prot_F-serratus_M_contig848.19870.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig848.19870.1
Unique Nameprot_F-serratus_M_contig848.19870.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length313
Homology
BLAST of mRNA_F-serratus_M_contig848.19870.1 vs. uniprot
Match: A0A6H5KVD6_9PHAE (DUF4524 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD6_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 7.100e-22
Identity = 84/184 (45.65%), Postives = 100/184 (54.35%), Query Frame = 0
Query:   55 ERGGASFVAFADGRARGVFSDRTIVTLGAP-FPKAAYGM--------------ISHRAP--VCGAAIGVGRPHSGPGEGEEEHGEVDRNVECVLPDGTVRRFSLLSMSREEAFSNRRGGA---ISGNRG---LVPCVAAVRRFEVRARADPAERRASAAREEAVRLAASVELDRNRRFIELHRL 215
            ERGGASFVAFADGRARG F+DRTIV+LGAP F +   G               IS+       G A  V RP     + EEE  E DR +EC+  DGTV R +  S+ R  +F  R GG     SGN G   L P V AV RF   A   PA+RRA+A RE A     + E +RNRRF++L  L
Sbjct:  718 ERGGASFVAFADGRARGAFADRTIVSLGAPVFYRPLRGSRCGGXXXXXXXXRGISYYGSGGPKGVATAVVRPGCSDVD-EEEKEEEDREIECIRADGTVLRLTRHSLDRRGSFGGRSGGGNSPASGNCGVGALRPYVVAVLRFADWAATHPADRRAAAGREAAGXXXXAAEAERNRRFVDLQLL 900          
BLAST of mRNA_F-serratus_M_contig848.19870.1 vs. uniprot
Match: D8LL70_ECTSI (DUF4524 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL70_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 5.080e-19
Identity = 89/256 (34.77%), Postives = 113/256 (44.14%), Query Frame = 0
Query:   17 SGVLLPTAKAATVPASAFRATSP-PRNKPYM----------------------SADVLWGEERGGASFVAFADGRARGVFSDRTIVTLGAPFPKAAYGMISHRAPVCGAAIGVG---------------------RPHSGPGEGEEEHGEVDRNVECVLPDGTVRRFSLLSMSREEAFSNRRGGA---ISGNRG---LVPCVAAVRRFEVRARADPAERRASAAREEAVRLAASVELDRNRRFIELHRLMRRQARP 222
            S +  P++ ++ V A    A +P P NKPY                       S  V+   ERGGASFVAFADGRARG F+DRTIV LGAPF            P+ G+  GVG                                      R VEC+  DGTV R +  S+ R  +F  R GG      G+ G   L P V AV RF   A   PA+RRA+A RE A     + E +RNRRF++L  L  +++ P
Sbjct:  502 SALSSPSSSSSPVEAVVRNAAAPRPTNKPYAPPEEGGARWLGSSSSRGRMAAGSPSVVESVERGGASFVAFADGRARGTFADRTIVCLGAPF---------FYRPLRGSRCGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVECIRADGTVLRLTRRSLDRRGSFGGRSGGGNIPAGGDCGVGALRPYVVAVLRFADWAATHPADRRAAAGREAAXXXXXAAEAERNRRFVDLQLLAAKRSVP 748          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig848.19870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVD6_9PHAE7.100e-2245.65DUF4524 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LL70_ECTSI5.080e-1934.77DUF4524 domain-containing protein n=1 Tax=Ectocarp... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig848contigF-serratus_M_contig848:247074..248012 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig848.19870.1mRNA_F-serratus_M_contig848.19870.1Fucus serratus malemRNAF-serratus_M_contig848 246323..248129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig848.19870.1 ID=prot_F-serratus_M_contig848.19870.1|Name=mRNA_F-serratus_M_contig848.19870.1|organism=Fucus serratus male|type=polypeptide|length=313bp
MLDSACFWGERAAPEGSGVLLPTAKAATVPASAFRATSPPRNKPYMSADV
LWGEERGGASFVAFADGRARGVFSDRTIVTLGAPFPKAAYGMISHRAPVC
GAAIGVGRPHSGPGEGEEEHGEVDRNVECVLPDGTVRRFSLLSMSREEAF
SNRRGGAISGNRGLVPCVAAVRRFEVRARADPAERRASAAREEAVRLAAS
VELDRNRRFIELHRLMRRQARPDRRDTQSAAAAAEARPSPLQRSEGESPA
SAPYQHRRREGEKEKDYIDRARIGGVVVRGRAPTGDLERNALVERVLKAN
LKVLLGQTPSYS*
back to top