prot_F-serratus_M_contig837.19750.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig837.19750.1
Unique Nameprot_F-serratus_M_contig837.19750.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length315
Homology
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BLAST of mRNA_F-serratus_M_contig837.19750.1 vs. uniprot
Match: A0A6H5JK81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK81_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 1.080e-82
Identity = 160/280 (57.14%), Postives = 183/280 (65.36%), Query Frame = 0 
Query:    4 GAPPRLPRINLGSKKLQF-MKRDTRRDLLIEACEWGDLEALKQLLDLGASPLDAYSTINTNLAGSRCVLGEFFLFLLQVGAGLRPRLAANDCLHDQVLHELIRARLEKDPDFLSKKDLRDPDE-RGFCLLHHTAVFGDVGKAEFLLQRGVDPDVRASGGQETALIVAARKGGRGQMRVADALLRAGADLSAADSKGMMALHHAVDTGRTPMCRYLLLAGAKRSAQDVSGRTPFDLCRETHPRTYEVLRGFAPLRPPPRVILDYMEKVEVRGLGNAASLQQ 281
            G   R+ +INLGSKK Q  M    R  LLI ACEWGDLEAL++LL+LGASPLD YS    ++ GSRCV  +FFLFLLQVGAGLR RLA +D LHD+ L  LI+  LEK+  FLS   LRD DE RGFCL+HH A FG+  K EFLLQRGVDPDVRA GG ETAL+VAAR+G R  + VA AL++AGAD  A D  G   LHHA   GR  MC YLLL                D CR  HPR + V++ F   RPPP  ILDYMEKVEV G      L+Q
Sbjct: 1238 GNTQRVHKINLGSKKDQMTMTHADRTALLIGACEWGDLEALQRLLELGASPLDLYSP---SVEGSRCVFCQFFLFLLQVGAGLRSRLAMDDSLHDRALSMLIQPSLEKNRRFLSGPQLRDQDEGRGFCLVHHAAAFGNANKVEFLLQRGVDPDVRARGGDETALMVAARRGQRPHLEVAAALIKAGADKLARDRSGRTPLHHAASAGRKHMCHYLLLVXXXXXXXXXXXXXXMDACRTGHPRAFAVMQSFISRRPPPATILDYMEKVEVHGHAQEVLLRQ 1514
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BLAST of mRNA_F-serratus_M_contig837.19750.1 vs. uniprot
Match: D8LI60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI60_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 1.540e-80
Identity = 155/271 (57.20%), Postives = 179/271 (66.05%), Query Frame = 0 
Query:    4 GAPPRLPRINLGSKKLQF-MKRDTRRDLLIEACEWGDLEALKQLLDLGASPLDAYSTINTNLAGSRCVLGEFFLFLLQVGAGLRPRLAANDCLHDQVLHELIRARLEKDPDFLSKKDLRDPDE-RGFCLLHHTAVFGDVGKAEFLLQRGVDPDVRASGGQETALIVAARKGGRGQMRVADALLRAGADLSAADSKGMMALHHAVDTGRTPMCRYLLLAGAKRSAQDVSGRTPFDLCRETHPRTYEVLRGFAPLRPPPRVILDYMEKVEVRG 272
            G   R+ +INLGSKK Q  M    R  LLI ACEWGDLEAL++LL+LGASPLD YS    ++  SRCV  +FFLFLLQVGAGLR RLA +D LHD+ L  LI+  LE++  FLSK  LRD D  RGFCL+HH A FG+  K EFLLQRGVDPD RA GG ETAL+VAAR+G R  +RVA AL++AGA+  A D  G   LHHA   GR  MC YLLL                D CR  HPR + V++ F   RPPP  ILDYMEKVEV G
Sbjct:  962 GNTQRVHKINLGSKKDQMTMTHADRTALLIGACEWGDLEALQRLLELGASPLDLYSP---SVEESRCVFCQFFLFLLQVGAGLRSRLAPDDSLHDRALSMLIQPSLEENRRFLSKPQLRDQDVGRGFCLVHHAAAFGNANKVEFLLQRGVDPDARARGGDETALMVAARRGKRTHLRVAAALIKAGANKLARDRSGRTPLHHAASAGRKHMCHYLLLVXXXXXXXXXXXXXXMDACRAEHPRAFAVMQSFVSRRPPPATILDYMEKVEVHG 1229
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BLAST of mRNA_F-serratus_M_contig837.19750.1 vs. uniprot
Match: A0A8M1KCL1_CLUHA (rabankyrin-5 n=3 Tax=Clupeidae TaxID=55118 RepID=A0A8M1KCL1_CLUHA)

HSP 1 Score: 55.5 bits (132), Expect = 8.270e-5
Identity = 46/153 (30.07%), Postives = 74/153 (48.37%), Query Frame = 0 
Query:   75 FLFLLQVGAGLRPRLAANDCLHDQVLHELIRARLEKDPDFL--SKKDLRDPDERGFCLLHHTAVFGDVGKAEFLLQRGVDPDVRASGGQETALIVAA--------RKGGRGQMRVADALLRAGADLSAADSKGMMALHHAVDTGRTPMCRYLL 217
            FL+L+++ + L  +L   D   D  L   +  +LE     L  +K D+   D+ G+ LLH     GD   + FL++     +    G  ET L +           +  +G  R+A+ALL+AGA+ +  +SKG   LH AV +G  P+ + LL
Sbjct:  240 FLYLIEMDSQLPAKLNELDNNGDLALDLALSRKLESIATTLVNNKADVDMVDQSGWSLLHKAIQRGDEFASIFLIRHSAQVNAATVGAVETPLHLVCSFSPKKHNEEVMKGMARIAEALLKAGANANMQNSKGRTPLHEAVVSGNEPVFKQLL 392
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig837.19750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JK81_9PHAE1.080e-8257.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI60_ECTSI1.540e-8057.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8M1KCL1_CLUHA8.270e-530.07rabankyrin-5 n=3 Tax=Clupeidae TaxID=55118 RepID=A... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 26..55
e-value: 4.1
score: 16.4
coord: 160..192
e-value: 1.5
score: 17.8
coord: 196..225
e-value: 1.2
score: 18.2
coord: 126..155
e-value: 120.0
score: 11.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 196..228
score: 9.778
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 160..195
score: 9.19
NoneNo IPR availablePFAMPF13857Ank_5coord: 183..237
e-value: 2.6E-8
score: 34.0
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 117..172
coord: 123..239
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 14..247
e-value: 1.5E-32
score: 114.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 28..240
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 126..236
score: 25.461

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig837contigF-serratus_M_contig837:120142..134180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig837.19750.1mRNA_F-serratus_M_contig837.19750.1Fucus serratus malemRNAF-serratus_M_contig837 120142..134181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig837.19750.1 ID=prot_F-serratus_M_contig837.19750.1|Name=mRNA_F-serratus_M_contig837.19750.1|organism=Fucus serratus male|type=polypeptide|length=315bp
RTRGAPPRLPRINLGSKKLQFMKRDTRRDLLIEACEWGDLEALKQLLDLG
ASPLDAYSTINTNLAGSRCVLGEFFLFLLQVGAGLRPRLAANDCLHDQVL
HELIRARLEKDPDFLSKKDLRDPDERGFCLLHHTAVFGDVGKAEFLLQRG
VDPDVRASGGQETALIVAARKGGRGQMRVADALLRAGADLSAADSKGMMA
LHHAVDTGRTPMCRYLLLAGAKRSAQDVSGRTPFDLCRETHPRTYEVLRG
FAPLRPPPRVILDYMEKVEVRGLGNAASLQQATTSRGCIGSILEGKIRYT
LAHRRKCGGWFGRRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom