prot_F-serratus_M_contig853.19936.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig853.19936.1
Unique Nameprot_F-serratus_M_contig853.19936.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length243
Homology
BLAST of mRNA_F-serratus_M_contig853.19936.1 vs. uniprot
Match: D7G914_ECTSI (ER membrane protein complex subunit 10 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G914_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.410e-71
Identity = 126/226 (55.75%), Postives = 163/226 (72.12%), Query Frame = 0
Query:    5 TTALIAALCCFESGARKITIEHAFSSGTNFSPRGTMDLTIGSEGSP--SATLPPVNLGSDAPQLESLIANNELYLIRVATDDTSTRHIVAAIPACHLRLALFKEDITLHIDWDGLIVGLDYKAPVGPLASTRDCTKMPVPESSNIVTIVKVVRPASAQSVPLQVVTDSPPPGLVNLKENIGGQDPKASNNQSILAKYWYIFVPMLVFWMISP---GTPATPGEAGG 225
            T   +A   C ++ AR +++EHAF     ++ RG ++L I    +   SA+L P  L  DA Q+E LIAN+ LYLIRVATD++S +H+VAA+ AC LRLA F+E+ITLH++ DG+IVG+DYK+ VGPLASTR+CTKMPV E S +VT V VVR ASAQSVPLQV+ +SPPPGL  LKE IG +D KA+ NQS+L KYWYIF+P ++ +M S    G  ATP  AGG
Sbjct:    6 TATSVAFAWCVQASARSLSVEHAFGPAAEWTHRGFLELDIDPSRAKAFSASLQPATL-RDASQMEELIANDGLYLIRVATDESSNQHVVAAVSACQLRLASFREEITLHVERDGVIVGVDYKSLVGPLASTRNCTKMPVAEYSEVVTKVVVVRAASAQSVPLQVLQNSPPPGLSALKEQIGTKDAKAAGNQSLLVKYWYIFLPCVLLFMFSAPDQGGAATPPAAGG 230          
BLAST of mRNA_F-serratus_M_contig853.19936.1 vs. uniprot
Match: A0A7S4D4Q0_HETAK (ER membrane protein complex subunit 10 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4Q0_HETAK)

HSP 1 Score: 95.9 bits (237), Expect = 4.080e-20
Identity = 67/182 (36.81%), Postives = 100/182 (54.95%), Query Frame = 0
Query:   17 SGARKITIEHAFSSGTNFSPRGTMDLTIGSEGSPSATLPPV-----NLGSDAPQLESLIANNELYLIRVATDDTS--TRHIVAAIPACHLRLALFKEDITLHIDWDGLIVGLDYKAPVGPLASTRDCTKMPVPESSNIVTIVKVVRPASAQSVPLQVVTDSPPPGLVNLKE---NIGGQDPK 188
            S + ++ +EH+F+  + FSPR   ++ I S  S   T+  +     + G +  Q++ LIAN   Y IR+ ++ T+  +  ++AAI AC L  A F+E+I LH+D    I+G+ Y AP   LA  RDC   P+PE     T +KV   +  QSVPLQ     PPPGL  L++     GG+D K
Sbjct:   47 SPSLQLQVEHSFTEDSKFSPREDWEMAI-SPVSRQLTVDKLQGSAQSSGMERNQIKDLIANGGFYRIRLHSNPTNPDSPMVMAAISACDLHKANFREEIVLHLDPHQNIIGMTYSAPSSVLA--RDCHSKPLPEDIKFDTKIKVAEASIGQSVPLQAQAARPPPGLAGLQKFRAAAGGEDGK 225          
BLAST of mRNA_F-serratus_M_contig853.19936.1 vs. uniprot
Match: A0A024GPT7_9STRA (ER membrane protein complex subunit 10 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GPT7_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.670e-11
Identity = 53/175 (30.29%), Postives = 89/175 (50.86%), Query Frame = 0
Query:   65 QLESLIANNELYLIRVATD--DTSTRHIVAAIPACHLRLALFKEDITLHIDWDGLIVGLDYKAPVGPLASTRDCTKMPVPESSNIVTIVKVVRPASAQSVPLQ---VVTDSPPPGLVNLKENIGGQDPKASNNQSILAKYWYIFVPMLVFWMISPGTPAT-PGEAGGSTTNAGTQ 233
            +L++++  +ELY IR  +D  D S+ ++  +IP C L  A F+ED++ H+  D  ++G++Y+    PL    +   +  P+ + I +    + P+    +P +       + PPG+V ++     Q   A  N SIL KYWYI +P+LVF +     P T P  A  S    G Q
Sbjct:   85 KLQNMLVASELYTIRARSDPSDPSSPYVYTSIPLCMLASANFREDLSFHLTEDKKLLGMEYRT-FTPLDKCSNNQNIVTPDLT-ITSYGFALEPSLGPEIPKEPNFARGKNIPPGVV-VEPTKEEQKKAAEENPSILRKYWYIILPILVFTLFGAEAPQTSPATASASGPATGQQ 256          
BLAST of mRNA_F-serratus_M_contig853.19936.1 vs. uniprot
Match: F0W3R8_9STRA (Ubiquitin family protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3R8_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.250e-10
Identity = 46/165 (27.88%), Postives = 82/165 (49.70%), Query Frame = 0
Query:   60 GSDAPQLESLIANNELYLIRVATD--DTSTRHIVAAIPACHLRLALFKEDITLHIDWDGLIVGLDYKA--PVGPLASTRDCTKMPVPESSNIVTIVKVVRPASAQSVPLQVV---TDSPPPGLVNLKENIGGQDPKASNNQSILAKYWYIFVPMLVFWMISPGTP 217
            G    +L++++  +ELY IR  +D  D S+ ++  +IP C L    F+ED++ H+  D  ++ ++Y+   P+   A+  +     +P      +    ++P+    +P   +     S PPG+V ++     Q   A  N SIL KYWYI +P+LVF +     P
Sbjct:  136 GKQVGKLQNMLIASELYTIRARSDPSDPSSPYVYTSIPLCMLASTNFREDLSFHLTKDKNLLAMEYRTYTPLSNCATNGNI----IPSDFAFTSYGFALKPSPGPEIPTDTIFARDRSVPPGVV-VEPTKDEQKKAAEENPSILRKYWYIILPILVFTLFGAEAP 295          
BLAST of mRNA_F-serratus_M_contig853.19936.1 vs. uniprot
Match: A0A0B7BSN5_9EUPU (ER membrane protein complex subunit 10 (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7BSN5_9EUPU)

HSP 1 Score: 67.0 bits (162), Expect = 1.180e-9
Identity = 51/193 (26.42%), Postives = 93/193 (48.19%), Query Frame = 0
Query:   18 GARKITIEHAFSSGTNFSPRGTMDLTIGSEGSPSATLPPVNLGSDAPQLESLIANNELYLIRV---ATDDTSTRHIVAAIPACHLRLALFKEDITLHIDWDGLIVGLDYKAPVGPLASTRDCTKMPVPESSNIVTIVKVVRPASAQSVPLQVVTDSPPPGLVNLKENIGGQDPKASNNQSILAKYWYIFVPML 207
            G+R +T+EH FSS + F  RG + +     G             D  QL+SL  N +LY IR+    T D  T ++ +   AC +  +  +++ITL+ D  G ++G+  +A +      + CT + +P++ N+ +    +  +S  + PL            + +E +  QD    +N+S L++YW   VP++
Sbjct:   42 GSRTLTLEHTFSSASQFVKRGIISVQSLKGGKAYFAQASALTKDDIQQLKSLAKNEDLYRIRIPVKGTGDAGTSYVSSVTKACGILESGLQDEITLNFDQSGEVLGVSIRANI------QACTGLEIPDA-NLTSWKTSIEVSSTVAGPLPDTQTYIEKMKRDEQEKLKNQD---GDNRSFLSRYWMYVVPVV 224          
BLAST of mRNA_F-serratus_M_contig853.19936.1 vs. uniprot
Match: A0A7S3P5G2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5G2_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.750e-7
Identity = 44/172 (25.58%), Postives = 72/172 (41.86%), Query Frame = 0
Query:   63 APQLESLIANNELYLIRVATDDTSTRHIVAAIPACHLRLALFKEDITLHIDWDGLIVGLDYKAPVGPLASTRDCTKMPVPESSNIVTIVKVVRPASAQSVPLQVVTDSPPPGLVNLK---------------ENIGGQDPKASNN--QSILAKYWYIFVPMLVFWMISPGTP 217
            A  LE ++ +    +  V    T+T  +   IPACHLR A F+++ITL     G ++ L Y   + PLA  + C  +P P+     + V+        S+   +    PPPGL  +                E  G ++ K  +        +YWYI +P+ +  M+    P
Sbjct:   91 AENLEVMMMSGWYQVKLVEDGKTATVPVKTTIPACHLRRANFRDEITLSFGQQGHVMSLAYSPLISPLAP-KTCDDLPAPQEIQFNSKVEYETAVPGMSLKTILPNYQPPPGLKFISSKHKSPGSVGGDAKPEGFGTKEEKELDTGIMGFFRRYWYIILPIFLMQMMGATEP 261          
BLAST of mRNA_F-serratus_M_contig853.19936.1 vs. uniprot
Match: A0A6P8SKT0_GEOSA (ER membrane protein complex subunit 10 n=2 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8SKT0_GEOSA)

HSP 1 Score: 54.7 bits (130), Expect = 2.660e-5
Identity = 62/222 (27.93%), Postives = 99/222 (44.59%), Query Frame = 0
Query:   10 AALCCFESGARKITIEHAFS--SGTNFSPRGTMDLTIGSEGSPSATLPPVNLGSDAP-QLESLIANNELYLIRV----ATDDTSTRHIVAAIPACHLRLALFKEDITLHIDWDGLIVGLDYKAPVGPLASTRDCTKMPVPESSNIV--TIVKVVRPASAQSVPLQVVTDSPPPGLVNLKENIGGQDPKASNNQ---SILAKYWYIFVPMLVFWMISPGTPAT 219
            A LC  E     + +EH+F   S   F+ RG++     SEGS   T+    L  +   +L  + + N +Y IR+      D+ S +H+ + +PAC +  +   + IT+H D  G I+G+      G       CT   V +    +  T V+V +P +A          + P     ++     Q  KA N Q   S  AKYW   +P+++F M+S G P T
Sbjct:   36 AELCALE-----VQLEHSFELDSSIRFTKRGSLLWNPASEGS--VTISQKQLTEEERIKLRDIASLNGVYRIRIPRKPGLDEGSVQHVTSFVPACSMVESHLSDQITIHTDLAGNIIGVSIVTVPG------SCTGAEVEDVDLELFNTTVQVQQPVAA----------AVPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPIVLFLMMS-GAPDT 233          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig853.19936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G914_ECTSI1.410e-7155.75ER membrane protein complex subunit 10 n=1 Tax=Ect... [more]
A0A7S4D4Q0_HETAK4.080e-2036.81ER membrane protein complex subunit 10 (Fragment) ... [more]
A0A024GPT7_9STRA1.670e-1130.29ER membrane protein complex subunit 10 n=1 Tax=Alb... [more]
F0W3R8_9STRA1.250e-1027.88Ubiquitin family protein putative n=1 Tax=Albugo l... [more]
A0A0B7BSN5_9EUPU1.180e-926.42ER membrane protein complex subunit 10 (Fragment) ... [more]
A0A7S3P5G2_9STRA3.750e-725.58Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6P8SKT0_GEOSA2.660e-527.93ER membrane protein complex subunit 10 n=2 Tax=Geo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029615ER membrane protein complex subunit 10PANTHERPTHR21397:SF4ER MEMBRANE PROTEIN COMPLEX SUBUNIT 10coord: 17..231
NoneNo IPR availablePANTHERPTHR21397NUCLEIC ACID BINGING PROTEINcoord: 17..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..242
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.502

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig853contigF-serratus_M_contig853:307514..320279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig853.19936.1mRNA_F-serratus_M_contig853.19936.1Fucus serratus malemRNAF-serratus_M_contig853 307301..328317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig853.19936.1 ID=prot_F-serratus_M_contig853.19936.1|Name=mRNA_F-serratus_M_contig853.19936.1|organism=Fucus serratus male|type=polypeptide|length=243bp
MKWSTTALIAALCCFESGARKITIEHAFSSGTNFSPRGTMDLTIGSEGSP
SATLPPVNLGSDAPQLESLIANNELYLIRVATDDTSTRHIVAAIPACHLR
LALFKEDITLHIDWDGLIVGLDYKAPVGPLASTRDCTKMPVPESSNIVTI
VKVVRPASAQSVPLQVVTDSPPPGLVNLKENIGGQDPKASNNQSILAKYW
YIFVPMLVFWMISPGTPATPGEAGGSTTNAGTQAPGGARGGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029615Emc10