prot_F-serratus_M_contig862.20006.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig862.20006.1
Unique Nameprot_F-serratus_M_contig862.20006.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length476
Homology
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 541 bits (1393), Expect = 5.530e-187
Identity = 278/455 (61.10%), Postives = 332/455 (72.97%), Query Frame = 0
Query:   29 EDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAP-EASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFEDADSDLCYKNIAS--------STFESIDGTIPSL 474
            E  GC T+TDLY  R+E DG + KGPI+ LDD+ + + +P  ++ KWLLT++L +  G+VFYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE T+VTSWDTPNK+PQ  Y GGRSF+NCVSE  + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++  SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT                               +GG  AAGIFLHRSSD   V+DN VHDMQDAGMA+LES +ADI++N F++VK+GIR+SLG   N+V++N+F+  ST GLYTYQGSD P +  SDGRPSDN F +N I N   GVKIKEGD+T+IT N FTGTS LEF DA++T W  NT       +C KNI S        STF+     +P+L
Sbjct:   83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHSDDGIDIELSTFDRRTAGLPTL 521          
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 530 bits (1364), Expect = 1.280e-177
Identity = 258/439 (58.77%), Postives = 311/439 (70.84%), Query Frame = 0
Query:   11 KASIRWASGTGINGRMYLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFED 449
            + S R+A+ +G+ GR+Y E  GC TMTDLY  R  ++  + KGP+Y+LDD+   +  P+ +T  WLL ++L++  G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YE GRSF+NCVSE  + + CEG  KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA                             +GG+ AAGIFLHRSSD   V+DN + +MQDAG+A+LESFDA I+ N     KYGIR+SLG GNN VY N F   S YGLYTY+GSD P+ S DGRPS N    N + +   GVKIKEGD+     NTF      EF ++ +T+W+ N   D
Sbjct:  427 RPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGD 864          
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 505 bits (1300), Expect = 9.380e-174
Identity = 259/462 (56.06%), Postives = 316/462 (68.40%), Query Frame = 0
Query:   29 EDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFEDADSDLCYKNIAS--------STFESIDGTIPS 473
            E  GC T+TDLY  R  ++  + KGP+Y+LD +   + +PTSVT KWLL ++L+V  G++FYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF  T+VTSWDTPNK PQE YEGGRSF+NCVSE  + ETC+G  KND GECRMDII+SEMGY+G+FDSESYGLTWKVR         GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY            +A                             +GG  A GIFLHRSSD+ EVY N + +M DAG+A+LESF+ADIHDN    V++GIR+SLG G N+VYDN F+ CS +GLYTY GSD P+ S+ GRP+ N+F +N ++N+  GVK K  DN ++T N FTGT  LEF DA+ T W+ N+     S +C  NI S        STF S  G +PS
Sbjct:   18 ESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLP---SGVCIDNITSDDGNSVPPSTFSSSSG-VPS 462          
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 1.260e-164
Identity = 246/449 (54.79%), Postives = 304/449 (67.71%), Query Frame = 0
Query:   29 EDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEY-ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFEDADSDLCYKNIAS-STFESIDGTIPSLC 475
            + GGC T++DLY  +   +    KGP+++LD ND +  + T+ TGKWLLT+ LFV  G+  YCRG  +GG+C ELRI+ST  +DF E+RGHGG+LYFE T+VTSWD   + PQE Y+ GRSFI CVSE    ++TC     N+ GECRMDIIDSEMGYLG+  SE+YG+TWKVRGFC+D SNP+VFD  NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA                             +GG+ AAGIFLHRS D  EVY N + +M DAG+A+LE+   DIHDN     ++GIR+ LG  NN V+DNVF      G++TY GSD P     GRP DN FY+NTI  TETGVKIKE DN  IT N F+GT+ +EFN+A D VW+ N+     ++ C ++I + STF    G +P  C
Sbjct:    7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIP---TNTCLEDIDNNSTFTGSSG-LPLEC 447          
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 436 bits (1120), Expect = 4.040e-148
Identity = 214/347 (61.67%), Postives = 250/347 (72.05%), Query Frame = 0
Query:   36 MTDLYQSR-VEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCS 373
            MTDLY  R  EKDG + KGP+Y+LDD+   +  P+ +T  WLL ++L++  G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YEGGRSF+NCVSE  + + CEG  KN+ GECRMDII+SE+ YLG+FDSESYG+TWK        VRGFC D SNPEVFD TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT                               +GG+ A GIFLHRSSD   V+DN + +MQDAG+A+LE+FDA I+ N+    KYGIR+SLG GNN VY N F   S
Sbjct:    1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDIS 334          
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 1.230e-142
Identity = 239/425 (56.24%), Postives = 281/425 (66.12%), Query Frame = 0
Query:   57 ILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFEDADSDLCYKNIAS--------STFESIDGTIPS 473
            +LDD+ + + SPTSVT KWLL S+L+V  G++FYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF  T+VTSWDTPNK PQE YEGGRSF+NCVSE  + ETC+G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX                +GG +A GIFLHRSSD+ EVY                                                        G       DAP+ S+ GRP+ N+F +N I+NT  GVKIK  DN +I+ N FTGT  LEF DA+ T W+ N+     S +C  N+ S        STF S  G +PS
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLP---SGVCIDNVTSDDGNSVPPSTFSSSSG-VPS 365          
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 423 bits (1088), Expect = 8.990e-137
Identity = 229/459 (49.89%), Postives = 289/459 (62.96%), Query Frame = 0
Query:   24 GRMYLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESD--ETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSD--GRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLE---FNDAEDTVWTSNTFEDADSDLCYKNIASSTFESIDGTIPSLC 475
            G+ Y+  GGC T+TD+Y ++    G    GP+++LD ND+++    S TG WLL   + V  GS+    G   GGD   LRIQSTGS D++E+RGHGGSL F  T VTSWDT  K    +Y+  RSFI CVSE  +D  +TC+G   N  GECRMDII SEMG +G+  +ESYG++WKVRG+C++  NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA                             +GG  A GIFLHRSSD CEV+ N V+DM+DAGMAI+ES  A IHDN+FTNVKYGIR+S+G   N V +N F +C  YG+YTYQG+D PEAS D  G   DN+F+ NT+   E GVKI++ +  + T N F   S  E   F D ED VWT+N   D   D+C K   +  +     ++P LC
Sbjct:  398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845          
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 2.330e-136
Identity = 224/431 (51.97%), Postives = 281/431 (65.20%), Query Frame = 0
Query:   27 YLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDET--CEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEA-SSDGRPSDNSFYDNTISNT--ETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNT 446
            Y E GGCGT+T +Y+++ E DG     P+Y+LD+N+D++    + TG WLL   L V+ GS     GT+  GD D LR+ ST S DF EVRG+GG+L+F+ T VTSWDT N   +E    GRSFINCV++++      C+G+   ++GECRMDII S MG +GWFD+ESYGLTWKVRG C          N E+F+  NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+                             +GG  A GIFLHRSSD  EV+DN V++MQDAGMA++ES+DA+I+DNSFTN +YGIR+SLG G N + +N+F   + YGLYTY GSD P+  +S+GRPSDN F  NTI       GV IKEGD+ +   N FTG S  EF D+ DT W  NT
Sbjct:  192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613          
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 392 bits (1008), Expect = 7.200e-125
Identity = 221/467 (47.32%), Postives = 277/467 (59.31%), Query Frame = 0
Query:    9 GTKASIRWASGTGINGRMYLEDGGCGTMTDLYQSRVEKDGWTPKGPIYILDDNDDIMYS---PTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEYESDE--TCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGM------------------------AILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEAS-SDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSN 445
            GT ASI  +S +          GGC T+TD+Y ++      +  GP+Y+LD +++I+       S TG WLLTS L +L G   Y  GTS GGD D LRIQST   DF E+RG GGSL F +T VTSWDT     + +YEGGRSFINCV++++  +  +C G+   + GECRMDIIDS MG +GWFD+ESYGLTWKVRG C+D SN E+ D  NVYGDIK S+I+ MYYGMYSYGHQGGVWT+N M DN  YGFDPHDDSD LTIA                               G+   GI   +  ++ E+Y                                    A++ESF A+I+DN+  N KYGIR+SLG  +N+++DN FD  STYGLYTY+GSD P+ S +DGR  DNSF  NTISNT+  +KIKEGD+   T N F      EF D+ DTVWT+N
Sbjct:  396 GTIASISTSSDSSS-----FSGGGCATLTDMYNTQ------SGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824          
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 2.900e-123
Identity = 219/476 (46.01%), Postives = 278/476 (58.40%), Query Frame = 0
Query:   13 SIRWASGTGINGRMYLED-------GGCGTMTDLYQSRVEKDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSFINCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVKYGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFYDNTISNTETGVKIKEGDNTIITGNTF-TGTS---LLEFNDAEDTVWTSNTFED-------ADSDLCYKNIASSTFESI 467
            SIR+A   G   R+YLE        GGC T+  +++SR  K      GP+Y +D D+ ++    TS TG WLLT +L+V  G      G+  GGD DELR+ ST  T F  +R HGGSL F  T V SWDT   SP ED   GRS+I+ +SE   + DETCEG  KN  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD  NVYG++ +SDIHHM +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI                               G   +AGIFLHRSSD   V  N VHD  DAG+A+LESF+AD+ +N+F N KYG+R S+G  +N   +N     + Y  Y+Y G+D P+  S GR  +N F  N+ S  E  +KIKE D T    N F  G +   ++ F++A + +   NT  D        D+D C+   A S +E +
Sbjct:   45 SIRYA---GTTARLYLESADNGTTRGGCVTLGQIWESRAGK------GPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPV 507          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig862.20006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM4_ECTSI5.530e-18761.10Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI1.280e-17758.77Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE9.380e-17456.06MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI1.260e-16454.79Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE4.040e-14861.67MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FIU4_ECTSI1.230e-14256.24Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE8.990e-13749.89MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G8D9_ECTSI2.330e-13651.97Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FWE8_ECTSI7.200e-12547.32Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7G339_ECTSI2.900e-12346.01Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 239..261
e-value: 7400.0
score: 1.0
coord: 336..357
e-value: 120.0
score: 11.5
coord: 217..238
e-value: 2500.0
score: 4.3
coord: 313..335
e-value: 2100.0
score: 4.9
coord: 394..415
e-value: 230.0
score: 10.5
coord: 263..285
e-value: 8.8
score: 15.3
coord: 416..445
e-value: 1300.0
score: 6.4
coord: 359..381
e-value: 220.0
score: 10.6
coord: 287..311
e-value: 22.0
score: 14.0
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 218..369
e-value: 2.7E-16
score: 59.8
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 57..392
e-value: 4.0E-87
score: 294.7
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 266..431
NoneNo IPR availablePANTHERPTHR22990:SF15F-BOX ONLY PROTEIN 10coord: 266..431
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 216..431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig862contigF-serratus_M_contig862:69607..72312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig862.20006.1mRNA_F-serratus_M_contig862.20006.1Fucus serratus malemRNAF-serratus_M_contig862 69604..74011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig862.20006.1 ID=prot_F-serratus_M_contig862.20006.1|Name=mRNA_F-serratus_M_contig862.20006.1|organism=Fucus serratus male|type=polypeptide|length=476bp
MTIPDECTGTKASIRWASGTGINGRMYLEDGGCGTMTDLYQSRVEKDGWT
PKGPIYILDDNDDIMYSPTSVTGKWLLTSQLFVLRGSVFYCRGTSIGGDC
DELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEGGRSF
INCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKV
RGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMH
DNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIASKRCNNLKIYGNEVYNG
GSQAAGIFLHRSSDSCEVYDNNVHDMQDAGMAILESFDADIHDNSFTNVK
YGIRISLGGGNNNVYDNVFDQCSTYGLYTYQGSDAPEASSDGRPSDNSFY
DNTISNTETGVKIKEGDNTIITGNTFTGTSLLEFNDAEDTVWTSNTFEDA
DSDLCYKNIASSTFESIDGTIPSLC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence