prot_F-serratus_M_contig807.19470.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig807.19470.1
Unique Nameprot_F-serratus_M_contig807.19470.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length516
Homology
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Match: D7FHU3_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU3_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 2.020e-51
Identity = 92/146 (63.01%), Postives = 114/146 (78.08%), Query Frame = 0
Query:  180 AEVEVLKMIEFYFGDSNYGWDRFMQGKAGKMGEGLMDIPILLTFNKLKIIVKKAGLDQDAAKAMVARAAESSEKIRLSEDKAQIGRVTPMTEEGISERMGRTVQTKGYKKDAKMKIEDVEKLFEETGKAVYVKICRAGRSRSKLTS 325
            AE   LKM+EFYFGDSN+GWDRFMQ KAGKMGE LMDI +L+TFNKLK IVKKA L  +  +A++AR  E+S  +R+SEDK QIGR   MTEE   ER+ RTVQTKGY K++ +KIEDVEKLF + GKA YVKIC+AG ++ + ++
Sbjct:   52 AETAALKMLEFYFGDSNFGWDRFMQNKAGKMGENLMDISVLMTFNKLKNIVKKADLSPEEGQALIARMGEASPSLRVSEDKKQIGRAAAMTEEAGKERIARTVQTKGYPKESSIKIEDVEKLFSDAGKANYVKICKAGGNKLRTST 197          
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Match: D7FZL9_ECTSI (XRRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL9_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 1.300e-40
Identity = 90/162 (55.56%), Postives = 114/162 (70.37%), Query Frame = 0
Query:  325 SIFVEFETKEAADLACERSEQYSHNGDAITVRKAHGDTEGNDNKNDATAEAEEPKGPSYEPGKILHVTGIPESGVSRESLREAMDPYGKVLYVEFSFGNNEAWLRMENASEATAAVEGTQE-GGVTLAAEVEDKGALVILQGDAEKEYYDRLEKARSERNSR 485
            SIFVEF+ KEAA+ A  RSE Y + G+ I VR A  D E        TA A EP    YE GKI+H+ GIPESGVSRESL+ A++ +G  LYV+FSFG  EAW+RM+N +EA A V G +E  G+TLAAEVEDKG + +++G  EK+YYDR+EK R+ER +R
Sbjct:  108 SIFVEFDKKEAAEKAIARSEDYFYEGEPIAVRPARSDEE---RAAAHTAPAPEPL--VYEAGKIIHIAGIPESGVSRESLKNAVESFGTALYVDFSFGGREAWIRMQNPAEAAATVSGAKETDGLTLAAEVEDKGTVSLVEGAEEKDYYDRMEKMRAERLNR 264          
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Match: A0A6H5JNF3_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF3_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.440e-19
Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 0
Query:  179 EAEVEVLKMIEFYFGDSNYGWDRFMQGKAGKMGEGLMDIPILLTFNKLKIIVKKAGLDQDAAKAMV 244
            EAE   LKM+EFYFGDSN+GWDRFMQ KAGKMGE LMDI +L+TFNKLK IVKKA L  + A+A+V
Sbjct:  224 EAETAALKMLEFYFGDSNFGWDRFMQNKAGKMGEKLMDISVLMTFNKLKNIVKKADLSPEEAQALV 289          
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Match: A0A7S1XER7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XER7_9RHOD)

HSP 1 Score: 92.0 bits (227), Expect = 2.570e-16
Identity = 88/319 (27.59%), Postives = 147/319 (46.08%), Query Frame = 0
Query:  180 AEVEVLKMIEFYFGDSNYGWDRFMQGKAGKMGEGLMDIPILLTFNKLKIIVKKAGLDQDAAKAMVARAAESSEKIRLSEDKAQIGRVTPMTEEGISERMGRTVQTKGYKKDA-KMKIEDVEKLFEETGKAVYVKICRAGRSRSK---LTSIFVEFETKEAA---------------DLACERSEQYSHNGDAITVRKAHGDTEGNDNKNDATAEAEEPKGPSYEPGKILHVTGIPESGVSRESLREAMDPYGKVLYVEFSFGNNEAWLRMENASEATAAVEGTQEGGVTLAAEVEDKGALVILQGDAEKEYYDRLEKAR 479
            +E  V   + FYF DSN   D+F+  K  K  +G +D+ IL  F +++       L+      +   +  SS  + LSED+ +I R+ P+ ++  S    RTV+ +G+     +  +ED+  LF   G  + +++ R+  S  +   + S FVE  + + A               D       Q       +   + H  TE N   + ++ +   P  PSY+PG IL   G+   GVSRE +RE ++P G V +V++     + + R   AS+A AA    QE    L  +V       IL GD E EY++++E ++
Sbjct:   40 SEDRVWAQLHFYFSDSNLPRDKFLLEKVRKDPDGYVDLSILCDFKRMR------QLESSPEGVVKIFSERSSHDLVLSEDRKRIRRIRPIPDDAKSVAFKRTVRVRGWPYGGPEPSLEDLFPLFGAHGSVLSIRLHRSKGSEGETLFVGSAFVELCSPDDAKSFAKAKIKIPGSSEDFEISSPSQLVEERKQLADARRHVKTEDNA-PSGSSGQVTAP--PSYDPGLILRYEGV-GPGVSREDIRELLEPLGDVRWVDYGRDEADGFARFSKASDAQAACAELQERKSELGGKVPQWS---ILAGDEEMEYWNKVESSK 345          
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Match: UPI001898C917 (lupus La protein-like n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI001898C917)

HSP 1 Score: 90.9 bits (224), Expect = 2.810e-16
Identity = 84/308 (27.27%), Postives = 148/308 (48.05%), Query Frame = 0
Query:  181 EVEVLKMIEFYFGDSNYGWDRFMQGKAGKMGEGLMDIPILLTFNKLKIIVKKAGLDQDAAKAMVARAAESSEKIRLSEDKAQI----GRVTPMTEEGISERMGR-TVQTKGYKKDAKMKIEDVEKLFEETGKAVYVKICRAGRSRSKLTSIFVEFETKEAADLACERSEQYSHNGDAITVRKAHGDTEGNDNKNDATAEAEEPKGPSYEP----GKILHVTGIPESGVSRESLREAMDPYGKVLYVEFSFGNNEAWLRMENASEATAAVEGTQEGGVTLAAEVEDKGALVILQGDAEKEYYDRLEKAR 479
            EV ++K +E+YFGD N   D+F+QG+  K+ +G + I +LL FN+LK +  K  +  +A +        +S+ + +++D  ++     R  P   E   +++   +V  +G+   A   I+++ + F + G  V V + R   +R+   S+F  F TKE AD    +      + +     K       ++      AE E   G + EP    G +L + G+ +   + ES+REA++P+ KV +V++  G  EA LR      A A +      G  L  +  D  A   L+GD E EY+ ++  A+
Sbjct:   15 EVSIIKQVEYYFGDFNLSRDKFLQGEI-KLDDGWVAIEVLLAFNRLKRLTDKGNVVVEALRK------STSQLLEINDDGTKVRRSPARPVPENSEEHKKKLDELSVFVRGFPPTAT--IDELLEFFGQFGDCVGVFMRRYRNTRAFRGSVFATFSTKEEADAFLAKESVKFDDMELTRFIKQGRQARQDEKAKKEAAEMEVEGGYADEPEIVLGCLLRIKGLGQD-TTWESVREAIEPFAKVAFVDYPRGQTEAVLRFVEEGSAKAVLAKLDSHGKGLNIDGNDVTAEA-LEGDEEVEYWKKVAAAK 311          
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Match: G3ML08_AMBMU (Uncharacterized protein n=3 Tax=Amblyomma TaxID=6942 RepID=G3ML08_AMBMU)

HSP 1 Score: 90.1 bits (222), Expect = 8.460e-16
Identity = 91/332 (27.41%), Postives = 160/332 (48.19%), Query Frame = 0
Query:  181 EVEVLKMIEFYFGDSNYGWDRFMQGKAGKMGEGLMDIPILLTFNKLKIIVKKAGLDQDAAKAMVARAAESSEKIRLSEDKAQIGR--VTPMTEEGISERMGR---TVQTKGYKKDAKMKIEDVEKLFEETGKAVYVKICRAGRSRSKLTSIFVEFETKEAAD------------LACERSEQYSHNGDAITVRKAHGDTEGND---NKNDATAEAEEPKGPSYEPGKILHVTGIPESGVSRESLREAMDPYGKVLYVEFSFGNNEAWLRMENASEATAAVEGTQEGGVTLAAEVEDKGALVILQGDAEKEYYDRLEKARSERNSRNNNGFRG 492
            + +++K +E+YFGD N   D+F+QGK  K  +G + I  LLTFN+LK +  +  +  +A K        +++ + +S D  +I R    P+ + G  ER      TV  KG+       I+++ + F + G+ + V + R   +R    S+F  F TK  A+            L  +RS +  +       R+A  + +      N+      +EE +      G +L VTG+ +   +RE+L++A++PY  + +V++S GN +A LR      A A +   +  G  L  +  D  A  + +GD E EY+ +L  A+ ++ +R   G RG
Sbjct:   17 DAKIIKQVEYYFGDFNLPRDKFLQGKV-KEDDGWVTIETLLTFNRLKSLTTEENVVAEALKK------STNQLLEVSSDGKKIRRSPAKPLPD-GDKERQKLDELTVYAKGFPPTTT--IDELLEFFGQFGQCINVFMRRFPGNRKFKGSVFATFATKAEAEAFIAKEGLKFNELELKRSMKVDYVARKKEERQARLEEKAKKKAANQGSGADASEEAEAEDVVLGCLLRVTGLGDK-TTRETLKQAVEPYATLAFVDYSRGNPDAILRFVEEGSAQAVLAKLEAQGEGLKVDGCDVTATAV-EGDEELEYWKKLAAAKRDKKNRFKRGQRG 336          
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Match: A0A6M2DCZ8_9NEOP (Putative rna-binding protein la n=1 Tax=Xenopsylla cheopis TaxID=163159 RepID=A0A6M2DCZ8_9NEOP)

HSP 1 Score: 87.8 bits (216), Expect = 5.640e-15
Identity = 81/320 (25.31%), Postives = 156/320 (48.75%), Query Frame = 0
Query:  179 EAEVEVLKMIEFYFGDSNYGWDRFMQGKAGKMGEGLMDIPILLTFNKLKIIVKKAGLDQDAAKAMVARAAESSEKIRLSEDKAQI----GRVTP-MTEEGISERMGRTVQTKGYKKDAKM-KIEDVEKLFEETGKAVY-VKICRAGRSRSKLTSIFVEFETKEAA--------------DLACERSEQYSHNGDAITVRKAHGDTEGNDNKNDATAEAEEPKGPSYEPGKILHVTGIPESGVSRESLREA-MDPYGKVLYVEFSFGNNEAWLRMENASEATAAVEGTQEGGVTLA-AEVEDKGALVILQGDAEKEYYDRL 475
            E E  +++ +E+YFGD+N   D+F+Q +  K+ +G + + +LLTF +L  +     +     KA++     +++ + +SED+++I    GR  P M EE  +E +GRT+  KG+  D+K+  I D  K ++     +    + +A +      S+F  F  KE A              DL C     Y        ++K+ G  + N + N        P       G ++H+ G+PE+  +RE ++E  +D   ++ YV++  G+   W+R+ N   A   ++  ++G + +  AEV  +    +L+G+ E ++ D++
Sbjct:   68 ELEKNIIRQVEYYFGDNNLPRDKFLQEQI-KLDDGWVSLTVLLTFKRLSSMTTNQEV---IIKALLK---STNDLLEISEDRSKIRRSLGRPIPQMNEERRAELVGRTLYVKGFPLDSKLDSILDFFKNYDFVENVIMRTYVDKATKEHGFKGSVFATFAKKEQAEKFLEIEKVTYLDQDLVCMFQNDY------YKMKKSAGKPKNNPSNNSMNDTLRPPN------GTVIHLEGLPENA-TREDIKEVFIDLDAEIAYVDYQKGDKAGWIRLHNEDSAKEIIKKIKDGKLEICKAEVTTR----LLEGEEETKFLDKV 363          
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Match: A0A6L2PMQ3_COPFO (Uncharacterized protein (Fragment) n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2PMQ3_COPFO)

HSP 1 Score: 86.7 bits (213), Expect = 6.470e-15
Identity = 95/324 (29.32%), Postives = 163/324 (50.31%), Query Frame = 0
Query:  183 EVLKMIEFYFGDSNYGWDRFMQGKAGKMGEGLMDIPILLTFNKLKIIVKKAGLDQDAAKAMVARAAESSEKIRLSEDKAQIGR-----VTPMTEEGISERMGRTVQTKGYKKDAKMKIEDVEKLFEETGKA--VYVKICRAGRSRSKLT--SIFVEFETKEAADLACERSE-QYSH-------NGDAITVRKAHGDTEGNDNKNDATAEAEEPKGPSYE----PGKILHVTGIPESGVSRESLREAMDPYG-KVLYVEFSFGNNEAWLRMENASEATAAVEGTQEGGVTLA-AEVEDKGALVILQGDAEKEYYDRLEKARSERN 483
            ++++ IE+YFGD N   DRF+Q +  K+ +G + + I+LTF +L  +  +  +        V  A E+S+ I +S+DK +I R     +  M EE   E M RTV  KG+ +D    ++++ + F   G    V+++  +   +R  +   S+FV F++KE A+   ++   +YS          D I  +K   D     +K       ++   P  E     G +LH+ G   S  +RE +R+ +   G  V++V+F  G +EAW+R++  + +   VE  ++  +TL  AEVE +     L+GD E E+   LEKA +E N
Sbjct:   18 QIVRQIEYYFGDINLPKDRFLQEQI-KLEDGWIPLEIMLTFKRLANLTTEPDV--------VVTALETSKLIEVSDDKKKIRRSPNAPLPEMNEERRQELMSRTVYCKGFPRDDTT-LDNLLEFFSSYGSVENVHMRTFKEKVTRKVVFKGSVFVLFKSKELAEEFLKKDAVKYSDIELIRKWQSDYIESKKKECDKNAKRSKKTKQGNQQQTAPPVKELNLPKGAVLHLQGT-NSDTTREIIRKTLVEEGLDVVFVQFCTGCSEAWVRLQGENSSKEYVEKLKDRKLTLCGAEVEVR----CLEGDEEAEF---LEKAVNEIN 323          
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Match: A0A7S0ZBA1_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBA1_9RHOD)

HSP 1 Score: 86.3 bits (212), Expect = 1.730e-14
Identity = 102/351 (29.06%), Postives = 144/351 (41.03%), Query Frame = 0
Query:  184 VLKMIEFYFGDSNYGWDRFMQGKAGKMGEGLMDIPILLTFNKLKIIVKKAGLDQDAAKAMVARAAESSEKIRLSEDKAQIGRVTPMTEEGISERMGRTVQTKGYKK-----DAKMKIEDVEKLFEETGKAVYVKICRA---------------------------GRSRSKLT-SIFVEFETKEAAD-LACERSEQYSHNGDA------------ITVRKAHGDTEGNDNKNDATAEAEEPKGP----------SYEPGKILHVTGIPESGVSRESLREAMDPYGKVLYVEFSFGNNEAWLRMENASEA---TAAVEGTQEGGVTLAAEVEDKGALVILQGDAEKEYYDRL 475
            V K IE+YF DSN   D F++ +  K   G + I  LL FN+L  +     L  D+ K        +S  + LS+D + + RVTP+    +S    RTV   G+ K     D +  IE++E LF   GK + VK  RA                           G  +   T S+FVE E+ EAA  +  ER E    + DA            +   +A   T GN+ K                        YE G +L V  I E GV RE ++E ++ YG V YVEF  G   A +R   A  A      +E  ++ G  L      +  + +L GD EK Y+ +L
Sbjct:   32 VQKQIEYYFSDSNLPRDPFLKAEINKDPNGFVSIQTLLKFNRLASLTTDTSLIADSIK--------NSSLLALSDDGSSMKRVTPLP--AVSLWKSRTVCVSGFPKCVKGDDHEPDIEEIEALFAPYGKVLSVKRRRAPVQEGADDENDKDGDGENVEEKEKVVEGEKKVLFTGSVFVEMESAEAASRVVVERLEWKKSDEDAAIELKVMSFKDHVLHERAARPTSGNNKKEKXXXXXXXXXXXXXXXXXXXXDGYEVGMLLCVENIGE-GVRREDIKEKLEEYGAVAYVEFEQGGKSATVRFGEADVAEKVAGEMEKKKKEGENLMQLGGSEVEMRVLGGDEEKMYWMKL 371          
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Match: UPI001E1D2BBE (la-related protein 7 n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI001E1D2BBE)

HSP 1 Score: 84.3 bits (207), Expect = 5.660e-14
Identity = 81/311 (26.05%), Postives = 137/311 (44.05%), Query Frame = 0
Query:  183 EVLKMIEFYFGDSNYGWDRFMQGKAGKMGEGLMDIPILLTFNKLKIIVKKAGLDQDAAKAMVARAAESSEKIRLSEDKAQIGRVTPMTEEGISERMGRTVQTKGYKKDAKMKIEDVEKLFEETGKAVYVKICRAGRSRSKLTSIFVEFETKEAADLACERSEQYSHNGD-----AITVRKAHGDTEGN-------------DNKNDATAEAEEPKGPSYEPGKILHVTGIPESGVSRESLREAMDPYGKVLYVEFSFGNNEAWLRMENASEATAAVEGTQEGGVTLAAEVEDKGALVILQGDAEKEYYDRL 475
            +++K ++F+FGD+N   DRF++ +  K  +G +DI +L++FNK+K +     L        +ARA +SS  + L  +  +I R  P+ E    E   RTV  +   K+       +E++F + G  VY+ I     +       FVEFETKE A  A E +E+    GD     +   RK                      N  +   +     GP +  G I+ +    ES   R+ +R+ +    +V+YV+   G+ E  +R    ++A A +    E         +    L IL GD E+ Y+ ++
Sbjct:   37 DIVKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKL--------IARALKSSAVVELDLEGTRIRRKNPLGERPKDEDE-RTVYVELLPKNVNHSW--IERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIESTEEEKDTGDKDGSLSKAKRKXXXXXXXXXXMGEEVIPLRVLSNNEECRPQEANAMGPQFVSGVIVKILSA-ESLPGRKLVRDTLAAISEVVYVDLLEGDTECHVRFRTPADAQAVISAYPE------ISKKHNWKLEILSGDHEQRYWQKI 329          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig807.19470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHU3_ECTSI2.020e-5163.01HTH La-type RNA-binding domain-containing protein ... [more]
D7FZL9_ECTSI1.300e-4055.56XRRM domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JNF3_9PHAE1.440e-1972.73HTH La-type RNA-binding domain-containing protein ... [more]
A0A7S1XER7_9RHOD2.570e-1627.59Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
UPI001898C9172.810e-1627.27lupus La protein-like n=1 Tax=Dermacentor silvarum... [more]
G3ML08_AMBMU8.460e-1627.41Uncharacterized protein n=3 Tax=Amblyomma TaxID=69... [more]
A0A6M2DCZ8_9NEOP5.640e-1525.31Putative rna-binding protein la n=1 Tax=Xenopsylla... [more]
A0A6L2PMQ3_COPFO6.470e-1529.32Uncharacterized protein (Fragment) n=1 Tax=Coptote... [more]
A0A7S0ZBA1_9RHOD1.730e-1429.06Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
UPI001E1D2BBE5.660e-1426.05la-related protein 7 n=1 Tax=Echinops telfairi Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..92
NoneNo IPR availablePANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 177..513
NoneNo IPR availablePANTHERPTHR22792:SF118LUPUS LA PROTEIN HOMOLOGcoord: 177..513
IPR002344Lupus La proteinPRINTSPR00302LUPUSLAcoord: 187..204
score: 47.98
coord: 213..228
score: 30.11
coord: 274..290
score: 28.88
coord: 322..340
score: 30.62
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 388..455
e-value: 0.042
score: 18.9
coord: 260..356
e-value: 0.11
score: 15.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 387..457
score: 8.621
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 280..360
score: 8.996
IPR006630La-type HTH domainSMARTSM00715lacoord: 178..266
e-value: 2.1E-6
score: 26.8
IPR006630La-type HTH domainPROSITEPS50961HTH_LAcoord: 174..273
score: 17.301
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 176..273
e-value: 4.8E-17
score: 63.6
IPR014886La protein, RNA-binding domainPFAMPF08777RRM_3coord: 386..489
e-value: 2.7E-14
score: 53.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 375..491
e-value: 1.9E-22
score: 81.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 289..374
e-value: 3.7E-8
score: 35.5
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 293..442
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 179..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig807contigF-serratus_M_contig807:175382..190805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig807.19470.1mRNA_F-serratus_M_contig807.19470.1Fucus serratus malemRNAF-serratus_M_contig807 174520..190885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig807.19470.1 ID=prot_F-serratus_M_contig807.19470.1|Name=mRNA_F-serratus_M_contig807.19470.1|organism=Fucus serratus male|type=polypeptide|length=516bp
MSTAEDGMKREKREREEDADAEEHAQEADVSTVKRAKADKMEKGDKEEEV
KMDGQQDSSSSRPIINNNGDKMQEEEEEESKVQQEGDDKIEEEKKMDEKE
KMEKVLEEVGDGKEKEDAKDEGSTMVEVIREETTQKKEEEVTVTSAASIE
VDASAKKDDAEATCGKKDEVVEESLTKEEAEVEVLKMIEFYFGDSNYGWD
RFMQGKAGKMGEGLMDIPILLTFNKLKIIVKKAGLDQDAAKAMVARAAES
SEKIRLSEDKAQIGRVTPMTEEGISERMGRTVQTKGYKKDAKMKIEDVEK
LFEETGKAVYVKICRAGRSRSKLTSIFVEFETKEAADLACERSEQYSHNG
DAITVRKAHGDTEGNDNKNDATAEAEEPKGPSYEPGKILHVTGIPESGVS
RESLREAMDPYGKVLYVEFSFGNNEAWLRMENASEATAAVEGTQEGGVTL
AAEVEDKGALVILQGDAEKEYYDRLEKARSERNSRNNNGFRGRGRGRGRG
RRGRGGGRGGRGRGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002344Lupus_La
IPR000504RRM_dom
IPR006630La_HTH
IPR036388WH-like_DNA-bd_sf
IPR014886La_RRM
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
IPR036390WH_DNA-bd_sf