prot_F-serratus_M_contig836.19739.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig836.19739.1
Unique Nameprot_F-serratus_M_contig836.19739.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length131
Homology
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Match: A0A0V0IXE8_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0IXE8_SOLCH)

HSP 1 Score: 91.7 bits (226), Expect = 5.720e-19
Identity = 42/116 (36.21%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    1 ALKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRFVTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYLQADIGENIYIELPKDY 116
            A+K EI    +N  W  V  P++K  +G +  +K K   DG++E++K R V +     +G  YHE  SP+   S++RAV+S AA+KGW+   +DV   +LQ D+ E +Y+ +P+ +
Sbjct:  460 AMKNEIQALEDNKTWEIVTLPQEKKAIGCRWVYKIKYKADGEVERFKARLVAKGYSQKEGLDYHETFSPVVRMSTVRAVISVAAIKGWKLYQMDVYNAFLQGDLYEEVYMNIPEGF 575          
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Match: A0A2K3JS97_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JS97_TRIPR)

HSP 1 Score: 87.0 bits (214), Expect = 1.570e-18
Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = 0
Query:    1 ALKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRFVTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYLQADIGENIYIELPKDY-RAFSNAVGLLRKATY 131
            A+  E++    N  W+ V  P  K  +G K  +K K   +G IE+YK R V Q    ++G  Y +  SP+   +++R +LS AA+KGW    +DV   +L  D+ E++Y+ LP  Y    S+ V  L K+ Y
Sbjct:   79 AMATELHALAKNNTWSVVSLPPGKVPIGCKWVYKVKYHANGSIERYKARLVAQGYTQMEGVDYFDTFSPVAKLTTVRVLLSLAAIKGWHLEQLDVNNAFLHGDLHEDVYMVLPPGYPTTHSSQVCKLNKSLY 210          
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE)

HSP 1 Score: 85.9 bits (211), Expect = 2.140e-18
Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 0
Query:    1 ALKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRFVTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYLQADIGENIYIELPKDYRAF--------SNAVGLLRKATY 131
            A+  E N    N  WT V+RP+ KTV+G++  F+ K+  DG +E+ K R V +    + G HY+E  + +   SS+R V++ AA +  E   +D    YL  +I E IY+E+PK+             N V  ++KA Y
Sbjct:   35 AMLEEYNSLEKNKTWTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAAERNLELEQLDFTCAYLNGEIEEEIYMEVPKEIETILGRKTQDRENKVSRIQKALY 173          
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Match: A0A2G2YGH0_CAPAN (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2YGH0_CAPAN)

HSP 1 Score: 83.6 bits (205), Expect = 5.500e-18
Identity = 38/116 (32.76%), Postives = 64/116 (55.17%), Query Frame = 0
Query:    2 LKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRFVTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYLQADIGENIYIELPKDYR 117
            +  E+     N  W  V+ PK K  +G+K  +K K   +G++E++K R V +     +G  YHE  SP+    ++R  ++ AA +GW    +DV   +LQ D+ E +YIE+P+ +R
Sbjct:    1 MTSEVQALEANNTWVIVDLPKGKNTVGSKWIYKIKYLSNGEVERFKERLVAKGYSQQEGLDYHETFSPVAKMVTVRCTITLAASQGWNLYQMDVHNAFLQGDLEEEVYIEIPEGFR 116          
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Match: A0A2P6Q6C4_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6Q6C4_ROSCH)

HSP 1 Score: 88.6 bits (218), Expect = 7.140e-18
Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 0
Query:    1 ALKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRFVTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYLQADIGENIYIELPKDY-RAFSNAVGLLRKATY 131
            A+ +EI     N  W+ V  P DK  +G K  +K K   DG +E+YK R V +    V G  Y E  +P+   +++R +LS AA++GW    +DV   +L  D+ E++Y++LP  + R   N V  L K+ Y
Sbjct:  604 AMDKEIQALQENKTWSLVPLPPDKKPIGCKWVYKIKHNPDGTVERYKARLVAKGYSQVAGIDYRETFAPVAKLTTVRVLLSLAALQGWHLHQLDVNNAFLNGDLYEDVYMKLPPGFGRKGENRVCKLHKSVY 735          
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Match: A0A6A3AWP1_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AWP1_HIBSY)

HSP 1 Score: 88.2 bits (217), Expect = 9.950e-18
Identity = 46/135 (34.07%), Postives = 67/135 (49.63%), Query Frame = 0
Query:    1 ALKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRFVTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYLQADIGENIYIELPKDYRAFSNA----VGLLRKATY 131
            A+  E     NNG WT V  PKD+ V+G K  F+ K   DG + +YK R V +    V G  + +  SP+   S+   VL+ A   GWE RHID+   +L  D+ E ++++ P  +          V  L+KA Y
Sbjct: 1034 AVHEEYKALTNNGTWTLVRLPKDRMVVGCKWLFRVKRNPDGSVNRYKARLVAKGFSQVPGQDFKDTFSPVVRFSTFNTVLAVAVSNGWEIRHIDINNAFLNGDLSEEVFMQQPPGFEQEDECNRPLVCKLKKALY 1168          
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Match: A0A1E1KFU7_9HELO (Uncharacterized protein n=1 Tax=Rhynchosporium commune TaxID=914237 RepID=A0A1E1KFU7_9HELO)

HSP 1 Score: 87.8 bits (216), Expect = 1.290e-17
Identity = 42/116 (36.21%), Postives = 65/116 (56.03%), Query Frame = 0
Query:    1 ALKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRFVTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYLQADIGENIYIELPKDY 116
            A++ E N  + N  W  V  PKD+  L TK  F++K+G +G+I +YK R V +  + ++GF + E  S +  A+S R + +  A+ GW    ID+   +L  DI E IYI  P+ Y
Sbjct:  301 AIEAEYNSLLQNRTWKVVRMPKDRKPLTTKWTFRKKLGGEGEITRYKARMVARGFQQIEGFDFTETYSNVVKAASYRILFAMTALYGWHCYQIDITTAFLNGDIDEEIYIRAPEGY 416          
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Match: UPI001004D57F (LOW QUALITY PROTEIN: uncharacterized protein LOC107027889 n=1 Tax=Solanum pennellii TaxID=28526 RepID=UPI001004D57F)

HSP 1 Score: 87.8 bits (216), Expect = 1.350e-17
Identity = 45/132 (34.09%), Postives = 73/132 (55.30%), Query Frame = 0
Query:    1 ALKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRFVTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYLQADIGENIYIELPKDYRA-FSNAVGLLRKATY 131
            A+++EI     N  W+ V+ PK    +G+K  +K K   DGQ+E++K R V +     +G  YH+  SP+    ++R V++ A  KGW    +DV   +LQ D+ E +Y+E+P+ +R    N V  L K+ Y
Sbjct:  962 AMQQEIQALEENNTWSIVDLPKGMHTVGSKWIYKIKYKADGQVERFKARLVAKGYSQQEGLDYHDTFSPVAKMVTVRCVIALAVSKGWPMYQMDVYNAFLQGDLEEEVYMEMPEGFRKPGENKVCKLLKSLY 1093          
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Match: A0A061FAW7_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061FAW7_THECC)

HSP 1 Score: 83.6 bits (205), Expect = 1.870e-17
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 0
Query:    2 LKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRFVTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYLQADIGENIYIELPKDY 116
            +K +I    NNG W+ +  PK    +G K  +K K+     +EKYK R V +    ++GF YHE  SP+   +++R  L+  A+KGW    +D++  +L  D+ E IY++LP  Y
Sbjct:    1 MKSKIKALENNGTWSIISFPKYAHSIGCKWVYKVKLKAYRSLEKYKARLVAKGHSQLEGFDYHETFSPVAKQATVRTCLAHVAIKGWVLSQLDIDIAFLNGDLEETIYMDLPLSY 115          
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Match: A0A151SYP7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SYP7_CAJCA)

HSP 1 Score: 82.8 bits (203), Expect = 2.120e-17
Identity = 40/123 (32.52%), Postives = 64/123 (52.03%), Query Frame = 0
Query:    1 ALKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRFVTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYLQADIGENIYIELPKDYRAFSNAV 123
            A+K+E N  +NNG WT V  P +KT +G K  F+ K   DG + KYK R V +      G  Y+E  SP+    ++R +L+ A    W  + +DV   +L  ++ E +Y+  P  + +   A+
Sbjct:   40 AMKQEYNALLNNGTWTLVSLPPNKTAIGCKWVFRIKENLDGTVNKYKARLVAKGFHQQFGSDYNETFSPVVKPVTIRLILTLALTHHWSIQQLDVNNAFLNDNLQEEVYMSQPPGFESSDKAL 162          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig836.19739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0V0IXE8_SOLCH5.720e-1936.21Putative ovule protein (Fragment) n=1 Tax=Solanum ... [more]
A0A2K3JS97_TRIPR1.570e-1834.09Retrovirus-related Pol polyprotein from transposon... [more]
A0A0A9Y7J8_LYGHE2.140e-1833.81Retrovirus-related Pol polyprotein from transposon... [more]
A0A2G2YGH0_CAPAN5.500e-1832.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P6Q6C4_ROSCH7.140e-1834.85Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]
A0A6A3AWP1_HIBSY9.950e-1834.07Integrase catalytic domain-containing protein n=1 ... [more]
A0A1E1KFU7_9HELO1.290e-1736.21Uncharacterized protein n=1 Tax=Rhynchosporium com... [more]
UPI001004D57F1.350e-1734.09LOW QUALITY PROTEIN: uncharacterized protein LOC10... [more]
A0A061FAW7_THECC1.870e-1734.78Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A151SYP7_CAJCA2.120e-1732.52Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 14..123
e-value: 4.3E-17
score: 62.6
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 14..123
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 14..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig836contigF-serratus_M_contig836:112679..113071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig836.19739.1mRNA_F-serratus_M_contig836.19739.1Fucus serratus malemRNAF-serratus_M_contig836 112679..113071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig836.19739.1 ID=prot_F-serratus_M_contig836.19739.1|Name=mRNA_F-serratus_M_contig836.19739.1|organism=Fucus serratus male|type=polypeptide|length=131bp
ALKREINGQINNGVWTQVERPKDKTVLGTKTPFKRKVGKDGQIEKYKYRF
VTQRCRPVKGFHYHELSSPIPTASSMRAVLSTAAVKGWEHRHIDVEQVYL
QADIGENIYIELPKDYRAFSNAVGLLRKATY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like