prot_F-serratus_M_contig807.19468.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig807.19468.1
Unique Nameprot_F-serratus_M_contig807.19468.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length378
Homology
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Match: D7FWB7_ECTSI (RABLI1, a divergent Ectocarpus-specific RAB-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB7_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 1.460e-58
Identity = 103/195 (52.82%), Postives = 122/195 (62.56%), Query Frame = 0
Query:  177 ATWGVAERPLSALFKILVLGNHGVGKTTLVLALSGKTFRPKCTPGLTVQVTARSYYRQGHPPAVLEFWDVPASLKTVMWQNVVSGASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSCAGIFPPPFIAIGTKIDVSPASQCSFMKEARDWCEGQGCPLLFCASFTGDGITTLLRHIVSACFETHPSPEV 371
            A W VA RP SALFKILVLG++GVGKT L  AL GK F P+ +P   V V+ARS+ R   PPAVLE WD+PAS KT +   + +  SC LL+ D+DDR SFR+ KRW S + EA SG+   P       P FI +GTKID    S        R WCE QG PLLFC SF G+GI  +LR +V  CFE HP P V
Sbjct:   12 AAWTVAGRPPSALFKILVLGDNGVGKTALARALCGKGFLPEYSPDTAVSVSARSFSRDKFPPAVLEIWDIPASAKTSLGPEIAAETSCALLLLDLDDRNSFRVAKRWQSLVTEACSGSKARP-------PHFIVVGTKIDRGGCSTWMRCAGVRGWCEEQGYPLLFCTSFAGEGIMGILREVVVTCFERHPPPAV 199          
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Match: A0A7N0UP32_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UP32_KALFE)

HSP 1 Score: 68.6 bits (166), Expect = 9.850e-10
Identity = 49/153 (32.03%), Postives = 74/153 (48.37%), Query Frame = 0
Query:  189 LFKILVLGNHGVGKTTLVLALSGKTFRP--KCTPGLTVQVTARSYYRQGHPPAVLEFWDVPASLK-TVMWQNVVSGASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSCAGIFPPPFIAIGTKIDVS-PASQCSFMKEARDWCEGQG 337
            L K++VLG+ GVGKT+L+     K FR   K T G    VT        H    L+ WD     +   +      GA C +LV+DV+   SF   ++WH   ++        P     FP  F+ IG K+DV    ++ + M++AR+WC+ +G
Sbjct:    8 LLKVIVLGDSGVGKTSLMNQYVNKKFREQYKATIGADF-VTKELQVDDKH--VTLQIWDTAGQERFQSLGAAFYRGADCCVLVYDVNAPKSFETLRKWHEEFLKQ-----ADPVDPSTFP--FVVIGNKVDVEGEKNRMNNMRKAREWCDSRG 150          
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Match: A0A7C0YB71_THOAR (GTP-binding protein n=1 Tax=Thorarchaeota archaeon (strain OWC) TaxID=2053491 RepID=A0A7C0YB71_THOAR)

HSP 1 Score: 67.0 bits (162), Expect = 1.880e-9
Identity = 47/185 (25.41%), Postives = 81/185 (43.78%), Query Frame = 0
Query:  189 LFKILVLGNHGVGKTTLVLALSGKTFRPKCTPGLTVQVTARSYYRQGHPPAVLEFWDVPASLK-TVMWQNVVSGASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSCAGIFPPPFIAIGTKIDVSPASQCSFMKEARDWCEGQGCPLLFCASFTGDGITTLLRHIVSACFETHPSPEVP 372
            ++KIL++G+  VGK++L+  L    F P  T  + V ++A +       P +L   D+      + +      GA     V+D+  R SF     WH  ++E  +   G    A       + IG K D +   + S  +E  ++ EG G P +  ++ TG+ + T    I     E +P P +P
Sbjct:    5 VYKILLVGDANVGKSSLIRRLLLGEFDPDYTATVGVDLSAAALNLDESTPVILTLIDLGGQADFSALRSQYYRGAHLAAFVYDISSRESFEHLPFWHKGVMENVTTVDGKAVLA-------MLIGNKSDRADKREVS-AEEGANFAEGLGIPFMETSAKTGENVETTFTEIARMALERYPPPRMP 181          
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Match: A0A1S4CLM0_TOBAC (ras-related protein Rab7-like n=17 Tax=Solanaceae TaxID=4070 RepID=A0A1S4CLM0_TOBAC)

HSP 1 Score: 66.6 bits (161), Expect = 4.470e-9
Identity = 48/163 (29.45%), Postives = 76/163 (46.63%), Query Frame = 0
Query:  184 RPLSALFKILVLGNHGVGKTTLVLALSGKTFRPKCTPGLTVQVTARSYYRQGHPPAVLEFWDVPA-----SLKTVMWQNVVSGASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSCAGIFPP---PFIAIGTKIDVSPAS-QCSFMKEARDWCEGQG 337
            +PL +L K++VLG+ GVGKT+LV     K FR +    +      +         A L+ WD        SL    ++    GA C +LV+DV+   SF   + WH   ++           A +  P   PF+ IG K+D+   S +    K+A++WC+ +G
Sbjct:    3 KPLRSLIKVIVLGDCGVGKTSLVNQYVFKKFRQQYKATIGADFATKEL-EIDERVATLQIWDTAGQERFHSLGVAFYR----GADCCILVYDVNVPKSFETLQHWHEEFIKQ----------ADLTEPEKFPFVLIGNKVDLEGGSIETVSEKKAKEWCDSRG 150          
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Match: A0A4V6A2B1_POPAL (Ras-related protein Rab7-like n=9 Tax=Saliceae TaxID=238069 RepID=A0A4V6A2B1_POPAL)

HSP 1 Score: 65.9 bits (159), Expect = 6.830e-9
Identity = 56/167 (33.53%), Postives = 78/167 (46.71%), Query Frame = 0
Query:  183 ERPLSALFKILVLGNHGVGKTTLVLALSGKTFRP--KCTPGLT-----VQVTARSYYRQGHPPAVLEFWDVPASLKTVMWQNVVS----GASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSCAGIFPPPFIAIGTKIDVSP-ASQCSFMKEARDWCEGQG 337
            E P  AL K++VLG+ GVGKT+L+     K F    K T G       VQ+ A+           L+ WD     +   +Q++ S    GA C +LV+DV+ + SF +   WH   V+        P     FP  FI  G KIDV   +S+    K AR+WC  +G
Sbjct:    2 EMPRRALLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKEVQIDAKL--------VTLQIWDTAGQER---FQSLGSAFYRGADCCVLVYDVNIQKSFEILNNWHKEFVKQ-----ADPVDPEAFP--FILFGNKIDVDGGSSRVVSEKTAREWCASRG 150          
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Match: A0A5C3KGP2_9AGAR (Rab small monomeric GTPase n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3KGP2_9AGAR)

HSP 1 Score: 65.5 bits (158), Expect = 8.970e-9
Identity = 45/158 (28.48%), Postives = 71/158 (44.94%), Query Frame = 0
Query:  185 PLSALFKILVLGNHGVGKTTLVLALSGKTFRPKCTPGLTVQVTARSYYRQGHPPAVLEFWDVPA-----SLKTVMWQNVVSGASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSCAGIFPPPFIAIGTKIDVSPASQCSFMKEARDWCEGQG 337
            P SAL K+++LG+ GVGKT+L+     K F  +    +      +    +  P   ++ WD        SL    ++    GA C +LVFDV+   SF+  + W    +   S     P     FP  F+ +G K+DV  + +    K A  WC+ +G
Sbjct:    3 PRSALLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVETEERP-VTMQLWDTAGQERFQSLGVAFYR----GADCCVLVFDVNSSKSFQALESWRDEFLIQSS-----PHEPEEFP--FVVLGNKVDVDESKRQVTQKRALAWCQAKG 148          
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Match: A0A022QC23_ERYGU (Uncharacterized protein n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QC23_ERYGU)

HSP 1 Score: 65.5 bits (158), Expect = 9.270e-9
Identity = 48/159 (30.19%), Postives = 74/159 (46.54%), Query Frame = 0
Query:  185 PLSALFKILVLGNHGVGKTTLVLALSGKTFRPKCTPGLTVQVTARSYYRQGHPPAVLEFWDVPA-----SLKTVMWQNVVSGASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSCAGIFPPPFIAIGTKIDVSPASQCSFMK-EARDWCEGQG 337
            P  +L KI++LG+ GVGKT+L+     K FRP+    +      +  +  G     L+ WD        SL    ++    GA C +LV+DV+   SF   + WH   ++  +     PS    FP  F+ IG K+DV   +     K  A +WC+ +G
Sbjct:    4 PKRSLRKIILLGDSGVGKTSLMNQYITKKFRPQYKSTIGADFVTKEVHI-GDKLVTLQIWDTAGQERFQSLGVAFYR----GADCCILVYDVNVLKSFETIQNWHQDFLKQVN-----PSNPETFP--FVLIGNKVDVDGGNSRVVDKTRAENWCKSKG 150          
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Match: A0A2K2ADQ2_POPTR (Uncharacterized protein n=1 Tax=Populus trichocarpa TaxID=3694 RepID=A0A2K2ADQ2_POPTR)

HSP 1 Score: 65.5 bits (158), Expect = 1.040e-8
Identity = 49/155 (31.61%), Postives = 74/155 (47.74%), Query Frame = 0
Query:  188 ALFKILVLGNHGVGKTTLVLALSGKTFRPKCTPGLTVQVTARSYYRQGHPPAVLEFWDVPASLKTVMWQNVVS----GASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSCAGIFPPPFIAIGTKIDVSP-ASQCSFMKEARDWCEGQG 337
            AL K++VLG+ GVGKT+L+     K F  +    +      +   +       L+ WD     +   +Q++ S    GA C +LV+DV+ + SF     WH   V+        P+  G FP  FI  G KIDV   +S+    K+AR+WC  +G
Sbjct:    7 ALLKVIVLGDIGVGKTSLMNQYVYKKFSQQYKSTIGADFVTKEL-QIDDKLVTLQIWDTAGQER---FQSLGSAFYRGADCCVLVYDVNIQKSFETLNNWHEEFVKQ----AADPADPGAFP--FILFGNKIDVDGGSSRVVSEKKAREWCASRG 151          
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Match: A0A3B1IQ02_ASTMX (Ras-related protein Rab-7a-like n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1IQ02_ASTMX)

HSP 1 Score: 65.5 bits (158), Expect = 1.080e-8
Identity = 46/156 (29.49%), Postives = 71/156 (45.51%), Query Frame = 0
Query:  191 KILVLGNHGVGKTTLVLALSGKTFRPKCTPGLTVQVTARSYYRQGHPPAVLEFWDVPASLKTV-MWQNVVSGASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSCAGIFPPPFIAIGTKIDVSPASQCSFMKEARDWCEGQGCPLLFCAS 345
            K++++GN GVGKT+L+       F       + V    +      +   +L+ WD   S +   +   +  GA C LLVFD+   +SFR    W S ++     A   P+  G FP  FI +G K D+     CS  +  + WCEG G     C++
Sbjct:   17 KVVLVGNSGVGKTSLMTRFVDHRFTNMYRATIGVDFLTKELTVDKNT-VILQLWDTAGSERFFSLGSALYRGAHCCLLVFDLGSDSSFRALDGWISEVLLQTDPAD--PAERGTFP--FIVVGNKTDLQTRQVCS--ERVQQWCEGLGAEYFECSA 165          
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Match: A0A7J7DFY7_TRIWF (Ras-related protein Rab7 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7DFY7_TRIWF)

HSP 1 Score: 65.1 bits (157), Expect = 1.260e-8
Identity = 48/156 (30.77%), Postives = 70/156 (44.87%), Query Frame = 0
Query:  188 ALFKILVLGNHGVGKTTLVLALSGKTFRPKCTPGLTVQVTARSYYRQGHPPAVLEFWDVPA-----SLKTVMWQNVVSGASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSCAGIFPPPFIAIGTKIDVSPA-SQCSFMKEARDWCEGQG 337
            AL KI+VLG+ GVGKTTL+     K F  +    +      +   +       L+ WD        SL    ++    GA C +LV+DV+   SF   + WH   ++        P+    FP  F+ +G KID+    S+    K+ARDWC   G
Sbjct:    9 ALLKIIVLGDSGVGKTTLMNQYVYKKFSQQYKATIGADFVTKEL-QIDDKLVTLQIWDTAGQERFQSLGVAFYR----GADCCVLVYDVNIHKSFETLRNWHEEFIKQ-----ADPADPDAFP--FVLLGNKIDIDGGNSRVVSEKKARDWCASNG 152          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig807.19468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWB7_ECTSI1.460e-5852.82RABLI1, a divergent Ectocarpus-specific RAB-like G... [more]
A0A7N0UP32_KALFE9.850e-1032.03Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A7C0YB71_THOAR1.880e-925.41GTP-binding protein n=1 Tax=Thorarchaeota archaeon... [more]
A0A1S4CLM0_TOBAC4.470e-929.45ras-related protein Rab7-like n=17 Tax=Solanaceae ... [more]
A0A4V6A2B1_POPAL6.830e-933.53Ras-related protein Rab7-like n=9 Tax=Saliceae Tax... [more]
A0A5C3KGP2_9AGAR8.970e-928.48Rab small monomeric GTPase n=1 Tax=Coprinopsis mar... [more]
A0A022QC23_ERYGU9.270e-930.19Uncharacterized protein n=2 Tax=Erythranthe guttat... [more]
A0A2K2ADQ2_POPTR1.040e-831.61Uncharacterized protein n=1 Tax=Populus trichocarp... [more]
A0A3B1IQ02_ASTMX1.080e-829.49Ras-related protein Rab-7a-like n=2 Tax=Astyanax m... [more]
A0A7J7DFY7_TRIWF1.260e-830.77Ras-related protein Rab7 n=1 Tax=Tripterygium wilf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 190..211
score: 39.29
coord: 304..317
score: 29.91
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 190..361
e-value: 2.5E-6
score: -30.7
NoneNo IPR availableGENE3D3.40.50.300coord: 183..368
e-value: 5.0E-29
score: 102.8
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..377
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..116
NoneNo IPR availablePROSITEPS51419RABcoord: 183..377
score: 10.659
IPR001806Small GTPasePFAMPF00071Rascoord: 191..361
e-value: 1.3E-14
score: 54.1
IPR020849Small GTPase superfamily, Ras-typePANTHERPTHR24070FAMILY NOT NAMEDcoord: 190..361
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 188..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig807contigF-serratus_M_contig807:113586..148385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig807.19468.1mRNA_F-serratus_M_contig807.19468.1Fucus serratus malemRNAF-serratus_M_contig807 112409..152415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig807.19468.1 ID=prot_F-serratus_M_contig807.19468.1|Name=mRNA_F-serratus_M_contig807.19468.1|organism=Fucus serratus male|type=polypeptide|length=378bp
MDREEKSEEKVENTGPYEKTTFPPGEYVGDFNDILLEWPTVPCDTELCCC
CINAGIFETIRIREESIRTPCSFVFSKGINAERNANFGGCSRLMLLGRAG
WRVCLLMAFLPLALPFRTCAQHRSIRDLYPVGSRAKSGIMSRVKAALCFP
VSLAKHVAFLSERQQEGNLRYSWQTRATWGVAERPLSALFKILVLGNHGV
GKTTLVLALSGKTFRPKCTPGLTVQVTARSYYRQGHPPAVLEFWDVPASL
KTVMWQNVVSGASCTLLVFDVDDRTSFRMTKRWHSSIVEAYSGAGGTPSC
AGIFPPPFIAIGTKIDVSPASQCSFMKEARDWCEGQGCPLLFCASFTGDG
ITTLLRHIVSACFETHPSPEVPTNPSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras-type
IPR027417P-loop_NTPase