prot_F-serratus_M_contig83.19685.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig83.19685.1
Unique Nameprot_F-serratus_M_contig83.19685.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length151
Homology
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A5N6P275_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P275_9ASTR)

HSP 1 Score: 129 bits (323), Expect = 2.810e-32
Identity = 69/152 (45.39%), Postives = 97/152 (63.82%), Query Frame = 0
Query:    2 SSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGR---LQKAMYGLMHAGLLW 150
            SSE PQW+ A+K E+D  +    W++VD P G   LG + IFKRK+  DG ++KYK R V KGFRQ +G+ Y +S SP    +SIR+ LA+ A  + E  Q+DV+ AFL  D+ EE+Y+E P+G+  +P Q G+   L K++YGL  A   W
Sbjct:  294 SSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDSYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGF-SAPGQEGKVCKLVKSLYGLKQAPKQW 444          
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A2N9GD92_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GD92_FAGSY)

HSP 1 Score: 129 bits (325), Expect = 5.820e-32
Identity = 65/153 (42.48%), Postives = 96/153 (62.75%), Query Frame = 0
Query:    1 MSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP---NQVGRLQKAMYGLMHAGLLW 150
            ++S  P W+ A+K E+D  +  G W +VD P GK+ +G K ++K K   DG V++YK R VAKGF Q  GI Y+E+ +P    SS+R  +AV A   W   Q+DV+ AFL  ++TEE+Y++LP G+   P   ++V RL++A+YGL  A   W
Sbjct:  844 LASSDPLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSHKVCRLRRALYGLKQAPRAW 996          
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: UPI000D464853 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI000D464853)

HSP 1 Score: 124 bits (310), Expect = 7.130e-32
Identity = 62/145 (42.76%), Postives = 92/145 (63.45%), Query Frame = 0
Query:    7 QWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP-NQVGRLQKAMYGLMHAGLLW 150
            +W  A+K E+D      VW +VD P+G   +G K +FK+K+G DG+VE YK R VAKGFRQ +GI Y+E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   + E +++E P G+     ++V +L++++YGL  A   W
Sbjct:   74 KWIDAMKSEIDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGYIEENIFMEQPRGFESQDGSKVCKLKRSIYGLKQASRSW 218          
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A2N9J752_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J752_FAGSY)

HSP 1 Score: 129 bits (324), Expect = 7.870e-32
Identity = 65/153 (42.48%), Postives = 95/153 (62.09%), Query Frame = 0
Query:    1 MSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPN---QVGRLQKAMYGLMHAGLLW 150
            ++S  P W+ A+K E+D  +  G W +VD P GK+ +G K ++K K   DG V++YK R VAKGF Q  GI Y+E+ +P    SS+R  +AV A   W   Q+DV+ AFL  ++TEE+Y++LP G+   P    +V RL++A+YGL  A   W
Sbjct:  558 LASSDPLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSPKVCRLRRALYGLKQAPRAW 710          
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A2N9FVQ5_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FVQ5_FAGSY)

HSP 1 Score: 129 bits (323), Expect = 1.020e-31
Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 0
Query:    6 PQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP---NQVGRLQKAMYGLMHAGLLW 150
            P W+ A+K E+D  +  G W +VD P GK+ +G K ++K K   DG V++YK R VAKGF Q  GI Y+E+ +P    SS+R  +AV A   W   Q+DV+ AFL  ++TEE+Y++LP G+   P   ++V RL++A+YGL  A   W
Sbjct:  291 PLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSHKVCRLRRALYGLKQAPRAW 438          
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A2N9HJ90_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HJ90_FAGSY)

HSP 1 Score: 129 bits (323), Expect = 1.070e-31
Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 0
Query:    6 PQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP---NQVGRLQKAMYGLMHAGLLW 150
            P W+ A+K E+D  +  G W +VD P GK+ +G K ++K K   DG V++YK R VAKGF Q  GI Y+E+ +P    SS+R  +AV A   W   Q+DV+ AFL  ++TEE+Y++LP G+   P   ++V RL++A+YGL  A   W
Sbjct:  535 PLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSHKVCRLRRALYGLKQAPRAW 682          
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A2N9HNF3_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HNF3_FAGSY)

HSP 1 Score: 129 bits (323), Expect = 1.070e-31
Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 0
Query:    6 PQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP---NQVGRLQKAMYGLMHAGLLW 150
            P W+ A+K E+D  +  G W +VD P GK+ +G K ++K K   DG V++YK R VAKGF Q  GI Y+E+ +P    SS+R  +AV A   W   Q+DV+ AFL  ++TEE+Y++LP G+   P   ++V RL++A+YGL  A   W
Sbjct:  590 PLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSHKVCRLRRALYGLKQAPRAW 737          
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A2N9FF82_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FF82_FAGSY)

HSP 1 Score: 129 bits (323), Expect = 1.070e-31
Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 0
Query:    6 PQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP---NQVGRLQKAMYGLMHAGLLW 150
            P W+ A+K E+D  +  G W +VD P GK+ +G K ++K K   DG V++YK R VAKGF Q  GI Y+E+ +P    SS+R  +AV A   W   Q+DV+ AFL  ++TEE+Y++LP G+   P   ++V RL++A+YGL  A   W
Sbjct:  551 PLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSHKVCRLRRALYGLKQAPRAW 698          
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A2N9GJZ0_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GJZ0_FAGSY)

HSP 1 Score: 129 bits (323), Expect = 1.080e-31
Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 0
Query:    6 PQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPN---QVGRLQKAMYGLMHAGLLW 150
            P W+ A+K E+D  +  G W +VD P GK+ +G K ++K K   DG V++YK R VAKGF Q  GI Y+E+ +P    SSIR  +AV A   W   Q+DV+ AFL  ++TEE+Y++LP G+   P    +V RL++A+YGL  A   W
Sbjct:  671 PLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSIRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSPKVCRLRRALYGLKQAPRAW 818          
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Match: A0A2N9GBX0_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GBX0_FAGSY)

HSP 1 Score: 129 bits (323), Expect = 1.090e-31
Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 0
Query:    6 PQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP---NQVGRLQKAMYGLMHAGLLW 150
            P W+ A+K E+D  +  G W +VD P GK+ +G K ++K K   DG V++YK R VAKGF Q  GI Y+E+ +P    SS+R  +AV A   W   Q+DV+ AFL  ++TEE+Y++LP G+   P   ++V RL++A+YGL  A   W
Sbjct:  695 PLWQQAMKEELDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSHKVCRLRRALYGLKQAPRAW 842          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig83.19685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5N6P275_9ASTR2.810e-3245.39Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9GD92_FAGSY5.820e-3242.48Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
UPI000D4648537.130e-3242.76hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
A0A2N9J752_FAGSY7.870e-3242.48Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9FVQ5_FAGSY1.020e-3143.24Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9HJ90_FAGSY1.070e-3143.24Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9HNF3_FAGSY1.070e-3143.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9FF82_FAGSY1.070e-3143.24Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9GJZ0_FAGSY1.080e-3143.92Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9GBX0_FAGSY1.090e-3143.24Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 24..150
e-value: 9.1E-34
score: 117.2
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 4..143
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig83contigF-serratus_M_contig83:345466..345918 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig83.19685.1mRNA_F-serratus_M_contig83.19685.1Fucus serratus malemRNAF-serratus_M_contig83 345253..345948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig83.19685.1 ID=prot_F-serratus_M_contig83.19685.1|Name=mRNA_F-serratus_M_contig83.19685.1|organism=Fucus serratus male|type=polypeptide|length=151bp
MSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTIFKRKVGQD
GRVEKYKCRFVAKGFRQIKGIHYQESLSPTPTQSSIRMALAVMAQLDWEG
RQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLW
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like