prot_F-serratus_M_contig825.19648.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig825.19648.1
Unique Nameprot_F-serratus_M_contig825.19648.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length57
Homology
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Match: D7FJK2_ECTSI (Similar to ribosomal protein S29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK2_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.950e-34
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0
Query:    1 MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDIGFTKFS 56
            MGSKALVNSHPK FGKGGRHCRVCSNQHGLIRKYGL MCRQCFRVYAT+IGFTKFS
Sbjct:   43 MGSKALVNSHPKSFGKGGRHCRVCSNQHGLIRKYGLYMCRQCFRVYATEIGFTKFS 98          
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Match: A0A835YKD0_9STRA (Putative 40S ribosomal protein RPS29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD0_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.820e-27
Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDIGFTKFS 56
            MG+KAL NSHPK +GKGG  CRVC+NQHG+I+KYG+NMCRQCFR YA DIGF K S
Sbjct:    1 MGAKALQNSHPKAYGKGGNKCRVCANQHGIIKKYGINMCRQCFRTYAYDIGFHKLS 56          
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Match: A0A6J1U725_9SAUR (40S ribosomal protein S29 n=3 Tax=Euteleostomi TaxID=117571 RepID=A0A6J1U725_9SAUR)

HSP 1 Score: 97.8 bits (242), Expect = 8.720e-26
Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDIGFTK 54
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YA DIGFTK
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFTK 54          
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Match: A0A060XL70_ONCMY (40S ribosomal protein S29 n=2 Tax=Oncorhynchus TaxID=8016 RepID=A0A060XL70_ONCMY)

HSP 1 Score: 97.8 bits (242), Expect = 1.160e-25
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDIGFTKFS 56
            MG ++L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YA DIGF K S
Sbjct:    1 MGHQSLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYANDIGFVKAS 56          
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Match: UPI00090E0E50 (Uncharacterized protein n=1 Tax=Xenopus laevis TaxID=8355 RepID=UPI00090E0E50)

HSP 1 Score: 97.8 bits (242), Expect = 1.520e-25
Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDIGFTK 54
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YA DIGFTK
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFTK 54          
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Match: B0Z9R4_9BILA (40S ribosomal protein S29 n=2 Tax=Lineidae TaxID=6222 RepID=B0Z9R4_9BILA)

HSP 1 Score: 97.1 bits (240), Expect = 1.760e-25
Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDIGFTK 54
            MG   + NSHPKKFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YA DIGF K
Sbjct:    1 MGFANIWNSHPKKFGQGSRCCRVCSNRHGLIRKYGLNMCRQCFRQYANDIGFKK 54          
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Match: A0A673T627_SURSU (40S ribosomal protein S29 n=5 Tax=Boreoeutheria TaxID=1437010 RepID=A0A673T627_SURSU)

HSP 1 Score: 97.1 bits (240), Expect = 1.760e-25
Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDIGFTK 54
            MG + L  SHP+KFG+G R CRVCSNQHGLIRKYGLNMCRQCFR YA DIGF K
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNQHGLIRKYGLNMCRQCFRQYAKDIGFIK 54          
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Match: A0A8C4DCS4_DICLA (40S ribosomal protein S29 n=1 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4DCS4_DICLA)

HSP 1 Score: 97.1 bits (240), Expect = 2.280e-25
Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDIGFTKFS 56
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YA DIGF K S
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVKVS 56          
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Match: A0A3Q2ULG5_FUNHE (40S ribosomal protein S29 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2ULG5_FUNHE)

HSP 1 Score: 97.1 bits (240), Expect = 2.280e-25
Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDIGFTKFS 56
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YA DIGF K S
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVKVS 56          
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Match: A0A4W6F549_LATCA (40S ribosomal protein S29 n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6F549_LATCA)

HSP 1 Score: 97.1 bits (240), Expect = 2.340e-25
Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDIGFTKFS 56
            MG + L  SHP+KFG+G R CRVCSN+HGLIRKYGLNMCRQCFR YA DIGF K S
Sbjct:    1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVKVS 56          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig825.19648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJK2_ECTSI1.950e-3494.64Similar to ribosomal protein S29 n=1 Tax=Ectocarpu... [more]
A0A835YKD0_9STRA1.820e-2775.00Putative 40S ribosomal protein RPS29 n=1 Tax=Tribo... [more]
A0A6J1U725_9SAUR8.720e-2677.7840S ribosomal protein S29 n=3 Tax=Euteleostomi Tax... [more]
A0A060XL70_ONCMY1.160e-2575.0040S ribosomal protein S29 n=2 Tax=Oncorhynchus Tax... [more]
UPI00090E0E501.520e-2577.78Uncharacterized protein n=1 Tax=Xenopus laevis Tax... [more]
B0Z9R4_9BILA1.760e-2577.7840S ribosomal protein S29 n=2 Tax=Lineidae TaxID=6... [more]
A0A673T627_SURSU1.760e-2577.7840S ribosomal protein S29 n=5 Tax=Boreoeutheria Ta... [more]
A0A8C4DCS4_DICLA2.280e-2575.0040S ribosomal protein S29 n=1 Tax=Dicentrarchus la... [more]
A0A3Q2ULG5_FUNHE2.280e-2575.0040S ribosomal protein S29 n=1 Tax=Fundulus heteroc... [more]
A0A4W6F549_LATCA2.340e-2575.0040S ribosomal protein S29 n=1 Tax=Lates calcarifer... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 8..56
e-value: 3.3E-15
score: 55.6
NoneNo IPR availableGENE3D4.10.830.10coord: 1..56
e-value: 2.4E-31
score: 109.4
NoneNo IPR availablePANTHERPTHR12010:SF12coord: 1..55
IPR03974440S ribosomal protein S29/30S ribosomal protein S14 type ZPANTHERPTHR1201040S RIBOSOMAL PROTEIN S29coord: 1..55
IPR018271Ribosomal protein S14, conserved sitePROSITEPS00527RIBOSOMAL_S14coord: 22..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig825contigF-serratus_M_contig825:193960..194682 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig825.19648.1mRNA_F-serratus_M_contig825.19648.1Fucus serratus malemRNAF-serratus_M_contig825 193360..194700 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig825.19648.1 ID=prot_F-serratus_M_contig825.19648.1|Name=mRNA_F-serratus_M_contig825.19648.1|organism=Fucus serratus male|type=polypeptide|length=57bp
MGSKALVNSHPKKFGKGGRHCRVCSNQHGLIRKYGLNMCRQCFRVYATDI
GFTKFS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001209Ribosomal_S14
IPR03974440S_S29/30S_S14z
IPR018271Ribosomal_S14_CS