prot_F-serratus_M_contig83.19684.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig83.19684.1
Unique Nameprot_F-serratus_M_contig83.19684.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length187
Homology
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Match: A0A6H5JWZ4_9PHAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ4_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 3.270e-43
Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 0
Query:   96 KSAKRPRDNP-PIGLPKSMVRRIMKLGEDTRNISNEALVIVVKASEVFLEKFAARAFSHAEKVGRRTIKYQDVSDVRQEDPNLLFLEAVVPP 186
            +SAKRPRD P P+GLP SMVRRIMKLGE+TRNIS EALVIVVKASE+FLEKFAARAF HAEK+GR+TIKY+DVSDVR EDPNLLFLEAVVPP
Sbjct:  122 RSAKRPRDTPLPVGLPPSMVRRIMKLGEETRNISKEALVIVVKASEIFLEKFAARAFDHAEKLGRKTIKYRDVSDVRLEDPNLLFLEAVVPP 213          
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Match: D8LBX1_ECTSI (Histone-like transcription factor family (CBF/NF-Y) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX1_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 8.350e-42
Identity = 77/92 (83.70%), Postives = 85/92 (92.39%), Query Frame = 0
Query:   96 KSAKRPRDNP-PIGLPKSMVRRIMKLGEDTRNISNEALVIVVKASEVFLEKFAARAFSHAEKVGRRTIKYQDVSDVRQEDPNLLFLEAVVPP 186
            +SAKRPRD P P+GLP SMV+RIMKLGE+TRNIS EALVIVVKASE+FLEK AARAF HAEK+GR+TIKY+DVSDVR EDPNLLFLEAVVPP
Sbjct:  126 RSAKRPRDTPLPVGLPPSMVKRIMKLGEETRNISKEALVIVVKASEIFLEKLAARAFDHAEKLGRKTIKYRDVSDVRVEDPNLLFLEAVVPP 217          
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Match: A0A6V1PCP5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PCP5_HETAK)

HSP 1 Score: 81.3 bits (199), Expect = 3.780e-16
Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = 0
Query:  109 LPKSMVRRIMKLGEDTRNISNEALVIVVKASEVFLEKFAARAFSHAEKVGRRTIKYQDVSDVRQEDPNLLFLEAVVP 185
            LP++ V+RIMKL ++ + I+ E   +V KA+ +FLEKFA  +F+ A+  G + I+Y+DV+D R  DPNLLFLE V+P
Sbjct:   75 LPRASVKRIMKLDDEIKQINKEGTTLVEKAAVLFLEKFAQDSFAKAQTRGAKMIRYEDVADARVSDPNLLFLEGVIP 151          
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Match: A0A7S2G0X5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0X5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 6.530e-15
Identity = 35/79 (44.30%), Postives = 56/79 (70.89%), Query Frame = 0
Query:  107 IGLPKSMVRRIMKLGEDTRNISNEALVIVVKASEVFLEKFAARAFSHAEKVGRRTIKYQDVSDVRQEDPNLLFLEAVVP 185
            + +PK+ V+RIMKL +D + +  EA+++V KA+E+FLE FA  +  HA K+ R+ IKY+D+ + R  D NL FL+ ++P
Sbjct:   51 LAIPKNAVKRIMKLEDDVKQVQAEAVLLVAKATELFLESFALDSHKHAVKMERKQIKYEDLLETRVADSNLEFLKHIIP 129          
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Match: F0Y9H8_AURAN (CBFD_NFYB_HMF domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9H8_AURAN)

HSP 1 Score: 74.3 bits (181), Expect = 2.430e-14
Identity = 34/77 (44.16%), Postives = 53/77 (68.83%), Query Frame = 0
Query:  109 LPKSMVRRIMKLGEDTRNISNEALVIVVKASEVFLEKFAARAFSHAEKVGRRTIKYQDVSDVRQEDPNLLFLEAVVP 185
            +PK+ V+RIMKL  +   ++N+A+++V KA+E+FLEKF+A A + A    R T+KY+D++D    D N  FL  V+P
Sbjct:    4 IPKAAVKRIMKLDPEVNQVANDAVILVAKATEMFLEKFSAEARAQATLRSRTTVKYEDIADTVSGDKNYEFLATVIP 80          
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Match: A0A7S2UXP1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP1_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.810e-13
Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 0
Query:  109 LPKSMVRRIMKLGEDTRNISNEALVIVVKASEVFLEKFAARAFSHAEKVGRRTIKYQDVSDVRQEDPNLLFLEAVVP 185
            LPK+ VRRIMKL ++T+ ++ EA+ +  KA+E+ +EK A  +F  A+  G R I+Y+DV+  R  DPNL FL+ V+P
Sbjct:   65 LPKNAVRRIMKLDQETKTVTQEAVYLAGKATEILVEKLARDSFEQAKTRGGRMIRYEDVAKARIADPNLDFLKDVMP 141          
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Match: W7TNB3_9STRA (Histone-like transcription factor family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNB3_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 5.440e-13
Identity = 32/79 (40.51%), Postives = 56/79 (70.89%), Query Frame = 0
Query:  107 IGLPKSMVRRIMKLGEDTRNISNEALVIVVKASEVFLEKFAARAFSHAEKVGRRTIKYQDVSDVRQEDPNLLFLEAVVP 185
            + +P++ ++RIMKL  DT+ +S +A++++ KA+E+F++K A  + S A    R+TIKY+D++D R    N+ FL+ VVP
Sbjct:  118 LAIPRASIKRIMKLDPDTKQLSQDAIMVMAKATELFIDKLAKASHSMAVTNKRKTIKYEDIADARFSQKNMEFLDGVVP 196          
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Match: A0A7S3JZM4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZM4_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.150e-12
Identity = 31/81 (38.27%), Postives = 52/81 (64.20%), Query Frame = 0
Query:  106 PIGLPKSMVRRIMKLGEDTRNISNEALVIVVKASEVFLEKFAARAFSHAEKVGRRTIKYQDVSDVRQEDPNLLFLEAVVPP 186
            P+ +PK  ++RIMK+  D   ++N+A+++V KA+E+F+EK    A   A   GR+ I Y D+ + R+ D  L F+E ++PP
Sbjct:   61 PLTIPKGSIKRIMKIDGDVNQVANDAIILVAKATELFMEKLTKDAHDIATANGRKIINYNDLVNARELDSELHFMEPILPP 141          
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Match: A0A7S2RT01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT01_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 6.890e-12
Identity = 32/80 (40.00%), Postives = 56/80 (70.00%), Query Frame = 0
Query:  107 IGLPKSMVRRIMKLGEDTRNISNEALVIVVKASEVFLEKFAARAFSHAEKVGRRTIKYQDVSDVRQEDPNLL-FLEAVVP 185
            + +P++ V+RIMKL ED + +  EA+++V KA+E+FLEKFA  + + +++  R+ +KY+D+ + R  D N L FL  ++P
Sbjct:   74 VAIPRNAVKRIMKLQEDVKQVQAEAVLLVAKATELFLEKFAKDSHATSQRAERKQLKYEDLLETRLNDENTLAFLTHIIP 153          
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Match: A0A835YPZ2_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ2_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.070e-9
Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 0
Query:  107 IGLPKSMVRRIMKL-GEDTRNISNEALVIVVKASEVFLEKFAARAFSHAEKVGRRTIKYQDVSDVRQEDPNLLFLEAVVP 185
            +  PK  V+ IM+L G+D   ISNEA+ +V KASE FLEK+A   ++ A    RR I+YQD+         L+FL  VVP
Sbjct:   64 LAFPKGKVKSIMRLAGDDIEKISNEAISLVGKASECFLEKYAQDCWTVATDNRRRVIQYQDLRQTHLSSEALVFLRGVVP 143          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig83.19684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWZ4_9PHAE3.270e-4385.87CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
D8LBX1_ECTSI8.350e-4283.70Histone-like transcription factor family (CBF/NF-Y... [more]
A0A6V1PCP5_HETAK3.780e-1649.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2G0X5_9STRA6.530e-1544.30Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0Y9H8_AURAN2.430e-1444.16CBFD_NFYB_HMF domain-containing protein (Fragment)... [more]
A0A7S2UXP1_9STRA1.810e-1346.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TNB3_9STRA5.440e-1340.51Histone-like transcription factor family protein n... [more]
A0A7S3JZM4_9STRA3.150e-1238.27Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2RT01_9STRA6.890e-1240.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YPZ2_9STRA1.070e-945.00CBFD_NFYB_HMF domain-containing protein n=1 Tax=Tr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 108..168
e-value: 7.7E-16
score: 58.1
IPR009072Histone-foldGENE3D1.10.20.10coord: 79..185
e-value: 1.9E-19
score: 72.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 93..169
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 83..185
NoneNo IPR availablePANTHERPTHR10252:SF93DNA POLYMERASE EPSILON SUBUNIT Ccoord: 83..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig83contigF-serratus_M_contig83:265979..285615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig83.19684.1mRNA_F-serratus_M_contig83.19684.1Fucus serratus malemRNAF-serratus_M_contig83 265897..286716 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig83.19684.1 ID=prot_F-serratus_M_contig83.19684.1|Name=mRNA_F-serratus_M_contig83.19684.1|organism=Fucus serratus male|type=polypeptide|length=187bp
MENAQRAALGADSVTTASLSIPTVGSTLQVPTATGPAATSATGTIASEGV
VAPVASADNVAASADDGGSGGGVGGAGMKRGAETREGEEAKDRGSKSAKR
PRDNPPIGLPKSMVRRIMKLGEDTRNISNEALVIVVKASEVFLEKFAARA
FSHAEKVGRRTIKYQDVSDVRQEDPNLLFLEAVVPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold