prot_F-serratus_M_contig839.19761.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig839.19761.1
Unique Nameprot_F-serratus_M_contig839.19761.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length206
Homology
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Match: A0A6H5L7W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W2_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 2.750e-111
Identity = 162/192 (84.38%), Postives = 177/192 (92.19%), Query Frame = 0
Query:    1 VHKRQEKNPVLRHLRNVPFEITPGLLADFVLSPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWSLQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVLTLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEPL 192
            VHKRQEKN +LRHLRNV FEITPGL+ADFVL PK CAVFISLRYHLLYPHYLIQRIKELS HFTLRVLLCHVDV+DSE PLL+INK AV NDFT +LAWSLQEAARYLETYKAYE KSA+SIQEKV+DD+L KLQDCFGVVRSVNKSDVLTLASN  S +A+CDA+A EL+LCPGLG+KKV+RI+EALHEPL
Sbjct:   83 VHKRQEKNSMLRHLRNVAFEITPGLVADFVLGPKTCAVFISLRYHLLYPHYLIQRIKELSGHFTLRVLLCHVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVSRIHEALHEPL 274          
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Match: D7G4P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P9_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 8.930e-74
Identity = 115/145 (79.31%), Postives = 129/145 (88.97%), Query Frame = 0
Query:   48 YPHYLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWSLQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVLTLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEPL 192
            +PH  +Q   ELS HFTLRVLLCHVDV+DSE PLL+INK AV NDFT +LAWSLQEAARYLETYKAYE KSA+SIQEKV+DD+L KLQDCFGVVRSVNKSDVLTLASN  S +A+CDA+A EL+LCPGLG+KKVARI+EALHEPL
Sbjct:    5 HPHIFMQ---ELSGHFTLRVLLCHVDVDDSETPLLEINKMAVFNDFTLVLAWSLQEAARYLETYKAYEHKSADSIQEKVDDDFLGKLQDCFGVVRSVNKSDVLTLASNFGSLKAVCDATAGELSLCPGLGEKKVARIHEALHEPL 146          
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Match: A0A835ZCX2_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCX2_9STRA)

HSP 1 Score: 207 bits (527), Expect = 4.150e-64
Identity = 101/178 (56.74%), Postives = 132/178 (74.16%), Query Frame = 0
Query:   14 LRNVPFEITPGLLADFVLSPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWSLQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVLTLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEP 191
            +RNV +E   G++ DFV+SP ACA+F+S+RYH L P Y+ QRI+EL   F LR+LL  VD +D+   LL++NK AV  +FT +LAWS  EAARYLET+KA+E K   SIQEKVN DYLAK QD    V +VN++DV+TL S   S + +C+AS EE+ALCPGLGDKKV  +++ALH+P
Sbjct:    7 IRNVEYEFATGIMPDFVISPTACALFLSMRYHQLKPTYIAQRIEELRTSFRLRLLLVLVDQDDNVNLLLELNKMAVARNFTLLLAWSWPEAARYLETFKAFENKPPTSIQEKVNSDYLAKAQDALCTVHAVNRTDVVTLLSTFGSLQGLCEASMEEMALCPGLGDKKVVALHDALHQP 184          
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Match: A0A1D1ZHX7_9ARAE (DNA excision repair protein ERCC-1 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1ZHX7_9ARAE)

HSP 1 Score: 207 bits (527), Expect = 2.130e-63
Identity = 98/195 (50.26%), Postives = 141/195 (72.31%), Query Frame = 0
Query:    1 VHKRQEKNPVLRHLRNVPFEITPGLLADFVLSPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWSLQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVLTLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEPLSLT 195
            V  RQ+ NP+L+H+RNV +     ++ D++L   +CA++ISLRYHLL+P Y+  RI+EL ++F LRV+LCH+DVED  KPLL++ +TA+L+D + +  WSL+E  RYLET K YE KSA+SI+E+++ DYL++L      +R VNK+DV+TL S   S   + DAS EELA CPG+G++KV R+Y+  HEP   T
Sbjct:   18 VSHRQKGNPLLKHIRNVRWTFA-DVVCDYLLGQNSCALYISLRYHLLHPDYVYYRIRELQKNFKLRVVLCHIDVEDVAKPLLEVTRTALLHDCSLLCGWSLEECGRYLETIKVYENKSADSIREQMDTDYLSRLTHALTTIRHVNKTDVVTLGSAFGSLSRIMDASMEELARCPGIGERKVQRLYDTFHEPFRRT 211          
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Match: A0A835LMH1_9MAGN (Uncharacterized protein n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LMH1_9MAGN)

HSP 1 Score: 209 bits (531), Expect = 6.220e-63
Identity = 99/191 (51.83%), Postives = 140/191 (73.30%), Query Frame = 0
Query:    1 VHKRQEKNPVLRHLRNVPFEITPGLLADFVLSPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWSLQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVLTLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEP 191
            V  RQ+ NP+L+H+RNV + +   ++ D++L   +CA+++SLRYHLL+P YL  RIKEL ++F LRV+LCHVDVED  KP+L++ KTA+L+D T + AWSL+E  RYLET K YE K A+ +Q +++ DYL++L      VR VNK+DV+TL SN  S   + D+S E+LA CPG+G+KKV R+Y+  HEP
Sbjct:  103 VSHRQKGNPLLKHIRNVKW-LFADIICDYLLGQNSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPILEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADILQGQMDTDYLSRLNHALTAVRRVNKTDVVTLGSNFGSLSRIMDSSMEDLARCPGIGEKKVKRLYDTFHEP 292          
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Match: A0A5J4Y633_9CHLO (DNA excision repair ERCC-1-like (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y633_9CHLO)

HSP 1 Score: 205 bits (521), Expect = 1.040e-62
Identity = 102/200 (51.00%), Postives = 138/200 (69.00%), Query Frame = 0
Query:    1 VHKRQEKNPVLRHLRNVPFEITPGLLADFVLSPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWSLQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVLTLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEPLSLTQRKKR 200
            V KRQE NPVL+H+RNV ++    ++ D+ L   ACAVF+SLR+HLL P Y+  RIKEL R F LR+L+CH+DVED  +PL  + K A+LN+ T I  WS +E ARYLETYK+YE K A++IQ + ++DY+++L      VR VNK+DVLTL +  ++   +  AS EELA CPGLG  KV R++E  HEP     R++R
Sbjct:   17 VSKRQEGNPVLKHIRNVRWQFA-DIIPDYQLGQNACAVFLSLRFHLLKPEYVHHRIKELQRSFRLRLLICHIDVEDVVEPLAQVIKAALLNEVTLICGWSPEECARYLETYKSYETKPADAIQGRTDEDYISRLNSALTTVRGVNKTDVLTLGATFKTVTNIMQASMEELAACPGLGPTKVKRLHETFHEPFRKVVRQQR 215          
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Match: A0A6J0NQ48_RAPSA (DNA excision repair protein ERCC-1 n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0NQ48_RAPSA)

HSP 1 Score: 208 bits (530), Expect = 1.680e-62
Identity = 102/191 (53.40%), Postives = 139/191 (72.77%), Query Frame = 0
Query:    1 VHKRQEKNPVLRHLRNVPFEITPGLLADFVLSPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWSLQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVLTLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEP 191
            V  RQ+ NP+L+H+RNV + +   ++ D++L    CA+++SLRYHLL+P YL  RI+EL R+F LRV+LCHVDVEDS KPLL++ KTA+L+D T + AWSL E ARYLET K YE K A+ IQ +++ DYL++L      +R VNKSDV+TL S   S   + DAS E+LA CPG+G++KV R+Y+  HEP
Sbjct:  128 VSNRQKGNPLLKHIRNVKW-VYSDIIPDYLLGQTTCALYLSLRYHLLHPDYLYFRIRELQRNFKLRVVLCHVDVEDSVKPLLEVTKTALLHDCTLLCAWSLTECARYLETIKVYENKPADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIMDASMEDLARCPGIGERKVKRLYDTFHEP 317          
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Match: A0A1R3J334_9ROSI (DNA repair protein rad10 n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3J334_9ROSI)

HSP 1 Score: 206 bits (524), Expect = 1.700e-62
Identity = 98/191 (51.31%), Postives = 139/191 (72.77%), Query Frame = 0
Query:    1 VHKRQEKNPVLRHLRNVPFEITPGLLADFVLSPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWSLQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVLTLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEP 191
            V  RQ+ NP+L+H+RNV +     ++ D++LS  +CA+++SLRYHLL+P YL  RI+EL ++F LRV+LCHVDVED  KPLL++ KTA+L+D T +  WSL+E  RYLET K YE K A+ IQ +++ DYL++L      VR VNK+DV+T+ S   S  ++ DAS E+LA CPG+G++KV R+Y+  HEP
Sbjct:   62 VSHRQKGNPLLKHIRNVRWAFA-DIVCDYLLSQSSCALYLSLRYHLLHPDYLYYRIRELEKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCGWSLEECGRYLETIKVYENKPADLIQGQMDTDYLSRLNHALTTVRHVNKTDVVTIGSTFGSLSSIMDASMEDLARCPGIGERKVKRLYDTFHEP 251          
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Match: A0A3S4NRY1_9MAGN (DNA excision repair protein ERCC-1 isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4NRY1_9MAGN)

HSP 1 Score: 207 bits (526), Expect = 2.480e-62
Identity = 100/191 (52.36%), Postives = 139/191 (72.77%), Query Frame = 0
Query:    1 VHKRQEKNPVLRHLRNVPFEITPGLLADFVLSPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWSLQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVLTLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEP 191
            V  RQ+ NP+L+H+RNV +     +L D++L   +CA+++SLRYHLL+P YL  RI+EL ++F LRV+LCHVDVED  KPLL++ +TA+L+D T +  WSL+E  RYLET K YE K A+SIQE+++ DYL++L      VR VNK+DV+TL S   S   + DAS E+LA CPG+G++KV R+Y+  HEP
Sbjct:  107 VSHRQKGNPLLKHIRNVRWMFA-DVLCDYLLGQGSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTRTALLHDCTLLCGWSLEECGRYLETIKVYENKPADSIQERMDTDYLSRLTHALTAVRHVNKTDVVTLGSTFGSLSHIMDASMEDLARCPGIGERKVKRLYDTFHEP 296          
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Match: A0A022QX06_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QX06_ERYGU)

HSP 1 Score: 207 bits (526), Expect = 2.980e-62
Identity = 100/191 (52.36%), Postives = 140/191 (73.30%), Query Frame = 0
Query:    1 VHKRQEKNPVLRHLRNVPFEITPGLLADFVLSPKACAVFISLRYHLLYPHYLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWSLQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVLTLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEP 191
            V  RQ+ NP+L+H+RNV +     ++ D++L   +CA+++SLRYHLL+P YL  RI+EL ++F LRV+LCHVDVED  KPLL++ KTA+L+D T + AWSL+E  RYLET K YE KSAE IQ +++ DYL++L +    VR VNK+DV+TL S   S   + DAS ++LA CPG+G++KV R+Y+  HEP
Sbjct:  103 VSNRQKGNPLLKHIRNVRWAFA-DIVCDYLLGQNSCALYLSLRYHLLHPDYLYFRIRELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKSAELIQGQMDMDYLSRLNNALTSVRHVNKTDVVTLGSTFGSLSNIMDASVDDLARCPGIGERKVKRLYDTFHEP 292          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig839.19761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7W2_9PHAE2.750e-11184.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4P9_ECTSI8.930e-7479.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZCX2_9STRA4.150e-6456.74Restriction endonuclease type II-like protein n=1 ... [more]
A0A1D1ZHX7_9ARAE2.130e-6350.26DNA excision repair protein ERCC-1 n=1 Tax=Anthuri... [more]
A0A835LMH1_9MAGN6.220e-6351.83Uncharacterized protein n=2 Tax=Coptis chinensis T... [more]
A0A5J4Y633_9CHLO1.040e-6251.00DNA excision repair ERCC-1-like (Fragment) n=1 Tax... [more]
A0A6J0NQ48_RAPSA1.680e-6253.40DNA excision repair protein ERCC-1 n=1 Tax=Raphanu... [more]
A0A1R3J334_9ROSI1.700e-6251.31DNA repair protein rad10 n=2 Tax=Corchorus TaxID=9... [more]
A0A3S4NRY1_9MAGN2.480e-6252.36DNA excision repair protein ERCC-1 isoform X1 n=1 ... [more]
A0A022QX06_ERYGU2.980e-6252.36Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14520HHH_5coord: 143..189
e-value: 5.4E-7
score: 30.1
NoneNo IPR availableGENE3D1.10.150.20coord: 114..204
e-value: 1.6E-25
score: 90.5
NoneNo IPR availableGENE3D3.40.50.10130coord: 1..113
e-value: 1.3E-41
score: 142.9
NoneNo IPR availablePRODOMPD013585coord: 1..122
e-value: 2.0E-32
score: 346.0
IPR004579ERCC1/RAD10/SWI10 familyTIGRFAMTIGR00597TIGR00597coord: 1..109
e-value: 2.8E-36
score: 121.8
IPR004579ERCC1/RAD10/SWI10 familyPFAMPF03834Rad10coord: 1..112
e-value: 1.5E-38
score: 131.3
IPR004579ERCC1/RAD10/SWI10 familyPANTHERPTHR12749EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1coord: 1..201
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 1..125
IPR010994RuvA domain 2-likeSUPERFAMILY47781RuvA domain 2-likecoord: 88..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig839contigF-serratus_M_contig839:92031..93222 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig839.19761.1mRNA_F-serratus_M_contig839.19761.1Fucus serratus malemRNAF-serratus_M_contig839 92031..93222 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig839.19761.1 ID=prot_F-serratus_M_contig839.19761.1|Name=mRNA_F-serratus_M_contig839.19761.1|organism=Fucus serratus male|type=polypeptide|length=206bp
VHKRQEKNPVLRHLRNVPFEITPGLLADFVLSPKACAVFISLRYHLLYPH
YLIQRIKELSRHFTLRVLLCHVDVEDSEKPLLDINKTAVLNDFTFILAWS
LQEAARYLETYKAYEQKSAESIQEKVNDDYLAKLQDCFGVVRSVNKSDVL
TLASNLRSFEAMCDASAEELALCPGLGDKKVARIYEALHEPLSLTQRKKR
SRQET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004579ERCC1/RAD10/SWI10
IPR011335Restrct_endonuc-II-like
IPR010994RuvA_2-like