prot_F-serratus_M_contig8468.19843.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig8468.19843.1
Unique Nameprot_F-serratus_M_contig8468.19843.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length36
Homology
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Match: A0A7S4EAD1_9STRA (Threonine--tRNA ligase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAD1_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.290e-10
Identity = 26/34 (76.47%), Postives = 33/34 (97.06%), Query Frame = 0
Query:    2 DTSEMKRPVMVHRAMLGSVERMIAVLTEHYGGKW 35
            +T+E KRP+++HRAMLGSVERM+AVLTEH+GGKW
Sbjct:  613 ETTEEKRPIIIHRAMLGSVERMMAVLTEHWGGKW 646          
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Match: D8LFY0_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY0_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.300e-10
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 0
Query:    7 KRPVMVHRAMLGSVERMIAVLTEHYGGKW 35
            KRPVM+HRAMLGS+ERMIAVLTEHYGGKW
Sbjct:  578 KRPVMIHRAMLGSLERMIAVLTEHYGGKW 606          
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Match: A0A2G9QLI8_LITCT (Threonyl-tRNA synthetase (Fragment) n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9QLI8_LITCT)

HSP 1 Score: 59.7 bits (143), Expect = 1.900e-10
Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    2 DTSEMKRPVMVHRAMLGSVERMIAVLTEHYGGKW 35
            D  + KRPV++HRA+LGSVERMIA+LTE+YGGKW
Sbjct:   59 DGDDKKRPVIIHRAILGSVERMIAILTENYGGKW 92          
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Match: A0A6P7VJG9_IXOSC (Threonine--tRNA ligase n=8 Tax=Ixodes TaxID=6944 RepID=A0A6P7VJG9_IXOSC)

HSP 1 Score: 62.0 bits (149), Expect = 3.310e-10
Identity = 26/34 (76.47%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    2 DTSEMKRPVMVHRAMLGSVERMIAVLTEHYGGKW 35
            +T E KRPV++HRA+LGSVERMIA+LTE+YGGKW
Sbjct:  566 ETGEKKRPVIIHRAILGSVERMIAILTENYGGKW 599          
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Match: B8C316_THAPS (Threonine--tRNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C316_THAPS)

HSP 1 Score: 61.6 bits (148), Expect = 4.510e-10
Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    4 SEMKRPVMVHRAMLGSVERMIAVLTEHYGGKW 35
            SE  RPVMVHRAMLGSVERM AVL EHYGGKW
Sbjct:  657 SEFARPVMVHRAMLGSVERMFAVLCEHYGGKW 688          
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Match: A0A8B6C5P6_MYTGA (Threonine--tRNA ligase n=4 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6C5P6_MYTGA)

HSP 1 Score: 61.6 bits (148), Expect = 4.520e-10
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    2 DTSEMKRPVMVHRAMLGSVERMIAVLTEHYGGKW 35
            +  E KRPVM+HRA+LGSVERM+AVLTE+YGGKW
Sbjct:  575 EADEKKRPVMIHRAILGSVERMVAVLTENYGGKW 608          
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Match: A0A0B6Y6P5_9EUPU (Threonyl-tRNA synthetase (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6Y6P5_9EUPU)

HSP 1 Score: 57.4 bits (137), Expect = 5.620e-10
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    2 DTSEMKRPVMVHRAMLGSVERMIAVLTEHYGGKW 35
            D SE  RPVM+HRA+LGS+ERM A+LTE +GGKW
Sbjct:   34 DKSERHRPVMIHRAVLGSIERMTAILTESFGGKW 67          
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Match: UPI001E674110 (threonine--tRNA ligase 1, cytoplasmic-like isoform X1 n=2 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E674110)

HSP 1 Score: 61.2 bits (147), Expect = 6.170e-10
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    2 DTSEMKRPVMVHRAMLGSVERMIAVLTEHYGGKW 35
            +T E KRPV++HRA+LGSVERMIA+LTE YGGKW
Sbjct:  656 ETGEKKRPVIIHRAILGSVERMIAILTESYGGKW 689          
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Match: A0A875S0L6_EENNA (Threonine--tRNA ligase n=1 Tax=Eeniella nana TaxID=13502 RepID=A0A875S0L6_EENNA)

HSP 1 Score: 61.2 bits (147), Expect = 6.180e-10
Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    2 DTSEMKRPVMVHRAMLGSVERMIAVLTEHYGGKW 35
            D+ E+KRPV++HRA+LGSVERM A+LTEHY GKW
Sbjct:  581 DSGEVKRPVIIHRAILGSVERMTAILTEHYAGKW 614          
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Match: A0A8D0DSD4_9SAUR (Threonine--tRNA ligase n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0DSD4_9SAUR)

HSP 1 Score: 61.2 bits (147), Expect = 6.180e-10
Identity = 26/34 (76.47%), Postives = 32/34 (94.12%), Query Frame = 0
Query:    2 DTSEMKRPVMVHRAMLGSVERMIAVLTEHYGGKW 35
            D S+ KRPV++HRA+LGSVERMIA+LTE+YGGKW
Sbjct:  581 DGSDKKRPVIIHRAILGSVERMIAILTENYGGKW 614          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8468.19843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4EAD1_9STRA1.290e-1076.47Threonine--tRNA ligase n=1 Tax=Pelagomonas calceol... [more]
D8LFY0_ECTSI1.300e-1093.10Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
A0A2G9QLI8_LITCT1.900e-1073.53Threonyl-tRNA synthetase (Fragment) n=1 Tax=Lithob... [more]
A0A6P7VJG9_IXOSC3.310e-1076.47Threonine--tRNA ligase n=8 Tax=Ixodes TaxID=6944 R... [more]
B8C316_THAPS4.510e-1087.50Threonine--tRNA ligase n=1 Tax=Thalassiosira pseud... [more]
A0A8B6C5P6_MYTGA4.520e-1076.47Threonine--tRNA ligase n=4 Tax=Mytilus galloprovin... [more]
A0A0B6Y6P5_9EUPU5.620e-1070.59Threonyl-tRNA synthetase (Fragment) n=1 Tax=Arion ... [more]
UPI001E6741106.170e-1076.47threonine--tRNA ligase 1, cytoplasmic-like isoform... [more]
A0A875S0L6_EENNA6.180e-1073.53Threonine--tRNA ligase n=1 Tax=Eeniella nana TaxID... [more]
A0A8D0DSD4_9SAUR6.180e-1076.47Threonine--tRNA ligase n=2 Tax=Salvator merianae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 1..35
e-value: 1.1E-12
score: 49.7
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 4..34
IPR002320Threonine-tRNA ligase, class IIaPANTHERPTHR11451TRNA SYNTHETASE-RELATEDcoord: 4..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8468contigF-serratus_M_contig8468:578..685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8468.19843.1mRNA_F-serratus_M_contig8468.19843.1Fucus serratus malemRNAF-serratus_M_contig8468 578..688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig8468.19843.1 ID=prot_F-serratus_M_contig8468.19843.1|Name=mRNA_F-serratus_M_contig8468.19843.1|organism=Fucus serratus male|type=polypeptide|length=36bp
MDTSEMKRPVMVHRAMLGSVERMIAVLTEHYGGKW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002320Thr-tRNA-ligase_IIa