prot_F-serratus_M_contig84.19779.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig84.19779.1
Unique Nameprot_F-serratus_M_contig84.19779.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length524
Homology
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A6H5JER8_9PHAE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER8_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 5.380e-56
Identity = 98/123 (79.67%), Postives = 109/123 (88.62%), Query Frame = 0
Query:  401 VLDPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKALAKGGTGCIMRSLVARQTV 523
            V DP AMGEVQQRE AVRG+LHRDP  ALR++LEDPP+ CKD AVK KS ECVLMVLTGVRED+I+ CLAGLSLDE D+LVKYVYKGLG+PRNNGPLFKWHAK L KGG GC+MR+LV+RQTV
Sbjct:  480 VSDPAAMGEVQQRETAVRGMLHRDPGGALRRSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGPLFKWHAKVLEKGGPGCVMRTLVSRQTV 602          
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: D8LCU1_ECTSI (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU1_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.230e-48
Identity = 87/105 (82.86%), Postives = 95/105 (90.48%), Query Frame = 0
Query:  401 VLDPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKAL 505
            V DP AMGEVQQRE AVRG+LHRDP  ALRK+LEDPPI CKD AVK KS+ECVLMVLTGVRED+I+ CLAGLSLDE D+LVKYVYKGLG+PRNNGPLFKWHAK+L
Sbjct:  253 VSDPAAMGEVQQRETAVRGMLHRDPGGALRKSLEDPPIFCKDEAVKAKSTECVLMVLTGVREDQIENCLAGLSLDEIDVLVKYVYKGLGMPRNNGPLFKWHAKSL 357          
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A835ZBW9_9STRA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW9_9STRA)

HSP 1 Score: 125 bits (314), Expect = 8.680e-31
Identity = 59/117 (50.43%), Postives = 84/117 (71.79%), Query Frame = 0
Query:  407 MGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKALAKGGTGCIMRSLVARQTV 523
            M  V +RE +VR LLH+D  AALRKALE+PP+  +D AVKDK+++ VL VL   ++ ++   +A LS +E+D L+KYVY+GL  P  NG LF+WHA  L +GG GC++R++  R+TV
Sbjct:    1 MAAVAERERSVRSLLHKDLTAALRKALENPPVGTRDKAVKDKNTDVVLDVLGAAKDAQLAPAVAALSAEESDALMKYVYRGLAKPAPNGALFRWHAAVLERGGVGCVVRAVADRRTV 117          
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A7S0JJE6_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJE6_9EUKA)

HSP 1 Score: 94.4 bits (233), Expect = 3.200e-19
Identity = 49/118 (41.53%), Postives = 72/118 (61.02%), Query Frame = 0
Query:  401 VLDPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNN---GPLFKWHAKALAKGGTGCIMR 515
            V D V +  ++ RE+++  LL  DP  AL  +L DPP Q K  AVKD S + V+  L G++E  I+  +A LSLD+ D+L+KY+Y GLG P+ +    PL KWH+  + + G   I+R
Sbjct:   17 VDDGVLLASIKTRESSINPLLRTDPVKALHISLTDPPYQTKTQAVKDASCDVVVKALLGIKEADIEGVVASLSLDQCDVLMKYLYCGLGQPKRDKQYAPLLKWHSFVVKRAGQASIVR 134          
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: H3GBG7_PHYRM (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBG7_PHYRM)

HSP 1 Score: 88.6 bits (218), Expect = 1.240e-16
Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 0
Query:  410 VQQRENAVRGLL-HRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKALAKGGTGCIMRSLVARQTV 523
            VQ R   V+GLL  R    A+R ALEDPP+Q K+ AVKD++++ V+  L    + ++   +  LS  + D L+KYV + LG+   +  + +WH K  AK G GCIMR+   R+ V
Sbjct:   80 VQARATQVQGLLAQRKNEEAVRAALEDPPLQSKNDAVKDENAKAVMAALLACNKGEMQRAIDSLSSVQEDSLMKYVMRFLGVASQSAAMLEWHQKLSAKAGAGCIMRAFTERKQV 194          
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A7S0Q3G7_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q3G7_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 1.250e-16
Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 0
Query:  403 DPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNG---PLFKWHAKALAKGGTGCIMRSLVARQTV 523
            D   +  ++ R++++  LL  DP  AL  +L DPP Q K  AVKD S + V   L  +++  ++  +A LSLD+ D+L+KY+Y GLG  + +    PL KWH   L + G   I+R +   Q V
Sbjct:   20 DNAMLAAIKARDSSIAPLLRTDPVRALHLSLADPPYQTKTQAVKDASCDVVCKALLAIKDADVEPAVAALSLDQCDVLMKYIYSGLGQTKKDKQYQPLLKWHGLVLKRAGQASIVRVISEVQRV 143          
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: L1JCW3_GUITC (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JCW3_GUITC)

HSP 1 Score: 86.3 bits (212), Expect = 1.360e-16
Identity = 49/111 (44.14%), Postives = 64/111 (57.66%), Query Frame = 0
Query:  410 VQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKALAKGGTGCIMRSLVAR 520
            +Q RE  V  LL R P+AAL+ AL DPP   K P V+  S + V+  + GV+E +I   +  LS +E D+L+KY+Y+GL        L KWHA    K G GCIMR L  R
Sbjct:   12 IQAREKQVLQLLSR-PSAALKAALTDPPYSAKSPDVRKSSMKVVVKAIQGVQEKEIAGVIDELSGEEQDVLMKYLYRGLEEVEACNSLLKWHAILTEKAGVGCIMRVLADR 121          
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A5A9P7X4_9TELE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9P7X4_9TELE)

HSP 1 Score: 87.0 bits (214), Expect = 1.580e-16
Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 0
Query:  414 ENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGP--LFKWHAKALAKGGTGCIMRSLVARQTV 523
            +N +R     D  AAL   L +PPI  K+PA+K+++   VL VLT  R   I+  +  L  +  DLL+KY+Y+G   P +N    L +WH KA A GG G I+R + AR+TV
Sbjct:   42 DNLIRQYPLLDMMAALHVGLRNPPINSKNPAIKERAQTLVLRVLTSFRSSDIESAVKSLDKNRLDLLMKYIYRGFEKPTDNSSAILLQWHEKAFAVGGLGSIVRVMTARKTV 153          
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A8C9TFI3_SCLFO (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9TFI3_SCLFO)

HSP 1 Score: 86.7 bits (213), Expect = 1.990e-16
Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 0
Query:  424 DPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGP--LFKWHAKALAKGGTGCIMRSLVARQTV 523
            D  AA   AL +PPI  K+PA+K+++   VL VLT  R  +I++ +  L  +  DLL+KY+Y+G   P  N    L +WH KA A GG G I+R L AR+TV
Sbjct:   49 DMMAAFHVALRNPPINTKNPAIKERAQAIVLKVLTSFRSSEIEQAVRSLDRNGVDLLMKYIYRGFEKPSENSSAILLQWHEKAFAVGGLGSIVRVLTARKTV 150          
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A0H5R263_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R263_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 2.760e-16
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 0
Query:  397 ARSDVLDPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKALAKGGTGCIMRSLV-ARQTV 523
            A S + D   + +++ +    R +L    A AL  A+  PP    D  VKD + + VL  +  +R++ +D  +  LSLD  DLL+KYVY+G  I  +   + KWHAK + + G G IMR L  ++QTV
Sbjct:    3 ATSGIYD---ISQMEMKVEETRSILKVGAAKALLHAMSAPPFSSPDQVVKDLARDAVLECILAIRDEDVDNVIGSLSLDNQDLLLKYVYRGFAIGDSCNAILKWHAKIVERNGIGSIMRVLTQSKQTV 127          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JER8_9PHAE5.380e-5679.67Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
D8LCU1_ECTSI1.230e-4882.86Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A835ZBW9_9STRA8.680e-3150.43Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A7S0JJE6_9EUKA3.200e-1941.53Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
H3GBG7_PHYRM1.240e-1640.00Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A7S0Q3G7_9EUKA1.250e-1636.29Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
L1JCW3_GUITC1.360e-1644.14Actin-related protein 2/3 complex subunit 5 n=2 Ta... [more]
A0A5A9P7X4_9TELE1.580e-1641.07Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A8C9TFI3_SCLFO1.990e-1644.12Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A0H5R263_9EUKA2.760e-1635.94Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036743Actin-related protein 2/3 complex subunit 5 superfamilyGENE3D1.25.40.190coord: 397..523
e-value: 6.3E-29
score: 103.0
IPR036743Actin-related protein 2/3 complex subunit 5 superfamilySUPERFAMILY69103Arp2/3 complex 16 kDa subunit ARPC5coord: 405..523
IPR006789Actin-related protein 2/3 complex subunit 5PFAMPF04699P16-Arccoord: 405..523
e-value: 9.8E-28
score: 97.5
IPR006789Actin-related protein 2/3 complex subunit 5PANTHERPTHR12644ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARCcoord: 406..523

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig84contigF-serratus_M_contig84:360148..364363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig84.19779.1mRNA_F-serratus_M_contig84.19779.1Fucus serratus malemRNAF-serratus_M_contig84 359156..364805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig84.19779.1 ID=prot_F-serratus_M_contig84.19779.1|Name=mRNA_F-serratus_M_contig84.19779.1|organism=Fucus serratus male|type=polypeptide|length=524bp
MSGPPPPPPKRGPPPIPSSAPPPTPPPPVPSRGPPPLPRGAPPPLPGGAP
PPIPSYGPPSIPSAPYRSPPPIPGGAPPPIPGGAPPPLPGVAPPPAANYG
RPELPRSSPLNHSLLNAPPPPPPPATQGYQPPLPPPATQGYQPPPPPPAT
QGYQPPPPPPASQIYQPPPPSVPVPPASQGYLPPTPAPPPYQYQPPPAPS
GGYQPPPPPPTASSTSRYAPPPPVAQRQPPPPTPMPPVSQGYHPPSQGYK
PPPPSIPSYTPPAHTPSPAPTVALRRVNQTHQPPPPAPSSETVPAYMRPG
LRSTFVAAPEPAPVSVPPPPPTSQPTQASYAAAPREYGGNSIGRGGYTVP
VSAQTPAAAQYPTPTPAQEYRAAVPSASQGYSPPPPPQPHPPTSFGARSD
VLDPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSS
ECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKW
HAKALAKGGTGCIMRSLVARQTV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036743ARPC5_sf
IPR006789ARPC5