prot_F-serratus_M_contig87.20055.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig87.20055.1
Unique Nameprot_F-serratus_M_contig87.20055.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length440
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig87.20055.1 vs. uniprot
Match: D8LKH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH3_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 7.100e-25
Identity = 66/134 (49.25%), Postives = 80/134 (59.70%), Query Frame = 0 
Query:  281 MDHLEAYRYIVGKGKFESRKRLLAWKENALTKSTGSLQIADIITRHRGASPGQNSGLPPASIRSPESGRGASRRTWLRKAGPTESTAAAIRDDPFQSGGTNSDKLGRERARRQDLLLHAKTRDDIFDRRKGCVP 414
            M+H EAYRY  GKG FE+ KR L  KE+AL K TGS  +AD I R R +S G+    PP S  S       +RR   R+    +     I  DPFQ GG NS+KL RE  RRQDLL+HAK R+++F RRKG  P
Sbjct:    1 MNHQEAYRYTAGKGNFEAEKRTLLEKEDALRKGTGSFLMADTIQRFRSSSEGR----PPTSDLS-------ARRGSQRRRAAAKRAMVPIESDPFQCGGYNSEKLKREETRRQDLLVHAKGRNNMFCRRKGYEP 123
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig87.20055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKH3_ECTSI7.100e-2549.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig87contigF-serratus_M_contig87:52148..62786 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig87.20055.1mRNA_F-serratus_M_contig87.20055.1Fucus serratus malemRNAF-serratus_M_contig87 51836..63611 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig87.20055.1 ID=prot_F-serratus_M_contig87.20055.1|Name=mRNA_F-serratus_M_contig87.20055.1|organism=Fucus serratus male|type=polypeptide|length=440bp
MSMSASRNRDLAQAEVSISGLGEVERTVISTLGSLRGAPEPCPTNTPKPA
RKVCRIFSPVASRSEHFSGGRVPRISNANCQQNALRPLTTDAALHCRPRS
TEKILRNGVDNSSVENHGGESKHVYPRPQADRRPIASDSFNDPSGRNSCR
LDFDTRVDLRPSTTGKPKESPRQHHCVQHDHPANREIMSATRNAVRGDTR
SPAKEAPKKNRSCRRDSRRRSNASSSGSSRRSSPWRDHGKGDDLQPNHFW
PTVGGPKAFLHPFIQRNQRHLWVYDPALAGMDHLEAYRYIVGKGKFESRK
RLLAWKENALTKSTGSLQIADIITRHRGASPGQNSGLPPASIRSPESGRG
ASRRTWLRKAGPTESTAAAIRDDPFQSGGTNSDKLGRERARRQDLLLHAK
TRDDIFDRRKGCVPPAKTKTTGWLPQATNCRLSVSAPCA*
back to top