prot_F-serratus_M_contig841.19797.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig841.19797.1
Unique Nameprot_F-serratus_M_contig841.19797.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length149
Homology
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Match: A0A6H5L203_9PHAE (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L203_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 1.810e-58
Identity = 86/100 (86.00%), Postives = 93/100 (93.00%), Query Frame = 0
Query:    1 MEGVGTRFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQYFKQPQYSKFITYPHSLAMLELLIKNPPFRKEIAFVGFRDFVHQQQFLHWQFGK 100
            MEG GTRFE+ELE MNCLASPEYLHYLAQ G+LDD AF+RFLEYLQYFK+P+Y+KFITYPHSLAML+LLI NPPFRKEIA V FRDFVHQQQFLHWQFGK
Sbjct:    1 MEGSGTRFEMELELMNCLASPEYLHYLAQSGYLDDRAFVRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRKEIAHVSFRDFVHQQQFLHWQFGK 100          
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Match: D7FV80_ECTSI (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV80_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.400e-41
Identity = 66/77 (85.71%), Postives = 73/77 (94.81%), Query Frame = 0
Query:    1 MEGVGTRFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQYFKQPQYSKFITYPHSLAMLELLIKNPPFRK 77
            MEG GTRFE+ELE MNCLASPEYLHYLAQGG+LDD AF+RFLEYLQYFK+P+Y+KFITYPHSLAML+LLI NPPFRK
Sbjct:    1 MEGSGTRFEMELELMNCLASPEYLHYLAQGGYLDDRAFIRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRK 77          
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Match: A0A835Z5G5_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G5_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.320e-37
Identity = 61/103 (59.22%), Postives = 79/103 (76.70%), Query Frame = 0
Query:    2 EGVGT-RFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQYFKQPQYSKFITYPHSLAMLELLIKNPPFRKEIAFVGFRDFVHQQQFLHWQFGKREP 103
            E VG  RFE+ELEF+ CLASPEYLH+LAQ  + DD AF+ FL+YL Y+++PQY+K++ YPH LAML+ L+ +  FR E+    FRDFVHQQQF HWQ  +R+P
Sbjct:   19 EDVGAQRFEVELEFVQCLASPEYLHFLAQQRYFDDPAFMAFLQYLTYWRRPQYAKYLMYPHCLAMLDALLNSKRFRSELLMESFRDFVHQQQFFHWQHKRRDP 121          
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Match: A0A7S3XZ41_HETAK (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ41_HETAK)

HSP 1 Score: 130 bits (328), Expect = 6.750e-36
Identity = 58/97 (59.79%), Postives = 79/97 (81.44%), Query Frame = 0
Query:    1 MEGVGTRFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQYFKQPQYSKFITYPHSLAMLELLIKNPPFRKEIAFVGFRDFVHQQQFLHWQ 97
            ++G  +RFE+ELEF+ CL+SPEYLHYLAQ  + +D AF+ FL YLQY+++P+Y+KFI YPH LA +E+L ++  FRKE+A  GF++FVHQQQF HWQ
Sbjct:   40 LDGGHSRFEVELEFVQCLSSPEYLHYLAQNKYFEDPAFINFLHYLQYWRRPEYAKFIIYPHCLAFMEML-EDEAFRKELAKPGFKEFVHQQQFFHWQ 135          
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Match: A0A6U6IBL1_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IBL1_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.480e-35
Identity = 60/95 (63.16%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    7 RFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQYFKQPQYSKFITYPHSLAMLELLIKNPPFRKEIAFVGFRDFVHQQQFLHWQFGKR 101
            RFELELEF+ CLASP YLH+LA  G L DS+FL FLEYL+Y+ +P+Y++FITYPH L  L+LL  N  FR+E+A V FR+FVH+QQF  WQF  R
Sbjct:   33 RFELELEFVQCLASPAYLHHLATSGLLSDSSFLSFLEYLRYWSRPEYARFITYPHCLYFLDLLTTNETFRREMANVAFRNFVHEQQFYSWQFRSR 127          
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Match: A0A7S2XM67_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XM67_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.460e-33
Identity = 55/92 (59.78%), Postives = 72/92 (78.26%), Query Frame = 0
Query:    7 RFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQYFKQPQYSKFITYPHSLAMLELLIKNPPFRKEIAFVGFRDFVHQQQFLHWQF 98
            RFELELEF+  LASP Y+H+LA  G L   +F+ FL YLQY+K+P+Y+K+I+YPH    L+LLI N PFR+E+A VGFR+FVH+QQF  WQ+
Sbjct:   28 RFELELEFLQSLASPAYVHHLATSGILQSPSFIAFLRYLQYWKRPEYAKYISYPHCFFFLDLLIHNEPFRREMANVGFRNFVHEQQFYSWQY 119          
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Match: A0A7S2EVA4_TRICV (Mediator of RNA polymerase II transcription subunit 31 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVA4_TRICV)

HSP 1 Score: 117 bits (292), Expect = 1.250e-30
Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 0
Query:    7 RFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQYFKQPQYSKFITYPHSLAMLELLIKNPPFRKEIAFVGFRDFVHQQQFLHWQFGKREPTSASASD 110
            RFELELEF+ CLASP Y+H+LA  G L D +FL FL YL+Y+  P+Y++F+ YPH L  L+LL ++  FR+E+A V FR+FVH+QQF  WQ   R      A+D
Sbjct:   39 RFELELEFVQCLASPAYMHHLATSGLLSDPSFLSFLRYLRYWSHPEYARFLVYPHCLYFLDLLCESEGFRREMANVAFRNFVHEQQFYGWQHRGRNLYGRGAAD 142          
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Match: A0A7S3QJ33_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ33_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.440e-30
Identity = 56/96 (58.33%), Postives = 74/96 (77.08%), Query Frame = 0
Query:    7 RFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQ-YFKQPQYSKFITYPHSLAMLELLIKNPPFRKEIAFVGFRDFVHQQQFLHWQFGKR 101
            RFELELEF+  LASP YLH+LA  G+  D AFL +L YL+ Y+ +P+Y+K+ITYPH L  L+L I+   FRKEI+ VGFR+FVH+QQF++WQ+  R
Sbjct:   77 RFELELEFVQSLASPAYLHHLATQGYFQDEAFLTYLRYLRSYWTRPEYAKYITYPHCLFFLDLAIEKEAFRKEISQVGFRNFVHEQQFMNWQYRSR 172          
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Match: A0A2P6TGR1_CHLSO (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TGR1_CHLSO)

HSP 1 Score: 111 bits (277), Expect = 2.000e-28
Identity = 50/94 (53.19%), Postives = 72/94 (76.60%), Query Frame = 0
Query:    7 RFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQYFKQPQYSKFITYPHSLAMLELLIKNPPFRKEIAFVGFRDFVHQQQFLHWQFGK 100
            RFELELEF++CLA+P YL++LAQ  + +D AFL +L+YL Y++QPQY++FI YPH+L  L+LL + P FR +IA   +++ VH QQF  WQ+ +
Sbjct:   22 RFELELEFLHCLANPGYLNWLAQNRYFEDEAFLEYLKYLLYWRQPQYARFIVYPHALYFLDLL-QTPEFRAKIANPAYKEMVHTQQFFFWQYAR 114          
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Match: A0A6V2LYR4_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2LYR4_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.370e-28
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = 0
Query:    7 RFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQYFKQPQYSKFITYPHSLAMLELLIKNPPFRKEIAFVGFRDFVHQQQFLHWQF 98
            RFELELEF+ CLASP YLH+LA+   L   +FL +     Y+K+P+Y +FI YPH L  L+L+++N  FR+E+  VGFR+FVH+QQF  WQF
Sbjct:   50 RFELELEFIQCLASPAYLHHLAESNVLSSPSFLSYXXXXXYWKRPEYVRFIIYPHCLYFLDLILENETFRREMGNVGFRNFVHEQQFYSWQF 141          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig841.19797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L203_9PHAE1.810e-5886.00Mediator of RNA polymerase II transcription subuni... [more]
D7FV80_ECTSI1.400e-4185.71Mediator of RNA polymerase II transcription subuni... [more]
A0A835Z5G5_9STRA1.320e-3759.22Mediator of RNA polymerase II transcription subuni... [more]
A0A7S3XZ41_HETAK6.750e-3659.79Mediator of RNA polymerase II transcription subuni... [more]
A0A6U6IBL1_9STRA1.480e-3563.16Mediator of RNA polymerase II transcription subuni... [more]
A0A7S2XM67_9STRA3.460e-3359.78Mediator of RNA polymerase II transcription subuni... [more]
A0A7S2EVA4_TRICV1.250e-3052.88Mediator of RNA polymerase II transcription subuni... [more]
A0A7S3QJ33_9STRA1.440e-3058.33Mediator of RNA polymerase II transcription subuni... [more]
A0A2P6TGR1_CHLSO2.000e-2853.19Mediator of RNA polymerase II transcription subuni... [more]
A0A6V2LYR4_9STRA3.370e-2854.35Mediator of RNA polymerase II transcription subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038089Mediator complex, subunit Med31 domain superfamilyGENE3D1.10.10.1340coord: 2..95
e-value: 2.4E-28
score: 99.5
IPR008831Mediator complex, subunit Med31PFAMPF05669Med31coord: 6..97
e-value: 3.1E-32
score: 110.4
IPR008831Mediator complex, subunit Med31PANTHERPTHR13186MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT SOH1coord: 6..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig841contigF-serratus_M_contig841:123593..131908 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig841.19797.1mRNA_F-serratus_M_contig841.19797.1Fucus serratus malemRNAF-serratus_M_contig841 123178..132087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig841.19797.1 ID=prot_F-serratus_M_contig841.19797.1|Name=mRNA_F-serratus_M_contig841.19797.1|organism=Fucus serratus male|type=polypeptide|length=149bp
MEGVGTRFELELEFMNCLASPEYLHYLAQGGFLDDSAFLRFLEYLQYFKQ
PQYSKFITYPHSLAMLELLIKNPPFRKEIAFVGFRDFVHQQQFLHWQFGK
REPTSASASDQGQQHSSSSSKHGRRTQTRQEPRYFRPEFVPGRVNNIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038089Med31_sf
IPR008831Mediator_Med31