prot_F-serratus_M_contig8531.19938.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig8531.19938.1
Unique Nameprot_F-serratus_M_contig8531.19938.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length121
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig8531.19938.1 vs. uniprot
Match: A0A6H5LA89_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA89_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 2.990e-15
Identity = 42/117 (35.90%), Postives = 70/117 (59.83%), Query Frame = 0 
Query:    2 VGYPLVEAKMQEAKSPSGAWKALQDFYMPKTIAEKRRVARELESIKMVDDEDPVEYFGRIDKALQKLALLGGQKDEDDVNVHIIENLSSKYFVEKKILLSRQGITRAEIDELIRSAY 118
            VG P  E  +    S +GAW+ ++D+Y+P   A+ + +  EL++I M DDEDP  +F R+ +   KL  +G  K E +V   ++  L ++Y VEK+  LS + +TRAE+ +++R  Y
Sbjct:  173 VGAPF-ENNLYSCHSVAGAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSEQEVVRILVRQLPARYDVEKRTSLSNRDLTRAELQDVVRGRY 288
[Close]
BLAST of mRNA_F-serratus_M_contig8531.19938.1 vs. uniprot
Match: A0A6H5K4K8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4K8_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.750e-10
Identity = 33/112 (29.46%), Postives = 63/112 (56.25%), Query Frame = 0 
Query:    7 VEAKMQEAKSPSGAWKALQDFYMPKTIAEKRRVARELESIKMVDDEDPVEYFGRIDKALQKLALLGGQKDEDDVNVHIIENLSSKYFVEKKILLSRQGITRAEIDELIRSAY 118
            +E ++        AW  + ++ +P   AEK  + R LE+I+M   EDP  +F R+D  +  +  +G +K E  +   I+  L+ +Y +E+K +L    I+RA+++ ++R+AY
Sbjct:   10 IEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILVDPTISRAKVENVVRTAY 121
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8531.19938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LA89_9PHAE2.990e-1535.90Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4K8_9PHAE1.750e-1029.46Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 11..104
e-value: 6.0E-14
score: 51.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8531contigF-serratus_M_contig8531:5325..5687 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8531.19938.1mRNA_F-serratus_M_contig8531.19938.1Fucus serratus malemRNAF-serratus_M_contig8531 5325..5687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig8531.19938.1 ID=prot_F-serratus_M_contig8531.19938.1|Name=mRNA_F-serratus_M_contig8531.19938.1|organism=Fucus serratus male|type=polypeptide|length=121bp
MVGYPLVEAKMQEAKSPSGAWKALQDFYMPKTIAEKRRVARELESIKMVD
DEDPVEYFGRIDKALQKLALLGGQKDEDDVNVHIIENLSSKYFVEKKILL
SRQGITRAEIDELIRSAYMSD
back to top