prot_F-serratus_M_contig805.19459.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig805.19459.1
Unique Nameprot_F-serratus_M_contig805.19459.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length527
Homology
BLAST of mRNA_F-serratus_M_contig805.19459.1 vs. uniprot
Match: D7FZW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW0_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 3.700e-29
Identity = 89/170 (52.35%), Postives = 100/170 (58.82%), Query Frame = 0
Query:    7 RGGVFGPGGGIGRGGMGMASAFGHPDGPVGYG----RRHSTGGAAARNGXXXXXXXXXXXXXXXXTGGRSARKRGRGDWKKSYDVIASVDKKG------TGDSGEGEDGDSKYASFREFPIDMRPQPGDVLAFKTLSLNEEKWTPELSAYREATVVAFDPATDRVALSPS 166
            RGGVFGPG GIGRGGMGM    G   G  GY     RRHSTG  A  NG                  G SA+KRGRG WKK Y+VIASV+ K          +G  E+GD++Y  + E P DMRPQ  DVLAFKTLSLNEE WTPELS YR A V AFD ++  V L P+
Sbjct:   85 RGGVFGPGRGIGRGGMGMTRGGGAAGG--GYANKNTRRHSTGDTA--NGD-----------------GGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENGDARYVVYEELPTDMRPQVCDVLAFKTLSLNEETWTPELSPYRTAEVTAFDTSSGLVRLLPA 233          
BLAST of mRNA_F-serratus_M_contig805.19459.1 vs. uniprot
Match: A0A6H5L4H0_9PHAE (Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H0_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 5.540e-25
Identity = 162/431 (37.59%), Postives = 192/431 (44.55%), Query Frame = 0
Query:    8 GGVFGPGGGIGRGGMGMASAFGHPDGPVG--YGRRHSTGGAAARNGXXXXXXXXXXXXXXXXTGGRSARKRGRGDWKKSYDVIASVDKKG------TGDSGEGEDGDSKYASFREFPIDMRPQPGDVLAFKTLSLNEEKWTPELSAYREATVVAFDPATDRVALSPSVEPAAKVDVDKQPEREERNPTEIAPQETAEPAAEPASDAHDNTPAAGGKSGESSGQSLSSGNTRAMDVGQMAGGDDESEKKEQAPAETGSVEGESALVDGEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGFAVQGTIDQSSFTGADGRAAAPPAGGGERSRGEGETDNSGVDGVDGGLENKEGVEWIEYSTLSNVRLIRGPSVRELEKRKDAVIRWNSLEPAG 430
            GGVFGPG      GMGM    G   G       RRHSTG  A  NG                  G SA+KRGRG WKK Y+VIASV+ K          +G  E+ D++Y  + E P DMRPQ  DVLAFKTLSLNEE WTPELS YR A V+AFD ++  V L P                                    AS   DN    G  SG     +  +  T+   VGQ   G           AE+ + EG     +G  E                  XXXXXXXXXXXXXXXXXXXXXXXXXXX                      G + + T D        GR  A     GE            V G +   E +EG E +EYS+L+NVR++RGPS+ EL+KRK A+ +WNSL P G
Sbjct:  547 GGVFGPGXXXXXXGMGMTRGGGFAGGRYADRNTRRHSTGHTA--NGD-----------------GGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRP------------------------------------ASTEDDNKDGGGAGSG-----AFVNDCTKGHTVGQQQQG------SSSIIAESNTEEGSVPTSNGHNEGGFGGDSKGMEYPAAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------------------GVSAEPTTD--------GRNKARSTSSGE------------VGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGPGG 870          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig805.19459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZW0_ECTSI3.700e-2952.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4H0_9PHAE5.540e-2537.59Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=8... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024822CoilinPANTHERPTHR15197COILIN P80coord: 107..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig805contigF-serratus_M_contig805:300394..303074 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig805.19459.1mRNA_F-serratus_M_contig805.19459.1Fucus serratus malemRNAF-serratus_M_contig805 300270..303239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig805.19459.1 ID=prot_F-serratus_M_contig805.19459.1|Name=mRNA_F-serratus_M_contig805.19459.1|organism=Fucus serratus male|type=polypeptide|length=527bp
MKGVNGRGGVFGPGGGIGRGGMGMASAFGHPDGPVGYGRRHSTGGAAARN
GGGRGQAKGGGPTRRGGTGGRSARKRGRGDWKKSYDVIASVDKKGTGDSG
EGEDGDSKYASFREFPIDMRPQPGDVLAFKTLSLNEEKWTPELSAYREAT
VVAFDPATDRVALSPSVEPAAKVDVDKQPEREERNPTEIAPQETAEPAAE
PASDAHDNTPAAGGKSGESSGQSLSSGNTRAMDVGQMAGGDDESEKKEQA
PAETGSVEGESALVDGEGEDGEIKGESALANGEGEDGEVKGESALADGEG
EDGEVKGESALADGEGERGEVKEESALAGGEGEGGEGFAVQGTIDQSSFT
GADGRAAAPPAGGGERSRGEGETDNSGVDGVDGGLENKEGVEWIEYSTLS
NVRLIRGPSVRELEKRKDAVIRWNSLEPAGHGKSDVVSAASGAETTATPL
SVETPAGNGNSKGETPRGKASPSPKSGGGKWKGKGKRKSNSRGTFAVGKL
ARIMAEASGKSATGGVSGTGSAPSST*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024822Coilin