prot_F-serratus_M_contig846.19834.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig846.19834.1
Unique Name	prot_F-serratus_M_contig846.19834.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	224

Homology

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BLAST of mRNA_F-serratus_M_contig846.19834.1 vs. uniprot
Match: A0A6H5KTK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK9_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 7.440e-28
Identity = 92/229 (40.17%), Postives = 118/229 (51.53%), Query Frame = 0

Query:   19 RRLVATTTLVLPLIFSRTNGFVHNTPMAPTGSRTETLKYYGLSSPAQHQHQQLGGLSIRFLHCRRRQP-RNPISEKGNICYRYLRRHPSTSSSRV----SPLRMMSISAEDLHVSVVSGVPSTT----------------LVIQASHIDPHTKIPRTWTASRSEQDFYDLGVSLMGALGG--AGGKLPGPPRMGSSPAVLEGYLRRLMGEPVVTTLPALYAFLDAPQDL 224
            R +VA+T  ++P +    +  +H T +      T   K  G + P      Q   L  ++   RR    R  IS + +         P + SSR+    S    MS++AE L V VVS    T                 L IQAS+++P T   RTWTASRSE+DF+ LGV+LMG L G  A  K+PGPP  GSSP V E YLRRL+  PVVT+LPALY FLDAP DL
Sbjct:    5 RSVVASTAALIPFLLLAADALLHPTRL------TTPAKPAGSNKPGAAPVPQCSTLPQQYFCFRRTSKYRGDISSRCSSSXXXXXXXPRSRSSRLEDALSYTTRMSLAAEGLDVWVVSDDGRTXXXXXXXXXXXXXXAKLLSIQASYVEPGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPVVFEVYLRRLIDVPVVTSLPALYEFLDAPPDL 227

[Close]

BLAST of mRNA_F-serratus_M_contig846.19834.1 vs. uniprot
Match: D7G4B6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B6_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 7.910e-25
Identity = 59/89 (66.29%), Postives = 68/89 (76.40%), Query Frame = 0

Query:  138 LVIQASHIDPHTKIPRTWTASRSEQDFYDLGVSLMGALGG--AGGKLPGPPRMGSSPAVLEGYLRRLMGEPVVTTLPALYAFLDAPQDL 224
            L IQAS+++  T   RTWTASRSE+DF+ LGV+LMG L G  A  K+PGPP  GSSPAV E YLRRL+  PVVT+LPALY FLDAP DL
Sbjct:   41 LSIQASYVELGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPAVFEVYLRRLIDVPVVTSLPALYEFLDAPPDL 129

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig846.19834.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig846.19834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KTK9_9PHAE	7.440e-28	40.17	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G4B6_ECTSI	7.910e-25	66.29	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 39..224
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 34..38
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 21..33
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..38
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..20

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig846	contig	F-serratus_M_contig846:114987..115658 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig846.19834.1	mRNA_F-serratus_M_contig846.19834.1	Fucus serratus male	mRNA	F-serratus_M_contig846 114980..115658 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig846.19834.1 ID=prot_F-serratus_M_contig846.19834.1|Name=mRNA_F-serratus_M_contig846.19834.1|organism=Fucus serratus male|type=polypeptide|length=224bp
MPETLPVKRERFECANMVRRLVATTTLVLPLIFSRTNGFVHNTPMAPTGS
RTETLKYYGLSSPAQHQHQQLGGLSIRFLHCRRRQPRNPISEKGNICYRY
LRRHPSTSSSRVSPLRMMSISAEDLHVSVVSGVPSTTLVIQASHIDPHTK
IPRTWTASRSEQDFYDLGVSLMGALGGAGGKLPGPPRMGSSPAVLEGYLR
RLMGEPVVTTLPALYAFLDAPQDL