prot_F-serratus_M_contig808.19477.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig808.19477.1
Unique Nameprot_F-serratus_M_contig808.19477.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length132
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig808.19477.1 vs. uniprot
Match: D7G8S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8S9_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 6.200e-47
Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 0 
Query:   31 MDNSSLTQSERESMKVRGFFPKLIHFVKNHGGWLFNLVFAHLLFWLFGFTALLEYGYSDLNQDEYGQIKSGPSGSGVGIITTLLCAAATIIVIVKFVSH 129
            MDN+SLTQS+RE++ V+GF P ++HFVKN+GGW+FNLVFAHLLFWLFGFTALLE+GYSDLNQD  GQIKSGPSGSGVGIITTLL A  T++V+ K + +
Sbjct:    1 MDNASLTQSQREALIVKGFGPTMVHFVKNNGGWMFNLVFAHLLFWLFGFTALLEFGYSDLNQDSSGQIKSGPSGSGVGIITTLLMAVGTLVVVAKAIRY 99
[Close]
BLAST of mRNA_F-serratus_M_contig808.19477.1 vs. uniprot
Match: A0A7S2KAR8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAR8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 6.950e-14
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 0 
Query:   56 FVKNHGGWLFNLVFAHLLFWLFGFTALLEYGYSDLNQDEYGQIKSGPSGSGVGIITTLLCAAATIIVIVKFVSH 129
            F+K+  GW  N   AH+LFWL+GF  L EYGYS+    E G I SGP GSG GI+T L+    +++ + K VSH
Sbjct:   10 FLKSQPGWALNFTLAHVLFWLYGFPDLSEYGYSN-TFSEQGNIPSGPLGSGGGIVTLLIVCVMSLVWLQKLVSH 82
[Close]
BLAST of mRNA_F-serratus_M_contig808.19477.1 vs. uniprot
Match: A0A6U4K512_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4K512_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.610e-9
Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 0 
Query:   59 NHGGWLFNLVFAHLLFWLFGFTALLEYGYSDLNQDEYGQ-------IKSGPSGSGVGIITTLLCAAATIIVI 123
            ++GGW    V  H+LFW++GFTA+ E+GY+D N+ + G        + SGPSGSGV +I+  L    T+I I
Sbjct:   40 SNGGWTMLFVLGHILFWVYGFTAINEFGYTDSNKYDEGPTDLGTGGVASGPSGSGVFMISLFLVIPITLIYI 111
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig808.19477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8S9_ECTSI6.200e-4773.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2KAR8_9STRA6.950e-1448.65Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6U4K512_9STRA3.610e-943.06Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 88..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..131
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig808contigF-serratus_M_contig808:254857..264108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig808.19477.1mRNA_F-serratus_M_contig808.19477.1Fucus serratus malemRNAF-serratus_M_contig808 254857..264108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig808.19477.1 ID=prot_F-serratus_M_contig808.19477.1|Name=mRNA_F-serratus_M_contig808.19477.1|organism=Fucus serratus male|type=polypeptide|length=132bp
EGRSRRGGFCTFGLGSPLYRSAPLLEDQREMDNSSLTQSERESMKVRGFF
PKLIHFVKNHGGWLFNLVFAHLLFWLFGFTALLEYGYSDLNQDEYGQIKS
GPSGSGVGIITTLLCAAATIIVIVKFVSHVV*
back to top