prot_F-serratus_M_contig853.19932.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig853.19932.1
Unique Nameprot_F-serratus_M_contig853.19932.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length169
Homology
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Match: A0A6H5KG72_9PHAE (S1-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG72_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 6.220e-48
Identity = 105/175 (60.00%), Postives = 123/175 (70.29%), Query Frame = 0
Query:    1 MRILSLLLGVLISLRMANAFVGVPGMLSAPLIAR--QSARRSSCSGLLTRC---QTSISISPVATSTPPSR--QSLSRTSLSAKKKGKGGGTNEGAQPRERKEKDDVIEVEGVVTEGLPSAMFRVEVGDTGKVVLCTISGKIRKNFVRILVGDPVRLELSPYDLTRGRITFRYKK 168
            MR +  LLGV     M  AFVGVP   +A L+AR   S + S C+ L+T       ++      T+  P+   ++ + ++L AK        NEGA+PRERKEKDDVIEVEGVV EGLPSAMFRVEVG TGKVVLCTISG+IRKNFVRILVGDPVR+ELSPYDLTRGRITFRYKK
Sbjct:    1 MRNILWLLGVAALSSMGEAFVGVPVRATA-LVARGRASQQESCCTSLVTHSIHRTFAVDHDGQETARRPANMGRAAATSALLAKXXXXXXXXNEGAKPRERKEKDDVIEVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 174          
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Match: D7G916_ECTSI (S1-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G916_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.530e-46
Identity = 87/124 (70.16%), Postives = 93/124 (75.00%), Query Frame = 0
Query:   72 TSLSAKKKGKGGGTNEGAQPRERKEKDDVIE---------------------------VEGVVTEGLPSAMFRVEVGDTGKVVLCTISGKIRKNFVRILVGDPVRLELSPYDLTRGRITFRYKK 168
            ++L AKKKG+GGG NEGA+PRERKEKDDVIE                           VEGVV EGLPSAMFRVEVG TGKVVLCTISG+IRKNFVRILVGDPVR+ELSPYDLTRGRITFRYKK
Sbjct:    8 SALLAKKKGRGGGNNEGAKPRERKEKDDVIEPDSIFTSHAEKDCSAKACRMLVLLSQKVEGVVKEGLPSAMFRVEVGATGKVVLCTISGRIRKNFVRILVGDPVRVELSPYDLTRGRITFRYKK 131          
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Match: A0A835YXL6_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXL6_9STRA)

HSP 1 Score: 150 bits (380), Expect = 9.000e-44
Identity = 75/97 (77.32%), Postives = 84/97 (86.60%), Query Frame = 0
Query:   72 TSLSAKKKGKGGGTNEGAQPRERKEKDDVIEVEGVVTEGLPSAMFRVEVGDTGKVVLCTISGKIRKNFVRILVGDPVRLELSPYDLTRGRITFRYKK 168
            T +  KKKG+GG   EGA PRE+K KDDVIEVEGVV E LPSAMFRVE+  T +++LCTISGKIRKNFVRILVGDPV++ELSPYDLTRGRITFRYKK
Sbjct:   49 TIMHQKKKGRGGQNTEGATPREKKVKDDVIEVEGVVKESLPSAMFRVEISPTNQIILCTISGKIRKNFVRILVGDPVKVELSPYDLTRGRITFRYKK 145          
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Match: A0A7S4EBF0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBF0_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.090e-34
Identity = 71/110 (64.55%), Postives = 85/110 (77.27%), Query Frame = 0
Query:   57 PVATSTPPSRQSLSRTSLSAKKKGKGGGTNEGAQP-RERKEKDDVIEVEGVVTEGLPSAMFRVEVGDTGKVVLCTISGKIRKNFVRILVGDPVRLELSPYDLTRGRITFR 165
            P  ++   +R++  RT L AKKK K     +  +P RERK KDD IEV+GVVTE LPSA FRVE+G T +V+LCTISGKIRKNFV+ILVGD V++ELSPYDLTRGRITFR
Sbjct:   21 PARSTAAVARRAPGRTQLDAKKKKK---DLQAPKPVRERKVKDDKIEVDGVVTEALPSANFRVEIGATKQVLLCTISGKIRKNFVKILVGDSVKVELSPYDLTRGRITFR 127          
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Match: A0A6U1NIU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NIU1_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.950e-30
Identity = 59/80 (73.75%), Postives = 68/80 (85.00%), Query Frame = 0
Query:   89 AQPRERKEKDDVIEVEGVVTEGLPSAMFRVEVGDTGKVVLCTISGKIRKNFVRILVGDPVRLELSPYDLTRGRITFRYKK 168
            AQP+    K+DVIEVEGVV E LP+AMFRVE+     V+LCTISGKIRKNFV++LVGD VR+ELSPYDLTRGRITFRY+K
Sbjct:   83 AQPKPST-KEDVIEVEGVVKESLPNAMFRVELEANQNVILCTISGKIRKNFVKVLVGDSVRVELSPYDLTRGRITFRYRK 161          
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Match: A0A7R9YY09_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YY09_9STRA)

HSP 1 Score: 108 bits (270), Expect = 5.120e-27
Identity = 57/77 (74.03%), Postives = 64/77 (83.12%), Query Frame = 0
Query:   92 RERKEKDDVIEVEGVVTEGLPSAMFRVEVG---DTGKVVLCTISGKIRKNFVRILVGDPVRLELSPYDLTRGRITFR 165
            RE+K+KDDVIEVEGVV E LP+AMFR  +    DT + VL TISGKIRKNFV+ILVGD V +ELSPYDLTRGRITFR
Sbjct:   77 REKKKKDDVIEVEGVVLESLPNAMFRCAIDGAPDTQEPVLATISGKIRKNFVKILVGDKVTIELSPYDLTRGRITFR 153          
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Match: A0A1Z5KC21_FISSO (Translation initiation factor IF-1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC21_FISSO)

HSP 1 Score: 106 bits (264), Expect = 1.770e-26
Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 0
Query:   92 RERKEKDDVIEVEGVVTEGLPSAMFRVEVG---DTGKVVLCTISGKIRKNFVRILVGDPVRLELSPYDLTRGRITFRYK 167
            R RK KDDVIEVE VV EGLP+AMFR  +    ++ + +L TISGKIRKNFV+ILVGD V +ELSPYDLTRGRITFRY+
Sbjct:   47 RVRKTKDDVIEVEAVVVEGLPNAMFRCAIDGAPESQEPILATISGKIRKNFVKILVGDKVLIELSPYDLTRGRITFRYR 125          
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Match: A0A6U4EV19_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4EV19_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.870e-26
Identity = 67/118 (56.78%), Postives = 81/118 (68.64%), Query Frame = 0
Query:   54 SISPVATSTPPSRQSL--SRTSLSAKKKGKG-GGTNEGAQPRERKEKDDVIEVEGVVTEGLPSAMFRVEVG---DTGKVVLCTISGKIRKNFVRILVGDPVRLELSPYDLTRGRITFR 165
            S+ P A+ST  S  +   S+T+L  KK  +  G   +    R RK+KDDVIEVEG V E LP+AMFR  +    +T + VL TISGKIRKNFV+ILVGD V +ELSPYDLTRGRITFR
Sbjct:   34 SVMPGASSTIASVSATVPSKTALFGKKAARAQGNERKNKTERVRKKKDDVIEVEGTVIESLPNAMFRCAIDGAPETQEPVLATISGKIRKNFVKILVGDSVTIELSPYDLTRGRITFR 151          
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Match: A0A8J9SSB7_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SSB7_PHATR)

HSP 1 Score: 103 bits (257), Expect = 4.720e-26
Identity = 54/74 (72.97%), Postives = 60/74 (81.08%), Query Frame = 0
Query:   97 KDDVIEVEGVVTEGLPSAMFRVEVGD---TGKVVLCTISGKIRKNFVRILVGDPVRLELSPYDLTRGRITFRYK 167
            KDDVIEV GVV E LP+AMFR ++ D   T   VL TISGKIRKNFV+ILVGD V +ELSPYDLTRGRITFRY+
Sbjct:    1 KDDVIEVGGVVLESLPNAMFRCQIDDAPETQAPVLATISGKIRKNFVKILVGDKVLIELSPYDLTRGRITFRYR 74          
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Match: A0A7S2A1G4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A1G4_TRICV)

HSP 1 Score: 105 bits (262), Expect = 7.950e-26
Identity = 61/101 (60.40%), Postives = 73/101 (72.28%), Query Frame = 0
Query:   69 LSRTSLSAKKKGKG-GGTNEGAQPRERKEKDDVIEVEGVVTEGLPSAMFRVEVG---DTGKVVLCTISGKIRKNFVRILVGDPVRLELSPYDLTRGRITFR 165
            L+ T+L  KK  +  G   +    R +K+KDDVIEVEGVV E LP+AMFR  +    +T + VL TISGKIRKNFV+ILVGD V +ELSPYDLTRGRITFR
Sbjct:   52 LTDTALFGKKAARAQGNERKNRTERVKKQKDDVIEVEGVVLESLPNAMFRCAIDGAPETQEPVLATISGKIRKNFVKILVGDKVTIELSPYDLTRGRITFR 152          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig853.19932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG72_9PHAE6.220e-4860.00S1-like domain-containing protein n=1 Tax=Ectocarp... [more]
D7G916_ECTSI1.530e-4670.16S1-like domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YXL6_9STRA9.000e-4477.32S1-like domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S4EBF0_9STRA8.090e-3464.55Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6U1NIU1_9STRA2.950e-3073.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9YY09_9STRA5.120e-2774.03Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A1Z5KC21_FISSO1.770e-2669.62Translation initiation factor IF-1 n=1 Tax=Fistuli... [more]
A0A6U4EV19_9STRA3.870e-2656.78Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A8J9SSB7_PHATR4.720e-2672.97Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A7S2A1G4_TRICV7.950e-2660.40Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004368Translation initiation factor IF-1TIGRFAMTIGR00008TIGR00008coord: 97..166
e-value: 2.2E-27
score: 92.8
IPR004368Translation initiation factor IF-1PANTHERPTHR33370FAMILY NOT NAMEDcoord: 64..167
IPR004368Translation initiation factor IF-1HAMAPMF_00075IF_1coord: 95..167
score: 23.639
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 101..165
e-value: 5.2E-22
score: 77.4
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 91..167
score: 18.86
NoneNo IPR availableGENE3D2.40.50.140coord: 88..167
e-value: 1.6E-30
score: 106.6
NoneNo IPR availablePANTHERPTHR33370:SF1TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTICcoord: 64..167
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..168
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.898
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 75..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig853contigF-serratus_M_contig853:210397..221580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig853.19932.1mRNA_F-serratus_M_contig853.19932.1Fucus serratus malemRNAF-serratus_M_contig853 209938..222204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig853.19932.1 ID=prot_F-serratus_M_contig853.19932.1|Name=mRNA_F-serratus_M_contig853.19932.1|organism=Fucus serratus male|type=polypeptide|length=169bp
MRILSLLLGVLISLRMANAFVGVPGMLSAPLIARQSARRSSCSGLLTRCQ
TSISISPVATSTPPSRQSLSRTSLSAKKKGKGGGTNEGAQPRERKEKDDV
IEVEGVVTEGLPSAMFRVEVGDTGKVVLCTISGKIRKNFVRILVGDPVRL
ELSPYDLTRGRITFRYKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004368TIF_IF1
IPR006196RNA-binding_domain_S1_IF1
IPR012340NA-bd_OB-fold