prot_F-serratus_M_contig855.19943.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig855.19943.1
Unique Nameprot_F-serratus_M_contig855.19943.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length618
Homology
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BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Match: D7FJI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI2_ECTSI)

HSP 1 Score: 460 bits (1184), Expect = 2.070e-152
Identity = 337/574 (58.71%), Postives = 361/574 (62.89%), Query Frame = 0 
Query:    1 MTARRGGPTPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIRAKIEHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSITISGMDPRQFCQTFFLSRQYQENDRHNYFVRNDIFRFLDVLPEVVQAALSSRDNDEGDEAE-----AEGEGHPASVASVEQADDDADTVEEAVGQEMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPAVGTTGATRSPSDAGAGFAARAAGVTSVVTTD-----VTSVAAELENGVMDKLPAAKTDAPAPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MTYASLAKSWATVAAVGGDAAAPSLSAAGXXXXXXXXXXXXXXSV---------------AASGNGVVVTLASNGGWGIPDAAVXXXXXXXXXXXXXXXXXXXXXXXXXXGQGSSRPSSLTGK--KGVTGHIPHHASPAVAASAXXXXEAAAAGNGEILPATSLFVRKVDMTIDKDEMIAHFSTFGAVTGISMNPTRGYAFIDYRNNECVQRALSTKEHYVNRKLLVVEERHSPIVPRSSRDHSGRG 546
            M+ +RG P PAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGL DI+AKI+HLGLGGA VDLGCGSVDAQPSEGGGVLLMVTGSITI+  DPRQFCQTFFL+RQ+Q+NDRHNYFVRNDIFRFLDVLPEVVQAAL +RD ++G  A      AE    P SV          +TV  AV Q  V                            S PA+    A  S S   A   A                   +  A L+NG  DK PAAK   P+P G              XXXXXXXXXXXXXXXXXX MTYASLAKSWATVAA  G           XXXXXXXXXXXXXX                  A   G V+T+    G   P                               Q  SRPSS TGK  KG   +IPHHASPAVAASAXXXXEAAAAGNGEI+PATSLFVRKVDMTID+DEMIAHFS +G VTGISMNPTRGYAFIDYR NECVQ ALSTKEHYVNRKLLVVEERHSP+V R+SR   G G
Sbjct:    1 MSTKRGAPAPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLEDIKAKIKHLGLGGATVDLGCGSVDAQPSEGGGVLLMVTGSITIANTDPRQFCQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQAALKARDEEDGSTARSALPPAEESSKPESVGE--------ETVAAAVTQVHVQDTPVPQQTTASPVATAAVPES------SPPAMAAGAAPPSESQVAASTDAXXXXXXXXXXXXXXXXXAPAAVAGLDNGSADKTPAAKVP-PSPVGASTPAESTETAAAEXXXXXXXXXXXXXXXXXXXMTYASLAKSWATVAADSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVAGGAVLTIEQPVGQPGPGVV----------------------------QHGSRPSSATGKGQKGPGAYIPHHASPAVAASAXXXXEAAAAGNGEIMPATSLFVRKVDMTIDRDEMIAHFSAYGEVTGISMNPTRGYAFIDYRTNECVQIALSTKEHYVNRKLLVVEERHSPMVQRNSRGEHGGG 531
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BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Match: A0A6H5L110_9PHAE (NTF2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L110_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 7.800e-90
Identity = 204/339 (60.18%), Postives = 223/339 (65.78%), Query Frame = 0 
Query:    1 MTARRGGPTPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIRAKIEHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSITISGMDPRQFCQTFFLSRQYQENDRHNYFVRNDIFRFLDVLPEVVQAALSSRDNDEGDEAEAEGEGH--PASVASVEQADDDADTVEEAVGQEMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPAVGTTGATRSPSDAGAGFAARAAGVTSVVTTDVTSVAAELENGVMDKLPAAK---TDAPAPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTYASLAKSWATVAAVGG 334
            M+ RRG P PAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGL DI+AKI+HLGLGGA VDLGCGSVDAQPSEGGGVLLMVTGSITI+  DPRQFCQTFFL+RQ+Q+NDRHNYFVRNDIFRFLDVLPEVVQAAL +RD ++G  A A  E    P SV          +TV  AV Q  V                  XX        +  A  +      P+DA                    +  A L+NG  D+ PAAK   +   A +           XXXXXXXXXXXXXXXXXXXXXXMTYASLAKSWATVAA  G
Sbjct:    1 MSTRRGAPAPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLEDIKAKIKHLGLGGATVDLGCGSVDAQPSEGGGVLLMVTGSITIANTDPRQFCQTFFLARQHQDNDRHNYFVRNDIFRFLDVLPEVVQAALKARDEEDGSSALAPAEESLKPESVGE--------ETVAAAVTQVHVRDTSAPQQTTASPVATAAXXESSPPSMAAGAAPPSESQVAVPADADXXXXXXXXXXXXXXXXXXPAALAGLDNGSADRTPAAKVPPSPVAASTPVESTEKAAAEXXXXXXXXXXXXXXXXXXXXXXMTYASLAKSWATVAADSG 331
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BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Match: A0A835Z9L7_9STRA (NTF2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L7_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.490e-51
Identity = 89/144 (61.81%), Postives = 111/144 (77.08%), Query Frame = 0 
Query:    8 PTPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIRAKIEHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSITISGMDPRQFCQTFFLSRQYQENDRHNYFVRNDIFRFLDVLPEVVQAALSS 151
            P+ AVVG HF+KQYYG+VL  KP EL RFY ++STFCHA G+ +E+PV+GL +I+AKI  LGL  A VDL CGSVDAQPS   G++LMVTGSI + G   RQF QTFFL+ Q Q+N RHNY V NDIFR LD +P+V++AA+ +
Sbjct:   10 PSAAVVGGHFIKQYYGQVLPNKPTELFRFYHEKSTFCHADGSSQEDPVTGLENIKAKILSLGLADATVDLDCGSVDAQPSVDDGIILMVTGSIKLQGQRLRQFAQTFFLALQLQKNGRHNYVVMNDIFRLLDTIPDVLKAAVDA 153
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BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Match: A0A835YRG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG6_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.800e-47
Identity = 85/139 (61.15%), Postives = 107/139 (76.98%), Query Frame = 0 
Query:   12 VVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIRAKIEHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSITISGMDPRQFCQTFFLSRQYQENDRHNYFVRNDIFRFLDVLPEVVQAALS 150
            VVG HF+K +YGEVL +KP+ELHRFY ++STFCHA G K+E+PV GL +I+ KI  LGL  A VDL CGSVD Q S+ G +LLMVTG+IT+ G  PRQF QTF L+   Q + RHN+FV ND+FR LD +PEV++AAL+
Sbjct:   11 VVGHHFIKSFYGEVLPRKPLELHRFYSEQSTFCHAEGNKQEQPVMGLENIKEKIRGLGLADATVDLDCGSVDIQASQNGSILLMVTGAITLRGQAPRQFAQTFLLATHRQMDGRHNFFVLNDVFRLLDTIPEVLEAALA 149
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BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Match: A0A7S2GVT4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVT4_9STRA)

HSP 1 Score: 131 bits (330), Expect = 4.430e-29
Identity = 70/149 (46.98%), Postives = 95/149 (63.76%), Query Frame = 0 
Query:    4 RRGGPTPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIRAKIEHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSITISGMDPRQFCQTFFLSRQYQENDRHN--YFVRNDIFRFLDVLPEVVQAALS 150
            RRG P+PAVVG  F+K+YY ++L+  P  ++RFY+D+S      GT  E+PV G+  I+AKI   G   A+ +L  GS+DAQPS+ GGVLLMVTG+IT     PRQF Q+FFL+ Q      +   YFV ND FR +   P V+ + +S
Sbjct:    9 RRGRPSPAVVGKQFIKRYY-DLLTTDPSLMYRFYQDQSAMVCGEGTHSEDPVMGMEQIKAKIAERGCLNAIFNLEHGSIDAQPSKDGGVLLMVTGTITKKNAPPRQFVQSFFLAEQQNSIKTYPPAYFVLNDTFRIVTPPPNVINSYMS 156
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BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Match: A0A7S2DLV2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLV2_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.070e-27
Identity = 68/154 (44.16%), Postives = 100/154 (64.94%), Query Frame = 0 
Query:    1 MTARRGGPTPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIRAKI----EHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSITIS-GMDPRQFCQTFFLSRQYQENDRHNYFVRNDIFRFLDVLPEVVQAAL 149
            M  ++G P+P  V   FVKQYY ++  K+P +L RFYK+ES F H++G +E + ++G+ +I+A I         G   VDL CGSVDAQPS+ GGV+L+VTG++T       R F Q F+L+ Q  E ++ +YFV ND FR+LD+ P ++ AA+
Sbjct:    1 MPPKKGHPSPRQVAQSFVKQYY-DMYMKQPKDLFRFYKEESHFLHSAGNQERKSITGIEEIKAAIASGYSSNVAGQVQVDLECGSVDAQPSKDGGVILIVTGAMTSKEDKHSRMFVQNFYLAPQ--ETEQASYFVLNDAFRYLDISPSIMDAAM 151
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BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Match: A0A485LI37_9STRA (Aste57867_20882 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI37_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.610e-27
Identity = 67/133 (50.38%), Postives = 87/133 (65.41%), Query Frame = 0 
Query:    8 PTPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIRAKIEHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSITISGMDPRQFCQTFFLSRQYQENDRHNYFVRNDIFRFLDV 140
            P P  VG+ FVKQYY  +L++ P +LHRFYKDESTF H SG++ EE VSG A I + I      GA+V L  GS+D Q S+ GGV+++VTG IT+    P  F QTFFL+ Q+     + YFV ND+ RFL +
Sbjct:    9 PHPTTVGNTFVKQYYS-LLTESPDKLHRFYKDESTFSHGSGSQLEESVSGQASINSTILKKNYYGAVVQLDHGSIDCQASQAGGVVVLVTGVITLQNSAPAHFVQTFFLAVQH-----NGYFVLNDVLRFLHI 135
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BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Match: A0A6G0XNH0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNH0_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.310e-26
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 0 
Query:    8 PTPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIRAKIEHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSITISGMDPRQFCQTFFLSRQYQENDRHNYFVRNDIFRFLDV 140
            P P  VG+ FVKQYY  +L++ P  LHRFYKDESTF H SG++ EE VSG A I + I      GA+V L  GS+D Q S+ GGV+++VTG IT+    P  F QTFFL+ Q +      +FV ND+ RFL++
Sbjct:    9 PHPTTVGNAFVKQYYS-LLTESPETLHRFYKDESTFSHGSGSQPEESVSGQASINSTILKKRYSGAVVQLDHGSIDCQASQAGGVVVLVTGVITLQNSAPTHFVQTFFLAVQEK-----GFFVLNDVLRFLNI 135
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BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Match: A0A0W8CRK0_PHYNI (NTF2 domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CRK0_PHYNI)

HSP 1 Score: 120 bits (301), Expect = 2.780e-26
Identity = 68/151 (45.03%), Postives = 93/151 (61.59%), Query Frame = 0 
Query:    8 PTPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIRAKIEHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSITI-SGMDPRQFCQTFFLSRQYQENDRHNYFVRNDIFRFLDV---LPEVVQAALSSRDN 154
            P+P+ VG+ F++QYY   L+K+P  LHRFYK ES +CH  G+  EEP++G   I  +I   G  GA VDL  GS+D Q S GGGVL++VTG +T+ S   P+ F QTFFL+ Q +      YFV ND  RFL++    P  V   +  ++N
Sbjct:   50 PSPSTVGNTFMRQYY-HFLAKEPQSLHRFYKAESRWCHGLGSHMEEPIAGQRAINDQILKRGYAGARVDLDAGSIDCQNSHGGGVLVLVTGVMTLRSSPTPKPFVQTFFLAVQPK-----GYFVLNDCLRFLELPGAAPVEVAPEVKEKEN 194
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BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Match: A0A7S3Y115_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y115_HETAK)

HSP 1 Score: 114 bits (286), Expect = 3.760e-26
Identity = 70/145 (48.28%), Postives = 90/145 (62.07%), Query Frame = 0 
Query:    1 MTARRGGPTPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTKEEEPVSGLADIRAKIEHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSITIS-GMDPRQ-FCQTFFLSRQYQENDRH-----NYFVRNDIFRFL 138
            M AR   P P+ V + FV  YY  VLSKKP EL RFYK+ES+F   +  +  EPV+G+  I+ KI  LGL GA V++G GSVDAQ S  GGV+++VTG+I ++ G  P Q F QTFFL+ Q            +YFV ND  RF+
Sbjct:    1 MAAR--SPPPSTVATSFVAHYY-RVLSKKPAELFRFYKEESSFTFGAPGEAAEPVTGIEAIKTKITGLGLEGAKVEVGQGSVDAQASRDGGVVMLVTGTIALATGQQPAQAFAQTFFLAPQVVVQQGRTAPVPSYFVLNDTLRFV 142
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig855.19943.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJI2_ECTSI2.070e-15258.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L110_9PHAE7.800e-9060.18NTF2 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A835Z9L7_9STRA2.490e-5161.81NTF2 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A835YRG6_9STRA2.800e-4761.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2GVT4_9STRA4.430e-2946.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2DLV2_9STRA1.070e-2744.16Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A485LI37_9STRA8.610e-2750.38Aste57867_20882 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XNH0_9STRA2.310e-2649.62Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0W8CRK0_PHYNI2.780e-2645.03NTF2 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A7S3Y115_HETAK3.760e-2648.28Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 462..528
e-value: 5.2E-10
score: 49.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 463..516
e-value: 8.6E-8
score: 31.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 461..532
score: 11.673
NoneNo IPR availableGENE3D3.10.450.50coord: 5..141
e-value: 8.9E-33
score: 115.2
NoneNo IPR availablePANTHERPTHR10693:SF20AT27578Pcoord: 6..588
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 454..592
e-value: 3.7E-12
score: 48.5
IPR002075Nuclear transport factor 2PFAMPF02136NTF2coord: 13..137
e-value: 3.3E-20
score: 72.8
IPR039539Ras GTPase-activating protein-binding proteinPANTHERPTHR10693RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEINcoord: 6..588
IPR018222Nuclear transport factor 2, eukaryotePROSITEPS50177NTF2_DOMAINcoord: 13..137
score: 23.227
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 9..137
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 458..563

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig855contigF-serratus_M_contig855:14700..27889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig855.19943.1mRNA_F-serratus_M_contig855.19943.1Fucus serratus malemRNAF-serratus_M_contig855 12302..43297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig855.19943.1 ID=prot_F-serratus_M_contig855.19943.1|Name=mRNA_F-serratus_M_contig855.19943.1|organism=Fucus serratus male|type=polypeptide|length=618bp
MTARRGGPTPAVVGSHFVKQYYGEVLSKKPVELHRFYKDESTFCHASGTK
EEEPVSGLADIRAKIEHLGLGGAMVDLGCGSVDAQPSEGGGVLLMVTGSI
TISGMDPRQFCQTFFLSRQYQENDRHNYFVRNDIFRFLDVLPEVVQAALS
SRDNDEGDEAEAEGEGHPASVASVEQADDDADTVEEAVGQEMVVVEESVA
SAAAAAADDVPPSAESQVAASSSPAVGTTGATRSPSDAGAGFAARAAGVT
SVVTTDVTSVAAELENGVMDKLPAAKTDAPAPSGPASPVPPPPPPAAPAA
PPASPAPRAPPTPSAPMTYASLAKSWATVAAVGGDAAAPSLSAAGGAPAS
SSSVSAGTGSVAASGNGVVVTLASNGGWGIPDAAVVAAAGGSGVGIAETS
SASQVGGASAGGQGSSRPSSLTGKKGVTGHIPHHASPAVAASAAAAREAA
AAGNGEILPATSLFVRKVDMTIDKDEMIAHFSTFGAVTGISMNPTRGYAF
IDYRNNECVQRALSTKEHYVNRKLLVVEERHSPIVPRSSRDHSGRGGRNG
PRGRGIGGRDGREGDRGDRSDRRSTGGRMARGNLGRESLGRESLGRENRA
DSKEGGGYKPRGRAMPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR002075NTF2
IPR039539Ras_GTPase_bind_prot
IPR018222Nuclear_transport_factor_2_euk
IPR032710NTF2-like_dom_sf
IPR035979RBD_domain_sf