFMAWLC DA  +RGT+WF LE+ASFVALQ++  MA+VLNVCLR+VLERSGALGKRR
Sbjct:    8 DRQERLAAKRRARRIVRVLYYAMKVVGVGACFYTSGLNATLVYMRPDFGRELLASSLLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFSLELASFVALQTVGVMALVLNVCLREVLERSGALGKRR 161
[Close]
BLAST of mRNA_F-serratus_M_contig87.20056.1 vs. uniprot
Match: A0A835YSD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.870e-18
Identity = 65/162 (40.12%), Postives = 96/162 (59.26%), Query Frame = 0 
Query:   57 ISAAIAEERRERALAKRRARKCVSFLYYSFKVVGVVACVYTSGLNVALVYMRLDLKLQDRVVRCYLVLFGVGGVLAELDTPFAKANFRAMQKWWFKAPFYVFMAWLCLD--ARHARGTMWFPLEMASFVALQSMAAMAIVLNVCLRQVLERSGALGKRRKSR 216
            +  A+ E  RE A+A+RRAR CV++ Y+  K   V   V     NV ++  R +  L++R VR YL+ F +  +LAELDT FA+ NFRA+QKWW KA FYVF+  + L      A G     L++A+   L ++A   + L  CLR++LE++  L K RK++
Sbjct:   70 VRKAMEEVAREAAIARRRARACVTYSYWVLKSTAVATHVLMITTNVWVLARRHEPDLRERAVRGYLIPFSLAALLAELDTRFARDNFRALQKWWCKALFYVFLGTVNLGWTPLGALGRPLTRLQLATAGVLCALALGNVALYTCLRRLLEKT-VLRKLRKAK 230
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig87.20056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKH2_ECTSI1.320e-8771.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH79_9PHAE7.560e-6774.03Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YSD9_9STRA2.870e-1840.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..203
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 138..148
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 168..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 204..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..104
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig87contigF-serratus_M_contig87:99587..115977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig87.20056.1mRNA_F-serratus_M_contig87.20056.1Fucus serratus malemRNAF-serratus_M_contig87 99587..116206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig87.20056.1 ID=prot_F-serratus_M_contig87.20056.1|Name=mRNA_F-serratus_M_contig87.20056.1|organism=Fucus serratus male|type=polypeptide|length=338bp
MSWSEATDDRDTLSELRTLPSRPPGSSSRGRSSKLSARAMGGSKSERRLL
MEAKATISAAIAEERRERALAKRRARKCVSFLYYSFKVVGVVACVYTSGL
NVALVYMRLDLKLQDRVVRCYLVLFGVGGVLAELDTPFAKANFRAMQKWW
FKAPFYVFMAWLCLDARHARGTMWFPLEMASFVALQSMAAMAIVLNVCLR
QVLERSGALGKRRKSRQRGGSVSQATSRRGTGGGTRSRGPGGSRVASSAS
GGLGVSSFRERDRRRPQPPPSPGVASTTGSVQSVGSGAGFGEKYSPEMVP
EKSSRLISPRERSSSYGGGGGGGKHEYEYEYYGSTGNG
back to top