prot_F-serratus_M_contig848.19862.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig848.19862.1
Unique Name	prot_F-serratus_M_contig848.19862.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	128

Homology

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BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Match: A0A2R4QQ71_9PHAE (Ribosomal protein L16 n=3 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ71_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 9.840e-82
Identity = 124/125 (99.20%), Postives = 124/125 (99.20%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125
            MLQPKKTKYRKYFKPRILPKILAKTQKLNELNC ALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN
Sbjct:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCLALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125

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BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Match: A0A1L2F1H6_9PHAE (RpL16 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1H6_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 1.060e-58
Identity = 93/123 (75.61%), Postives = 105/123 (85.37%), Query Frame = 0

Query:    3 QPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125
            QPKKTKYRKYFKPR LPK   KTQKL E +CFALI ++S YINGQQ+EAARQNIRRK+KREGKLEI +LTD  IS KPTAARMGKGKGK+ +WVAS+SAGKP+F LYGI  E G PAL++GAN
Sbjct:    4 QPKKTKYRKYFKPRSLPKNTTKTQKLAEHSCFALISLESGYINGQQLEAARQNIRRKVKREGKLEIALLTDKAISNKPTAARMGKGKGKVKHWVASISAGKPIFFLYGIDSERGFPALKAGAN 126

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BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Match: A0A8F0K1B0_9PHAE (Ribosomal protein L16 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K1B0_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.500e-58
Identity = 92/124 (74.19%), Postives = 106/124 (85.48%), Query Frame = 0

Query:    2 LQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125
            +QPKKTKYRKYFKPR LP    +TQ+L ELNCFALI  +S Y+NG+QIEAARQNIRRK+KREGKLEIP+  DIPISRK +AARMGKGKGKI +WVA+L AG+ +FLLYGI  E G+PALQSGAN
Sbjct:    3 IQPKKTKYRKYFKPRRLPSNSTQTQRLGELNCFALITTESGYLNGRQIEAARQNIRRKVKREGKLEIPVFPDIPISRKASAARMGKGKGKIDHWVAALPAGRTIFLLYGIDAEQGIPALQSGAN 126

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BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Match: A0A0G2RKU9_TUROR (Ribosomal protein L16 n=1 Tax=Turbinaria ornata TaxID=86657 RepID=A0A0G2RKU9_TUROR)

HSP 1 Score: 182 bits (463), Expect = 3.520e-57
Identity = 89/125 (71.20%), Postives = 106/125 (84.80%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125
            +LQPKKTKYRKYFKPR+LPK   K +KLNE NCFALI + S +ING+Q+EAARQNIRRKIKREGKLEI +L D  IS KPT+ARMGKGKGK+H+W+A + AGKP+ LLYGI +E G PAL++GAN
Sbjct:    2 LLQPKKTKYRKYFKPRLLPKTTNKPKKLNEQNCFALISLASGHINGRQLEAARQNIRRKIKREGKLEIVLLPDKAISNKPTSARMGKGKGKVHHWIAPIPAGKPILLLYGIDKERGFPALKAGAN 126

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BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Match: A0A1L6KXZ3_9PHAE (Ribosomal protein L16 n=11 Tax=Sargassaceae TaxID=3014 RepID=A0A1L6KXZ3_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.010e-56
Identity = 88/125 (70.40%), Postives = 108/125 (86.40%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125
            +LQPKKTKY+KYFKPR+LP++  KTQKLNE NCFA+I ++S YI+ +Q+EAARQNIRRKIKREGKLEI  L D  IS KPT+ARMGKGKGK+++WVA +SAGKP+ LLYGI +E G PAL++GAN
Sbjct:    2 LLQPKKTKYKKYFKPRLLPRVTTKTQKLNEQNCFAIISLESGYIDVRQLEAARQNIRRKIKREGKLEIIPLADKAISNKPTSARMGKGKGKVNHWVAPISAGKPILLLYGIDKEQGFPALKAGAN 126

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BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Match: A0A3S8PYI0_9PHAE (Ribosomal protein L16 n=5 Tax=Sargassum TaxID=3015 RepID=A0A3S8PYI0_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 5.820e-56
Identity = 87/125 (69.60%), Postives = 106/125 (84.80%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125
            +LQPK+TKY+KYFKPR LPKI  K QKLNE NCFA+I ++S Y+N +Q+EAARQNIRRKIKREGKLEI  L D  IS KPT+ARMGKGKGK+++W+A +  GKP+FLLYGI +E GLPAL++GAN
Sbjct:    2 LLQPKRTKYKKYFKPRSLPKITTKAQKLNEQNCFAIISLESGYLNVKQLEAARQNIRRKIKREGKLEIVPLADKTISNKPTSARMGKGKGKVNHWIAPILVGKPIFLLYGIDKEQGLPALKAGAN 126

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BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Match: A0A0U2M402_9PHAE (Ribosomal protein L16 n=18 Tax=Laminariales TaxID=2886 RepID=A0A0U2M402_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.100e-55
Identity = 90/124 (72.58%), Postives = 104/124 (83.87%), Query Frame = 0

Query:    2 LQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125
            +QPKKTKYRKYFKPR LP    KT KL ELNCFA+I ++S Y+NG+QIEAARQNIRRK+KREGKLEI I  DI ISRK +AARMGKGKGK+ +W+AS+SAG+ LFLLYGI  E G+PAL SGAN
Sbjct:    1 MQPKKTKYRKYFKPRGLPNTSTKTHKLTELNCFAVILMESGYLNGRQIEAARQNIRRKVKREGKLEILIFPDIAISRKASAARMGKGKGKVDHWIASVSAGQNLFLLYGIDAEQGIPALHSGAN 124

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BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Match: A0A068LH27_9PHAE (Ribosomal protein L16 n=3 Tax=Sargassum TaxID=3015 RepID=A0A068LH27_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.170e-55
Identity = 90/125 (72.00%), Postives = 106/125 (84.80%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125
            +LQPKKTKY+KYFKPR LPKI  KTQKL+E  CFA+I ++S YIN QQ+EAARQNIRRKIKREGKLEI  L D  IS KPT+ARMGKGKGK+++WVA + AGKPL LL+GI +E GLPAL++GAN
Sbjct:    2 LLQPKKTKYKKYFKPRALPKITTKTQKLSEPGCFAIISLESGYINVQQLEAARQNIRRKIKREGKLEILPLADKAISNKPTSARMGKGKGKVNHWVAPILAGKPLLLLHGINKEQGLPALKAGAN 126

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BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Match: A0A089N0Z2_PETFA (Ribosomal protein L16 n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A089N0Z2_PETFA)

HSP 1 Score: 179 bits (453), Expect = 1.170e-55
Identity = 89/125 (71.20%), Postives = 107/125 (85.60%), Query Frame = 0

Query:    1 MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125
            ++QPKKTKYRKYFKPR LPK   KTQKL ELN FALI ++S ++NG+QIEAARQNIRRK+KREGKLEI +  DI ISRK +AARMGKGKGK+ +WVA+LSAG+ +FLLYG+  E G+PAL+SGAN
Sbjct:    2 LIQPKKTKYRKYFKPRGLPKSSTKTQKLKELNYFALIAMESGFLNGKQIEAARQNIRRKVKREGKLEILVFPDIAISRKASAARMGKGKGKVDHWVAALSAGRTVFLLYGVDAEQGIPALRSGAN 126

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BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Match: F8UWL8_9PHAE (Ribosomal protein L16 n=20 Tax=Saccharina TaxID=309357 RepID=F8UWL8_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 9.030e-55
Identity = 88/124 (70.97%), Postives = 103/124 (83.06%), Query Frame = 0

Query:    2 LQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIEAARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLSAGKPLFLLYGIIEEVGLPALQSGAN 125
            +QPKKTKYRKYFKPR LP    KT KL EL CFA+I + S Y+NG+QIE+ARQNIRRK+KREGKLEI I  DI ISRK +AARMGKGKGK+ +W+AS+SAG+ LFLLYGI +E G+PAL SGAN
Sbjct:    1 MQPKKTKYRKYFKPRGLPNTSGKTHKLTELTCFAVIAMGSGYLNGRQIESARQNIRRKVKREGKLEILIFPDIAISRKASAARMGKGKGKVDHWIASISAGQTLFLLYGIDDEQGIPALHSGAN 124

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig848.19862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2R4QQ71_9PHAE	9.840e-82	99.20	Ribosomal protein L16 n=3 Tax=Fucus TaxID=3011 Rep...	[more]
A0A1L2F1H6_9PHAE	1.060e-58	75.61	RpL16 n=1 Tax=Coccophora langsdorfii TaxID=74099 R...	[more]
A0A8F0K1B0_9PHAE	1.500e-58	74.19	Ribosomal protein L16 n=1 Tax=Analipus japonicus T...	[more]
A0A0G2RKU9_TUROR	3.520e-57	71.20	Ribosomal protein L16 n=1 Tax=Turbinaria ornata Ta...	[more]
A0A1L6KXZ3_9PHAE	1.010e-56	70.40	Ribosomal protein L16 n=11 Tax=Sargassaceae TaxID=...	[more]
A0A3S8PYI0_9PHAE	5.820e-56	69.60	Ribosomal protein L16 n=5 Tax=Sargassum TaxID=3015...	[more]
A0A0U2M402_9PHAE	1.100e-55	72.58	Ribosomal protein L16 n=18 Tax=Laminariales TaxID=...	[more]
A0A068LH27_9PHAE	1.170e-55	72.00	Ribosomal protein L16 n=3 Tax=Sargassum TaxID=3015...	[more]
A0A089N0Z2_PETFA	1.170e-55	71.20	Ribosomal protein L16 n=4 Tax=Scytosiphonaceae Tax...	[more]
F8UWL8_9PHAE	9.030e-55	70.97	Ribosomal protein L16 n=20 Tax=Saccharina TaxID=30...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000114	Ribosomal protein L16	PRINTS	PR00060	RIBOSOMALL16	coord: 90..119 score: 31.47 coord: 44..55 score: 48.33 coord: 60..89 score: 45.73
IPR000114	Ribosomal protein L16	TIGRFAM	TIGR01164	TIGR01164	coord: 2..122 e-value: 3.8E-27 score: 92.9
IPR000114	Ribosomal protein L16	PANTHER	PTHR12220	50S/60S RIBOSOMAL PROTEIN L16	coord: 1..123
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10		coord: 1..127 e-value: 6.8E-29 score: 103.0
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 1..122
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 4..121 e-value: 4.4E-23 score: 81.7
None	No IPR available	PANTHER	PTHR12220:SF13	39S RIBOSOMAL PROTEIN L16, MITOCHONDRIAL	coord: 1..123
IPR020798	Ribosomal protein L16, conserved site	PROSITE	PS00701	RIBOSOMAL_L16_2	coord: 84..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig848	contig	F-serratus_M_contig848:99994..100377 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig848.19862.1	mRNA_F-serratus_M_contig848.19862.1	Fucus serratus male	mRNA	F-serratus_M_contig848 99991..100377 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig848.19862.1 ID=prot_F-serratus_M_contig848.19862.1|Name=mRNA_F-serratus_M_contig848.19862.1|organism=Fucus serratus male|type=polypeptide|length=128bp
MLQPKKTKYRKYFKPRILPKILAKTQKLNELNCFALIPIQSVYINGQQIE
AARQNIRRKIKREGKLEIPILTDIPISRKPTAARMGKGKGKIHNWVASLS
AGKPLFLLYGIIEEVGLPALQSGANVF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000114	Ribosomal_L16
IPR036920	Ribosomal_L10e/L16_sf
IPR016180	Ribosomal_L10e/L16
IPR020798	Ribosomal_L16_CS