prot_F-serratus_M_contig847.19845.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig847.19845.1
Unique Nameprot_F-serratus_M_contig847.19845.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length639
Homology
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Match: D7FIA6_ECTSI (Similar to cyclin T2 isoform b isoform 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA6_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 8.120e-32
Identity = 82/210 (39.05%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    3 SAALLLASKAEEFPVSMEDVLMVTFDVWNNPNNDPDKRKKYYKSEKYEDDARKMAGAERALMCAVNFDFNIEHAYPYVYEAIEIMGENGWLKENEQFAAVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENWRIALELGDEQILKHACCELLECLDEDYGQTGIKLTRTMVVDALMIAGMVRSNN-PTSKPRPP 211
            +AA+ LASK EEF V ++DV+MVT  V +      ++R+    S++Y     ++  AE  L+ A+ FDF IEH + +  + +  + E GW+  ++     KG+  LL +SLRGT+CLEYPP++RAR+  +++LL N I  P      W   +E  D + L  A C+LLE LD+D G+TG K+T+  V  AL+ AG +++ N P   PR P
Sbjct:  115 AAAIFLASKVEEFRVHIKDVMMVTHRVRHK-----NERRLVENSDEYNRYKDRLLKAENQLVNALGFDFMIEHPFGHSNDLVAYLCEEGWVPADKSALISKGSHHLLIKSLRGTLCLEYPPTFRARLVTYLSLLVNNISPPPG---GWAEMIEFEDHRRLNRAACQLLETLDDDSGKTGKKITKKRVAAALVEAGHIKNKNAPNRVPRQP 316          
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Match: D7FVH4_ECTSI (Si:dkey-18f23.10 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH4_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 2.090e-28
Identity = 78/194 (40.21%), Postives = 113/194 (58.25%), Query Frame = 0
Query:    3 SAALLLASKAEEFPVSMEDVLMVTFDVWNNP---NNDPDKRKKYYKSEKYEDDARKMAGAERALMCAVNFDFNIEHAYPYVYEAIEIMGENGWLKENEQFAAVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENWRIALELGDEQILKHACCELLECLDEDYGQTGIKLTRTMVVDAL 193
            +A++LLASK E+F + ++DVL+VT  V N      +DP +  K +K+        ++   E  +M A+ FDF IEHAYP+  + I      GW++EN      KG   LL+QSL+ TMCLEYPP++RAR+A +++LL N +  P  +   W   L+  D   L+ A  E LE LD D G++G K+TR  V  AL
Sbjct:  124 AASVLLASKVEDFKIHIKDVLIVTNKVANYAIIGRSDPSEAYKRFKT--------RVVKVENKIMSALGFDFLIEHAYPHANDLILHFQRMGWVRENMGALISKGCCHLLSQSLKWTMCLEYPPTFRARLATYLSLLVNNV--PPPQSGEWTEVLQFKDPGQLERATEEWLETLDNDTGKSGTKITRHRVTKAL 307          
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Match: A0A6H5JJ90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ90_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 3.620e-21
Identity = 65/181 (35.91%), Postives = 99/181 (54.70%), Query Frame = 0
Query:   73 IEHAYPYVYEAIEIMGENGWLKENEQFAAVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENWRIALELGDEQILKHACCELLECLDEDYGQTGIKLTRTMVVDALMIAGMVRSNN-PTSKPRPPRTFDQRKEAGLQRASSSGKTSLGKRRPSEGTITDGSMLWRR 252
            IEH + +  + +  + E GW+  ++     KG+  LL +SLRGT+CLEYPP++RAR+  +++LL N I  P      W   +E  D + L  A C+LLE LD+D G+TG K+T+  V  AL+ AG +++ N P   PR P          +   SSS ++S G +R   G   + S +  R
Sbjct:    2 IEHPFGHSNDLVAYLCEEGWVPADKSALISKGSHHLLIKSLRGTLCLEYPPTFRARLVTYLSLLVNNISPPPG---GWAEMIEFEDHRQLNRAACQLLETLDDDSGKTGKKITKKRVAAALVEAGHIKNKNAPNRVPRQPSGLTYADRDRMAARSSSIQSSHGLKRGMGGGDLNSSAVASR 179          
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Match: A0A7J6WGZ0_THATH (Cyclin-t1-4 n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A7J6WGZ0_THATH)

HSP 1 Score: 73.2 bits (178), Expect = 6.070e-10
Identity = 52/194 (26.80%), Postives = 100/194 (51.55%), Query Frame = 0
Query:    1 MGSAALLLASKAEEFPVSMEDVLMVTFDVWNNPNNDPDKRKKYYKSEKYEDDARKMAGAERALMCAVNFDFNIEHAYPYVYEAIEIMGENGWLKENEQFAAVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENWRIALELGDEQILKHACCELLECLDEDYGQ----TGIKLTRTMVV 190
            + + ++ LASK EE P  + DV++V +++ +    DP   ++  + + YE     +  AER L+  + FDFNI+H Y  +  A++ +     + +N+     + A   +N  LR ++CL+Y P Y A  ++++A     +  P EK + W +  ++   Q L+    ++L+ L+E+  Q    +  K T+  VV
Sbjct:  108 IATVSMFLASKVEETPRLLVDVIVVAYEMIHR--RDPSAPQRIKQKDVYEKQKELVLIAERLLLVTIGFDFNIQHPYKPLVAALKKLD----ISQND---VARVAWNFVNDWLRTSLCLQYKPHYIAAGSMYLAAKFCKVKLPSEKEKVWWLEFDVSPHQ-LEEVIKKMLKVLEENKRQPVPSSSDKATKAAVV 291          
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Match: A0A7J6EC76_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6EC76_CANSA)

HSP 1 Score: 70.1 bits (170), Expect = 4.900e-9
Identity = 45/176 (25.57%), Postives = 90/176 (51.14%), Query Frame = 0
Query:    1 MGSAALLLASKAEEFPVSMEDVLMVTFDVWNNPNNDPDKRKKYYKSEKYEDDARKMAGAERALMCAVNFDFNIEHAYPYVYEAIEIMGENGWLKENEQFAAVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENWRIALELGDEQILKHACCELLECLDED 176
            + +A + LA K EE P  +++V+++++++ N    DP   ++  + E YE     +  AER ++  + FDFN++H Y  + EAI+         +  Q A  + A   +N  LR ++CL++ P + A  A+F+A     +  P +  + W    ++   Q L+    ++LE  +++
Sbjct:  116 IATACMFLAGKVEETPRLLKEVILISYEIINK--KDPAAAQRIKQKEVYEQQKELVLLAERIVLATLGFDFNVQHPYKPLVEAIKKF-------KVAQHALAQVAWNFVNDGLRTSLCLQFKPHHVAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQ-LEEVSNQMLELYEQN 281          
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Match: A0A803Q2T9_CANSA (Uncharacterized protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q2T9_CANSA)

HSP 1 Score: 70.1 bits (170), Expect = 6.870e-9
Identity = 45/176 (25.57%), Postives = 90/176 (51.14%), Query Frame = 0
Query:    1 MGSAALLLASKAEEFPVSMEDVLMVTFDVWNNPNNDPDKRKKYYKSEKYEDDARKMAGAERALMCAVNFDFNIEHAYPYVYEAIEIMGENGWLKENEQFAAVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENWRIALELGDEQILKHACCELLECLDED 176
            + +A + LA K EE P  +++V+++++++ N    DP   ++  + E YE     +  AER ++  + FDFN++H Y  + EAI+         +  Q A  + A   +N  LR ++CL++ P + A  A+F+A     +  P +  + W    ++   Q L+    ++LE  +++
Sbjct:  105 IATACMFLAGKVEETPRLLKEVILISYEIINK--KDPAAAQRIKQKEVYEQQKELVLLAERIVLATLGFDFNVQHPYKPLVEAIKKF-------KVAQHALAQVAWNFVNDGLRTSLCLQFKPHHVAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQ-LEEVSNQMLELYEQN 270          
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Match: A0A068UGY6_COFCA (Uncharacterized protein n=3 Tax=Coffea TaxID=13442 RepID=A0A068UGY6_COFCA)

HSP 1 Score: 68.2 bits (165), Expect = 2.190e-8
Identity = 49/179 (27.37%), Postives = 89/179 (49.72%), Query Frame = 0
Query:    1 MGSAALLLASKAEEFPVSMEDVLMVTFDVWNNPNNDPDKRKKYYKSEKYEDDARKMAGAERALMCAVNFDFNIEHAYPYVYEAIEIMGENGWLKENEQFAAVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENWRIALELGDEQILKHACCELLECLDEDYGQ 179
            + +A++ LASKAEE P  + D+++V + + N    DP   ++  + + Y+     +   ER L+  + FD N+EH Y  +  A++ +     +   E    VK A   +N  LR T+CL+Y P Y A  ++F+A     +  P  K   W +  ++  +Q L+    ++   LD++  Q
Sbjct:  106 IATASMFLASKAEETPRWLSDLVVVAYKLANKW--DPFAPQRIRQRDIYDKQKETVVLGERLLLATLAFDLNVEHPYKPLVAAVKKLD----IPHKE---LVKVAWNFVNDWLRTTLCLQYKPHYIAAGSLFLAAKLQKVKLPTTKGNVWWLQFDVSPKQ-LEVVIQQMFRLLDQNQKQ 274          
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Match: A0A2G9HVL9_9LAMI (CDK9 kinase-activating protein cyclin T n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HVL9_9LAMI)

HSP 1 Score: 68.2 bits (165), Expect = 2.220e-8
Identity = 46/167 (27.54%), Postives = 86/167 (51.50%), Query Frame = 0
Query:    1 MGSAALLLASKAEEFPVSMEDVLMVTFDVWNNPNNDPDKRKKYYKSEKYEDDARKMAGAERALMCAVNFDFNIEHAYPYVYEAIEIMGENGWLKENEQFAAVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENWRIALELGD---EQILKH 164
            + +A++ LASKAE+ P  ++D+++V + +  +   DP   ++  + E Y+   + +   E+ ++  V FD NIEH Y  +  A++ +G +       Q   VK A   +N  LR T+CL+Y P Y A  +VF+A     I   +     W +  ++     E++++H
Sbjct:  117 VANASMFLASKAEDTPRWLKDIVVVAYKLMYSW--DPSAPQRIRQKEVYDKQKQLILQGEQLILVTVAFDLNIEHPYKPLVAALKRLGIS-------QKEVVKVAWNFVNDWLRTTLCLQYKPQYIAAGSVFLATKLQKIKLSILNGTAWWMQFDVSPGQLEEVIQH 274          
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Match: A0A7I8KF15_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KF15_SPIIN)

HSP 1 Score: 68.6 bits (166), Expect = 2.300e-8
Identity = 46/177 (25.99%), Postives = 87/177 (49.15%), Query Frame = 0
Query:    1 MGSAALLLASKAEEFPVSMEDVLMVTFDVWNNPNNDPDKRKKYYKSEKYEDDARKMAGAERALMCAVNFDFNIEHAYPYVYEAIEIMGENGWLKENEQFAAVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENWRIALELGDEQILKHACCELLECLDEDY 177
            + +  + LA K EE P S+ +V++V++D+ +    DP  R++  + E YE     +   ER ++  + FD N+ H Y  + EAI+            Q A  + A   +N  LR ++CL+Y P + A  A+F+A     +  P +  + W    ++   Q L+    ++LE  ++++
Sbjct:  107 IATVCMFLAGKVEETPHSLNNVILVSYDIIHK--KDPAARQRIKQKEVYEQQKELILLGERVVLTTLGFDLNVHHPYRPLVEAIKKF-------RVAQNALAQVAWNFVNDGLRTSLCLQYKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQ-LEDVSNQMLELYEQNH 273          
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Match: UPI001CC3B5F0 (cyclin-T1-4-like isoform X1 n=3 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3B5F0)

HSP 1 Score: 67.4 bits (163), Expect = 4.270e-8
Identity = 47/157 (29.94%), Postives = 78/157 (49.68%), Query Frame = 0
Query:    1 MGSAALLLASKAEEFPVSMEDVLMVTFDVWNNPNNDPDKRKKYYKSEKYEDDARKMAGAERALMCAVNFDFNIEHAYPYVYEAIEIMGENGWLKENEQFAAVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENWRIALELG 157
            + SA + LASK EE P  ++DV+ V ++  N    DP   ++  + E +E     +   ER L+  V FD NI+H Y  +  AI+ +     +  NE    VK A   +N  L  T+CL+Y P Y A  ++F+A   + +    E+ + W +  ++ 
Sbjct:  111 IASACMFLASKVEETPRLLKDVVAVAYETINR--RDPAAAQRIKQKEVFEKQKELIVIGERLLLTTVAFDLNIQHPYKPLVAAIKRLK----ISHNE---LVKVAWNFVNDWLWTTLCLQYKPHYIAAGSLFLAAKFHKVKLSAERGKAWWLEFDVA 258          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig847.19845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIA6_ECTSI8.120e-3239.05Similar to cyclin T2 isoform b isoform 9 n=1 Tax=E... [more]
D7FVH4_ECTSI2.090e-2840.21Si:dkey-18f23.10 protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JJ90_9PHAE3.620e-2135.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7J6WGZ0_THATH6.070e-1026.80Cyclin-t1-4 n=2 Tax=Thalictroideae TaxID=1463137 R... [more]
A0A7J6EC76_CANSA4.900e-925.57Uncharacterized protein n=1 Tax=Cannabis sativa Ta... [more]
A0A803Q2T9_CANSA6.870e-925.57Uncharacterized protein n=3 Tax=Cannabis sativa Ta... [more]
A0A068UGY6_COFCA2.190e-827.37Uncharacterized protein n=3 Tax=Coffea TaxID=13442... [more]
A0A2G9HVL9_9LAMI2.220e-827.54CDK9 kinase-activating protein cyclin T n=1 Tax=Ha... [more]
A0A7I8KF15_SPIIN2.300e-825.99Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
UPI001CC3B5F04.270e-829.94cyclin-T1-4-like isoform X1 n=3 Tax=Telopea specio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 323..344
score: 37.27
coord: 277..293
score: 24.71
coord: 303..315
score: 30.77
coord: 352..368
score: 40.0
coord: 371..388
score: 47.78
NoneNo IPR availableGENE3D1.10.472.10coord: 1..71
e-value: 9.1E-10
score: 40.4
NoneNo IPR availableGENE3D1.10.472.10coord: 73..180
e-value: 2.9E-7
score: 32.5
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 3..366
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 13..638
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 9..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..12
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 2..73
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 74..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig847contigF-serratus_M_contig847:29521..127162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig847.19845.1mRNA_F-serratus_M_contig847.19845.1Fucus serratus malemRNAF-serratus_M_contig847 17105..127244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig847.19845.1 ID=prot_F-serratus_M_contig847.19845.1|Name=mRNA_F-serratus_M_contig847.19845.1|organism=Fucus serratus male|type=polypeptide|length=639bp
MGSAALLLASKAEEFPVSMEDVLMVTFDVWNNPNNDPDKRKKYYKSEKYE
DDARKMAGAERALMCAVNFDFNIEHAYPYVYEAIEIMGENGWLKENEQFA
AVKGAIPLLNQSLRGTMCLEYPPSYRARIAVFMALLCNGIYAPVEKVENW
RIALELGDEQILKHACCELLECLDEDYGQTGIKLTRTMVVDALMIAGMVR
SNNPTSKPRPPRTFDQRKEAGLQRASSSGKTSLGKRRPSEGTITDGSMLW
RRPPPPRPPSAGFGTASKISSSTLMPPPPARPKPSASSKSALSSTRQPPT
ASEFMPATSSKPRPPASLKPNLHRSEPKPPSVSKPLYTPNPKRVSNPTGT
LKTPKPPLTTKPPSASKTSCKPTPPTRPKPRPPSTPLPSASKMLCKPMLP
ARPKPRPPSTPKPPLPPNPRPPSAPKSPLASKFVTESKLRPPSAPKTRPP
SVPTPPSALKPPTRSIPRPPSTPKPSSTPDLRPPSAPKPPLTSKLLTGSK
PRPPSVSKLPSRPYPPLPLAPPPPSALKTSTGSKPRPPTTPRPQLAPNPR
APTPPKPLPTPDSFSQKRFAVEKETLDACDGLPIGKRSRFVSDADKVYPA
SRKKTRLSCDSYGASSPGVFEEVTLQSGRGKGGSSLQK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf