prot_F-serratus_M_contig813.19545.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig813.19545.1
Unique Nameprot_F-serratus_M_contig813.19545.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length312
Homology
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BLAST of mRNA_F-serratus_M_contig813.19545.1 vs. uniprot
Match: D7FT84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT84_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 8.390e-77
Identity = 142/312 (45.51%), Postives = 198/312 (63.46%), Query Frame = 0 
Query:   11 AVLCLAL-SCQAFNVPVVITS---SSRAWTLRHKLQKSYACAQRKPGQIILGMSAQRDETAVAPVNGKDASQIEESEATTS------DEPAERPRSK-------PKKRKRRAWTPEEQSYLDKIADAPIIYKRVADAEFYPSVGYESAFPTLEETLAQDYTGENTVINKDGDKEILMRVVIVGAGEEEGQFVKMLSEKGKGKLVGGMYLVWDPRVSEACEELGKVPFANIHELGTDKTRIPENVARHARFLEAHMLVAVKNQPGYPEDYIPRLKEASLQVGLTFVGPGIAEEVSNGDLTAFEELVRGTRAAV 305
            A+ C AL SC+AF+ PV  TS   S R  + R + Q+ Y   +R    + +   A  +    APV       +EE  AT +        P ++  SK       PK +K+R  TP+EQ YLDK+A APIIYKR  + EFYPSVGYES++PTLEE+L + YTG++  + +DG +E+LMRVV+VG  E EG+F+K L+EKG+GKLV G+Y +WDPR     E +  +   N+HELG  K + P+ VA+HA FL A+MLVAV   P Y +D++P+LK+A+L  G+TFVGP +A EV+ GD+ +F +LV  TR A+
Sbjct:    8 AIFCCALTSCRAFHTPVTTTSGRMSVRRESSRAQ-QECYRSGRRPRSSLSMKKEATAEGVTDAPV-------VEEGSATATAASKADGTPEKKMMSKQDLYEKQPKPQKKRTLTPQEQQYLDKMASAPIIYKRNPEQEFYPSVGYESSYPTLEESLKEGYTGDSIAVGEDGKEEVLMRVVVVGGREAEGEFLKNLAEKGRGKLVDGLYALWDPREGPVPETIANIDLINVHELGFAKNQDPKEVAKHAYFLAANMLVAVSKHPLYGDDFVPQLKKAALDNGVTFVGPDLAAEVARGDMESFTKLVEATRKAL 311
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig813.19545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT84_ECTSI8.390e-7745.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 310..311
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..311
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.919
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig813contigF-serratus_M_contig813:239649..249355 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig813.19545.1mRNA_F-serratus_M_contig813.19545.1Fucus serratus malemRNAF-serratus_M_contig813 239240..249415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig813.19545.1 ID=prot_F-serratus_M_contig813.19545.1|Name=mRNA_F-serratus_M_contig813.19545.1|organism=Fucus serratus male|type=polypeptide|length=312bp
MPWQMLSVGIAVLCLALSCQAFNVPVVITSSSRAWTLRHKLQKSYACAQR
KPGQIILGMSAQRDETAVAPVNGKDASQIEESEATTSDEPAERPRSKPKK
RKRRAWTPEEQSYLDKIADAPIIYKRVADAEFYPSVGYESAFPTLEETLA
QDYTGENTVINKDGDKEILMRVVIVGAGEEEGQFVKMLSEKGKGKLVGGM
YLVWDPRVSEACEELGKVPFANIHELGTDKTRIPENVARHARFLEAHMLV
AVKNQPGYPEDYIPRLKEASLQVGLTFVGPGIAEEVSNGDLTAFEELVRG
TRAAVASASVQ*
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