prot_F-serratus_M_contig8472.19857.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig8472.19857.1
Unique Nameprot_F-serratus_M_contig8472.19857.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length48
Homology
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BLAST of mRNA_F-serratus_M_contig8472.19857.1 vs. uniprot
Match: A0A6H5JEW8_9PHAE (53EXOc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW8_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 2.110e-10
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0 
Query:    1 MAFDVGRETTFRRAMFPAYKAQRKPIPIDLELQVRRRAAGSRSL 44
            MAFDVGRETTFRR ++P YKAQRKP+P+DL LQ+    A S +L
Sbjct:   71 MAFDVGRETTFRRKLYPQYKAQRKPVPLDLTLQIPLAKALSEAL 114
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8472.19857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JEW8_9PHAE2.110e-1065.9153EXOc domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..46
e-value: 3.6E-7
score: 31.6
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 2..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8472contigF-serratus_M_contig8472:507..650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8472.19857.1mRNA_F-serratus_M_contig8472.19857.1Fucus serratus malemRNAF-serratus_M_contig8472 507..668 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig8472.19857.1 ID=prot_F-serratus_M_contig8472.19857.1|Name=mRNA_F-serratus_M_contig8472.19857.1|organism=Fucus serratus male|type=polypeptide|length=48bp
MAFDVGRETTFRRAMFPAYKAQRKPIPIDLELQVRRRAAGSRSLDLWI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN-like_dom_sf